Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052466.1 Olea europaea HOM05D007878 ORTHO05D010022 6.7e-240 833.9 535 100.0
Oeu052465.1 Olea europaea HOM05D007878 ORTHO05D010022 3.3e-239 831.6 535 99.8
Oeu047269.3 Olea europaea HOM05D007878 ORTHO05D010022 2.3e-123 446.8 508 64.2
Cc04_g14870 Coffea canephora HOM05D007878 ORTHO05D010022 3.6e-76 290.0 565 38.4
Oeu031812.2 Olea europaea HOM05D007878 ORTHO05D010022 3.0e-70 270.4 548 40.5
Actinidia04859 Actinidia chinensis HOM05D007878 ORTHO05D010022 6.2e-68 262.7 568 36.1
Oeu046990.1 Olea europaea HOM05D007878 ORTHO05D010022 2.4e-64 250.8 516 44.4
Peaxi162Scf00274g00029 Petunia axillaris HOM05D007878 ORTHO05D010022 2.1e-60 237.7 551 41.9
Nitab4.5_0001211g0090 Nicotiana tabacum HOM05D007878 ORTHO05D010022 3.6e-60 236.9 503 45.3
Nitab4.5_0002756g0040 Nicotiana tabacum HOM05D007878 ORTHO05D010022 4.7e-60 236.5 557 42.2
Actinidia09234 Actinidia chinensis HOM05D007878 ORTHO05D010022 8.1e-60 235.7 566 34.1
Dinv38757 Davidia involucrata HOM05D007878 ORTHO05D010022 3.1e-59 233.8 590 41.4
PGSC0003DMG400024662 Solanum tuberosum HOM05D007878 ORTHO05D010022 4.0e-59 233.4 559 42.0
Sopen03g034610 Solanum pennellii HOM05D007878 ORTHO05D010022 5.3e-59 233.0 560 41.1
Potri.015G061500 Populus trichocarpa HOM05D007878 ORTHO05D010022 2.6e-58 230.7 564 34.4
CAN.G479.49 Capsicum annuum HOM05D007878 ORTHO05D010022 5.8e-58 229.6 556 38.7
Solyc03g115620.2 Solanum lycopersicum HOM05D007878 ORTHO05D010022 1.7e-57 228.0 560 41.8
Duzib084G0698 Durio zibethinus HOM05D007878 ORTHO05D010022 2.2e-57 227.6 597 33.5
PGR083G0831 Punica granatum HOM05D007878 ORTHO05D010022 3.9e-54 216.9 588 39.1
Thecc.03G095300 Theobroma cacao HOM05D007878 ORTHO05D010022 2.5e-53 214.2 590 38.8
Nn4g23313 Nelumbo nucifera HOM05D007878 ORTHO05D010022 3.6e-52 210.3 594 33.5
Cfa019282 Carpinus fangiana HOM05D007878 ORTHO05D010022 8.1e-52 209.1 562 32.9
Manes.14G082500 Manihot esculenta HOM05D007878 ORTHO05D010022 7.6e-50 202.6 588 37.6
RcHm_v2.0_Chr7g0182231 Rosa chinensis HOM05D007878 ORTHO05D010022 2.9e-49 200.7 603 36.0
Atru.chr9.783 Acer truncatum HOM05D007878 ORTHO05D010022 3.8e-49 200.3 570 33.5
Ciclev10024608m.g Citrus clementina HOM05D007878 ORTHO05D010022 1.1e-48 198.7 531 33.3
FAN08G0929 Fragaria x ananassa HOM05D007878 ORTHO05D010022 1.9e-48 198.0 568 30.8
Gohir.A03G068300 Gossypium hirsutum HOM05D007878 ORTHO05D010022 5.4e-48 196.4 560 31.1
TAR374G1173 Trochodendron aralioides HOM05D007878 ORTHO05D010022 1.2e-47 195.3 577 32.1
DCAR_016585 Daucus carota HOM05D007878 ORTHO05D010022 4.6e-47 193.4 546 31.7
Gohir.D03G094900 Gossypium hirsutum HOM05D007878 ORTHO05D010022 1.0e-46 192.2 560 30.9
FAN13G2185 Fragaria x ananassa HOM05D007878 ORTHO05D010022 4.3e-45 186.8 604 30.0
Gorai.003G099100 Gossypium raimondii HOM05D007878 ORTHO05D010022 9.6e-45 185.7 519 31.8
Manes.06G088500 Manihot esculenta HOM05D007878 ORTHO05D010022 2.8e-44 184.1 587 37.1
Prupe.5G199300 Prunus persica HOM05D007878 ORTHO05D010022 8.1e-44 182.6 617 29.8
CiPaw.11G048800 Carya illinoinensis HOM05D007878 ORTHO05D010022 1.4e-43 181.8 565 31.5
FAN18G1316 Fragaria x ananassa HOM05D007878 ORTHO05D010022 1.7e-41 174.9 604 28.8
Glyma.17G103300 Glycine max HOM05D007878 ORTHO05D010022 2.9e-41 174.1 557 38.8
GSVIVG01007952001 Vitis vinifera HOM05D007878 ORTHO05D010022 7.1e-40 169.5 479 39.9
Phvul.003G187300 Phaseolus vulgaris HOM05D007878 ORTHO05D010022 1.6e-39 168.3 562 29.7
Haze_07666 Corylus avellana HOM05D007878 ORTHO05D010022 4.6e-39 166.8 495 36.2
CANSAT80G1712 Cannabis sativa HOM05D007878 ORTHO05D010022 1.6e-36 158.3 567 29.6
MD14G1206000 Malus domestica HOM05D007878 ORTHO05D010022 8.2e-36 156.0 568 30.3
Cpa.g.sc13.307 Carica papaya HOM05D007878 ORTHO05D010022 4.0e-35 153.7 301 37.5
FvH4_5g14430 Fragaria vesca HOM05D007878 ORTHO05D010022 4.0e-35 153.7 604 30.1
Aqoxy3G03537 Aquilegia oxysepala HOM05D007878 ORTHO05D010022 6.9e-35 152.9 603 31.7
COL.COLO4_38427 Corchorus olitorius HOM05D007878 ORTHO05D010022 2.0e-34 151.4 573 34.7
Nn3g17364 Nelumbo nucifera HOM05D007878 ORTHO05D010022 2.0e-34 151.4 290 36.2
TWI60G1109 Tripterygium wilfordii HOM05D007878 ORTHO05D010022 1.0e-33 149.1 584 33.6
CiPaw.11G048500 Carya illinoinensis HOM05D007878 ORTHO05D010022 4.9e-33 146.7 561 29.6
Migut.I00229 Erythranthe guttata HOM05D007878 ORTHO05D010022 6.5e-33 146.4 548 29.9
Sed0013205 Sechium edule HOM05D007878 ORTHO05D010022 7.1e-32 142.9 564 31.2
Medtr4g109150 Medicago truncatula HOM05D007878 ORTHO05D010022 1.6e-31 141.7 557 29.8
Lj4g0012809 Lotus japonicus HOM05D007878 ORTHO05D010022 3.5e-31 140.6 548 29.6
Ca_21797_v3 Cicer arietinum L. HOM05D007878 ORTHO05D010022 1.8e-30 138.3 498 29.5
PSO063G3897 Papaver somniferum HOM05D007878 ORTHO05D010022 3.9e-30 137.1 570 27.5
MELO3C017199.2 Cucumis melo HOM05D007878 ORTHO05D010022 3.3e-29 134.0 555 28.3
DCAR_026030 Daucus carota HOM05D000094 ORTHO05D003883 3.7e-28 130.6 263 36.1
CsaV3_1G002630 Cucumis sativus L. HOM05D007878 ORTHO05D010022 9.0e-27 125.9 559 26.7
ClCG06G015920 Citrullus lanatus HOM05D007878 ORTHO05D010022 5.9e-26 123.2 561 27.6
MBI16_g14990_MAGBIO Magnolia biondii HOM05D007878 ORTHO05D010022 8.5e-25 119.4 588 27.4
QL10p018347 Quercus lobata HOM05D007878 ORTHO05D010022 9.4e-24 115.9 519 31.0
TPR.G1999 Trifolium pratense HOM05D007878 ORTHO05D010022 6.1e-23 113.2 553 36.5
arahy.Tifrunner.gnm1.ann1.3W98EY Arachis hypogaea HOM05D007878 ORTHO05D010022 1.5e-21 108.6 567 26.8
Eucgr.B00555 Eucalyptus grandis HOM05D007878 ORTHO05D010022 3.7e-20 104.0 488 33.4
CSS0029238 Camellia sinensis var. sinensis HOM05D000957 ORTHO05D000754 1.4e-19 102.1 490 27.8
MSTRG.22991 Avicennia marina HOM05D007878 ORTHO05D010022 2.6e-18 97.8 134 50.7
arahy.Tifrunner.gnm1.ann1.QT4JJ4 Arachis hypogaea HOM05D007878 ORTHO05D010022 1.0e-17 95.9 495 25.5
MD06G1198500 Malus domestica HOM05D007878 ORTHO05D010022 5.0e-17 93.6 559 24.7
ATR0730G174 Amborella trichopoda HOM05D007878 ORTHO05D010022 8.5e-17 92.8 604 34.4
ECA246G4297 Erigeron canadensis HOM05D007878 ORTHO05D010022 1.1e-16 92.4 535 28.0
HanXRQChr05g0157141 Helianthus annuus HOM05D007878 ORTHO05D010022 3.9e-14 84.0 493 27.4
Atru.chr9.308 Acer truncatum HOM05D007878 ORTHO05D010022 5.1e-14 83.6 214 32.7
Lsat_1_v5_gn_5_21161 Lactuca sativa HOM05D007878 ORTHO05D010022 5.1e-14 83.6 262 31.3
DCAR_021514 Daucus carota HOM05D007878 ORTHO05D010022 4.2e-08 63.9 328 27.7
Psat4g049000 Pisum sativum HOM05D007878 ORTHO05D010022 3.0e-06 57.8 547 23.4
arahy.Tifrunner.gnm1.ann1.H3BYSM Arachis hypogaea HOM05D007878 ORTHO05D010022 5.2e-06 57.0 130 37.7


User provided reference genes

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