Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052450.2 Olea europaea HOM05D007763 ORTHO05D009537 2.0e-141 507.3 742 100.0
MSTRG.11374 Avicennia marina HOM05D007763 ORTHO05D009537 5.6e-43 180.3 131 63.4
Migut.I00207 Erythranthe guttata HOM05D007763 ORTHO05D009537 1.2e-42 179.1 129 64.3
SGA_v2.0_scaffold25G10931 Striga asiatica HOM05D007763 ORTHO05D009537 1.6e-42 178.7 130 62.3
Actinidia04871 Actinidia chinensis HOM05D007763 ORTHO05D009537 4.6e-37 160.6 128 57.0
Dinv38739 Davidia involucrata HOM05D007763 ORTHO05D001128 1.5e-35 155.6 131 57.3
Hma1.2p1_0060F.1_g033520 Hydrangea macrophylla HOM05D007763 ORTHO05D009537 6.2e-34 150.2 123 60.2
TWI60G1313 Tripterygium wilfordii HOM05D007763 ORTHO05D009537 5.8e-32 143.7 123 55.3
Lsat_1_v5_gn_5_21540 Lactuca sativa HOM05D007763 ORTHO05D009537 1.4e-30 139.0 123 55.3
Cc04_g15160 Coffea canephora HOM05D007763 ORTHO05D009537 3.2e-30 137.9 109 59.6
PGR031G2821 Punica granatum HOM05D007763 ORTHO05D009537 4.2e-30 137.5 128 52.3
Prupe.5G197300 Prunus persica HOM05D007763 ORTHO05D009537 2.7e-29 134.8 127 52.0
Atru.chr12.1670 Acer truncatum HOM05D007763 ORTHO05D009537 3.5e-29 134.4 127 51.2
Ciclev10024595m.g Citrus clementina HOM05D007763 ORTHO05D009537 6.0e-29 133.7 123 52.0
TAR622G0770 Trochodendron aralioides HOM05D007763 ORTHO05D009537 6.0e-29 133.7 111 56.8
Lj9C466T13 Lonicera japonica HOM05D007763 ORTHO05D009537 7.9e-29 133.3 109 56.9
Rhsim08G0152400 Rhododendron simsii HOM05D000001 ORTHO05D010304 1.3e-28 132.5 103 61.2
Sc12g0006490 Simmondsia chinensis HOM05D007763 ORTHO05D009537 6.6e-28 130.2 127 51.2
Thecc.03G093400 Theobroma cacao HOM05D007763 ORTHO05D009537 6.6e-28 130.2 123 48.8
COL.COLO4_36930 Corchorus olitorius HOM05D007763 ORTHO05D009537 2.5e-27 128.3 127 46.5
AUR62021645 Chenopodium quinoa HOM05D007763 ORTHO05D009537 3.3e-27 127.9 119 50.4
Duzib205G0970 Durio zibethinus HOM05D007763 ORTHO05D009537 3.3e-27 127.9 126 46.0
Gohir.A03G067600 Gossypium hirsutum HOM05D007763 ORTHO05D009537 7.3e-27 126.7 126 46.0
Cfa018915 Carpinus fangiana HOM05D007763 ORTHO05D009537 1.3e-26 125.9 123 47.2
ClCG09G020450 Citrullus lanatus HOM05D007763 ORTHO05D009537 2.8e-26 124.8 128 46.1
Gorai.003G098200 Gossypium raimondii HOM05D007763 ORTHO05D009537 2.8e-26 124.8 124 45.2
Oeu039786.1 Olea europaea HOM05D016989 ORTHO05D009537 2.8e-26 124.8 134 81.3
CSS0022156 Camellia sinensis var. sinensis HOM05D007763 ORTHO05D009537 6.2e-26 123.6 109 54.1
Gohir.D03G094100 Gossypium hirsutum HOM05D007763 ORTHO05D009537 1.4e-25 122.5 124 44.4
Sed0000161 Sechium edule HOM05D007763 ORTHO05D009537 1.8e-25 122.1 127 45.7
HanXRQChr08g0236691 Helianthus annuus HOM05D007763 ORTHO05D009537 4.0e-25 120.9 111 53.2
Manes.14G081200 Manihot esculenta HOM05D007763 ORTHO05D009537 4.0e-25 120.9 102 56.9
Nn2g12476 Nelumbo nucifera HOM05D007763 ORTHO05D009537 4.0e-25 120.9 111 52.3
QL10p017571 Quercus lobata HOM05D007763 ORTHO05D009537 4.0e-25 120.9 107 53.3
PSO017G0499 Papaver somniferum HOM05D007763 ORTHO05D009537 6.9e-25 120.2 115 49.6
GSVIVG01007974001 Vitis vinifera HOM05D007763 ORTHO05D010304 1.2e-24 119.4 110 51.8
Haze_07298 Corylus avellana HOM05D007763 ORTHO05D010304 2.0e-24 118.6 112 46.4
MELO3C025502.2 Cucumis melo HOM05D007763 ORTHO05D009537 3.8e-23 114.4 122 41.0
DCAR_002300 Daucus carota HOM05D007763 ORTHO05D009537 1.9e-22 112.1 99 51.5
LjContig00102g0005353 Lotus japonicus HOM05D000001 ORTHO05D010304 1.2e-21 109.4 115 40.9
EL10Ac5g11053 Beta vulgaris HOM05D014602 ORTHO05D009537 1.6e-21 109.0 101 48.5
CsaV3_5G025970 Cucumis sativus L. HOM05D007763 ORTHO05D009537 1.6e-21 109.0 122 40.2
Oeu006405.1 Olea europaea HOM05D016989 ORTHO05D009537 2.7e-21 108.2 106 82.1
CDE04G3021 Ceratophyllum demersum HOM05D007763 ORTHO05D000003 3.5e-21 107.8 115 42.6
RcHm_v2.0_Chr7g0181881 Rosa chinensis HOM05D007763 ORTHO05D009537 3.9e-20 104.4 101 55.4
Oeu064348.1 Olea europaea HOM05D016989 ORTHO05D009537 5.1e-20 104.0 155 50.3
Aqoxy3G00480 Aquilegia oxysepala HOM05D007763 ORTHO05D009537 1.9e-19 102.1 105 45.7
Oeu041437.1 Olea europaea HOM05D019688 ORTHO05D009537 1.9e-19 102.1 89 60.7
Peaxi162Scf00013g00410 Petunia axillaris HOM05D007763 ORTHO05D009537 1.9e-19 102.1 93 55.9
AUR62008445 Chenopodium quinoa HOM05D007763 ORTHO05D009537 2.5e-19 101.7 127 40.2
Hund02629 Selenicereus undatus HOM05D007763 ORTHO05D019789 3.3e-19 101.3 73 57.5
Aqoxy2G01348 Aquilegia oxysepala HOM05D007763 ORTHO05D009537 5.6e-19 100.5 113 42.5
FAN13G0255 Fragaria x ananassa HOM05D007763 ORTHO05D009537 5.6e-19 100.5 99 50.5
Phvul.009G185566 Phaseolus vulgaris HOM05D007763 ORTHO05D009537 9.6e-19 99.8 114 43.0
THA.LOC104801471 Tarenaya hassleriana HOM05D007763 ORTHO05D009537 9.6e-19 99.8 122 40.2
FvH4_5g14610 Fragaria vesca HOM05D007763 ORTHO05D009537 2.1e-18 98.6 99 49.5
FAN18G1924 Fragaria x ananassa HOM05D007763 ORTHO05D009537 2.1e-18 98.6 99 49.5
Ah.02g113700 Amaranthus hybridus HOM05D007763 ORTHO05D009537 2.8e-18 98.2 126 40.5
arahy.Tifrunner.gnm1.ann1.PFL66H Arachis hypogaea HOM05D007763 ORTHO05D009537 1.8e-17 95.5 107 43.9
arahy.Tifrunner.gnm1.ann1.NWYI6Z Arachis hypogaea HOM05D000001 ORTHO05D010304 2.4e-17 95.1 107 43.9
Psat5g201000 Pisum sativum HOM05D007763 ORTHO05D009537 1.2e-16 92.8 81 43.2
Carub.0008s2207 Capsella rubella HOM05D007763 ORTHO05D009537 4.5e-16 90.9 118 38.1
CARHR275160 Cardamine hirsuta HOM05D007763 ORTHO05D009537 4.5e-16 90.9 127 34.6
Thhalv10005336m.g Eutrema salsugineum HOM05D007763 ORTHO05D009537 4.5e-16 90.9 126 36.5
MBI02_g14230_MAGBIO Magnolia biondii HOM05D007763 ORTHO05D011706 5.8e-16 90.5 120 41.7
Oeu005317.1 Olea europaea HOM05D016989 ORTHO05D009537 1.0e-15 89.7 93 64.5
Ca_14664_v3 Cicer arietinum L. HOM05D007763 ORTHO05D009537 1.7e-15 89.0 115 38.3
TPR.G11825 Trifolium pratense HOM05D007763 ORTHO05D009537 2.9e-15 88.2 107 42.1
Solyc06g069700.4 Solanum lycopersicum HOM05D007763 ORTHO05D009537 1.4e-14 85.9 71 60.6
Sopen06g027000 Solanum pennellii HOM05D007763 ORTHO05D009537 1.4e-14 85.9 71 60.6
AL8G38070 Arabidopsis lyrata HOM05D007763 ORTHO05D009537 2.5e-14 85.1 118 35.6
Zm00001eb312410 Zea mays HOM05D007763 ORTHO05D009537 2.5e-14 85.1 83 45.8
AT5G61400 Arabidopsis thaliana HOM05D007763 ORTHO05D009537 3.2e-14 84.7 118 35.6
Aa31LG11G2020 Aethionema arabicum HOM05D007763 ORTHO05D009537 5.5e-14 84.0 118 34.7
Os09g0417500 Oryza sativa ssp. japonica HOM05D007763 ORTHO05D009537 1.6e-13 82.4 79 48.1
BcaC04g23450 Brassica carinata HOM05D007763 ORTHO05D009537 4.6e-13 80.9 126 34.9
BcaNung06902 Brassica carinata HOM05D007763 ORTHO05D009537 4.6e-13 80.9 126 34.1
C09p08190 Brassica napus HOM05D007763 ORTHO05D009537 4.6e-13 80.9 126 34.9
BolC9t53731H Brassica oleracea HOM05D007763 ORTHO05D009537 4.6e-13 80.9 126 34.9
Lalb_Chr08g0235511 Lupinus albus HOM05D007763 ORTHO05D009537 3.0e-12 78.2 77 45.5
Nitab4.5_0004286g0010 Nicotiana tabacum HOM05D007763 ORTHO05D009537 8.7e-12 76.6 50 58.0
BcaC04g23452 Brassica carinata HOM05D007763 ORTHO05D009537 1.1e-11 76.3 123 33.3
CAN.G587.9 Capsicum annuum HOM05D007763 ORTHO05D009537 1.5e-11 75.9 61 67.2
BraA09t36381Z Brassica rapa HOM05D007763 ORTHO05D009537 1.9e-11 75.5 126 34.9
Oeu060348.1 Olea europaea HOM05D016989 ORTHO05D009537 2.5e-11 75.1 65 66.2
PGR042G2810 Punica granatum HOM05D005764 ORTHO05D006600 4.3e-11 74.3 142 29.6
Oeu009039.1 Olea europaea HOM05D019688 ORTHO05D009537 1.3e-10 72.8 51 70.6
Nitab4.5_0003021g0070 Nicotiana tabacum HOM05D007763 ORTHO05D009537 1.6e-10 72.4 47 57.4
Oeu062358.1 Olea europaea HOM05D019688 ORTHO05D009537 5.3e-09 67.4 71 54.9
FAN25G3383 Fragaria x ananassa HOM05D007956 ORTHO05D010152 6.9e-09 67.0 118 31.4
ATR1127G168 Amborella trichopoda HOM05D007763 ORTHO05D009537 1.2e-08 66.2 80 36.2
MD06G1131900 Malus domestica HOM05D005764 ORTHO05D006600 1.5e-08 65.9 134 32.1
FvH4_5g09340 Fragaria vesca HOM05D005764 ORTHO05D006600 4.5e-08 64.3 118 32.2
Prupe.5G142900 Prunus persica HOM05D005764 ORTHO05D006600 7.6e-08 63.5 118 31.4
Thhalv10003592m.g Eutrema salsugineum HOM05D005764 ORTHO05D006600 1.0e-07 63.2 105 34.3
Sc19g0004680 Simmondsia chinensis HOM05D007340 ORTHO05D008979 1.0e-07 63.2 100 33.0
CiPaw.11G052700 Carya illinoinensis HOM05D005764 ORTHO05D006600 1.7e-07 62.4 109 32.1
AL8G38750 Arabidopsis lyrata HOM05D005764 ORTHO05D006600 2.9e-07 61.6 108 32.4
Oeu033193.1 Olea europaea HOM05D019688 ORTHO05D009537 2.9e-07 61.6 173 38.2
AUR62010965 Chenopodium quinoa HOM05D007340 ORTHO05D008979 3.8e-07 61.2 115 28.7
FAN21G4014 Fragaria x ananassa HOM05D007956 ORTHO05D010152 3.8e-07 61.2 115 29.6
SEGI_07640 Sequoiadendron giganteum HOM05D007763 ORTHO05D009537 3.8e-07 61.2 119 31.9
arahy.Tifrunner.gnm1.ann1.TF3CHY Arachis hypogaea HOM05D000981 ORTHO05D000845 5.0e-07 60.8 109 30.3
Cc00_g12250 Coffea canephora HOM05D005764 ORTHO05D006600 5.0e-07 60.8 137 29.9
Haze_07107 Corylus avellana HOM05D005764 ORTHO05D006600 5.0e-07 60.8 133 28.6
Hund00538 Selenicereus undatus HOM05D006819 ORTHO05D008763 5.0e-07 60.8 134 34.3
MD14G1148300 Malus domestica HOM05D005764 ORTHO05D006600 1.1e-06 59.7 134 30.6
Oeu008858.1 Olea europaea HOM05D016989 ORTHO05D009537 1.4e-06 59.3 30 90.0
ATR1089G063 Amborella trichopoda HOM05D008483 ORTHO05D010726 1.9e-06 58.9 102 32.4
FvH4_3g02620 Fragaria vesca HOM05D007956 ORTHO05D010152 1.9e-06 58.9 93 32.3
Peaxi162Scf01229g00021 Petunia axillaris HOM05D007455 ORTHO05D009431 1.9e-06 58.9 61 41.0
Oeu057528.1 Olea europaea HOM05D016989 ORTHO05D009537 2.5e-06 58.5 29 93.1
BcaB03g12921 Brassica carinata HOM05D007639 ORTHO05D009509 3.2e-06 58.2 98 32.7
ATR1127G166 Amborella trichopoda HOM05D007358 ORTHO05D009117 4.2e-06 57.8 98 29.6
Carub.0008s2268 Capsella rubella HOM05D005764 ORTHO05D006600 4.2e-06 57.8 105 31.4
RcHm_v2.0_Chr5g0003911 Rosa chinensis HOM05D007956 ORTHO05D010152 4.2e-06 57.8 118 27.1
ATR1127G165 Amborella trichopoda HOM05D007763 ORTHO05D009537 5.5e-06 57.4 55 38.2
Aqoxy2G01977 Aquilegia oxysepala HOM05D000001 ORTHO05D000003 7.2e-06 57.0 109 31.2
Cc03_g02890 Coffea canephora HOM05D007340 ORTHO05D008979 7.2e-06 57.0 77 35.1
ClCG09G019220 Citrullus lanatus HOM05D007358 ORTHO05D009117 9.3e-06 56.6 127 29.1
THA.LOC104827130 Tarenaya hassleriana HOM05D007340 ORTHO05D008979 9.3e-06 56.6 81 40.7


User provided reference genes

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