Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052445.1 Olea europaea HOM05D004701 ORTHO05D005220 4.8e-154 547.7 269 100.0
Migut.I00201 Erythranthe guttata HOM05D004701 ORTHO05D005220 6.9e-76 288.1 263 56.3
SalBow5G2872 Salvia bowleyana HOM05D004701 ORTHO05D005220 1.2e-72 277.3 263 55.9
Dinv38737 Davidia involucrata HOM05D004701 ORTHO05D005220 1.3e-71 273.9 262 55.0
Rhsim08G0152800 Rhododendron simsii HOM05D004701 ORTHO05D005220 1.9e-70 270.0 271 50.6
Actinidia04876 Actinidia chinensis HOM05D004701 ORTHO05D005220 5.9e-67 258.5 263 50.6
Cfa018922 Carpinus fangiana HOM05D004701 ORTHO05D005220 3.2e-65 252.7 261 50.2
TAR629G3124 Trochodendron aralioides HOM05D004701 ORTHO05D005220 3.2e-65 252.7 262 49.2
CiPaw.12G011900 Carya illinoinensis HOM05D004701 ORTHO05D005220 7.2e-65 251.5 260 50.0
Solyc03g115840.4 Solanum lycopersicum HOM05D004701 ORTHO05D005220 2.1e-64 250.0 264 50.8
GSVIVG01007980001 Vitis vinifera HOM05D004701 ORTHO05D005220 3.6e-64 249.2 263 49.8
QL10p017494 Quercus lobata HOM05D004701 ORTHO05D005220 1.1e-62 244.2 261 48.7
Nn4g23237 Nelumbo nucifera HOM05D004701 ORTHO05D005220 1.5e-62 243.8 261 48.7
HanXRQChr05g0154901 Helianthus annuus HOM05D004701 ORTHO05D005220 3.3e-62 242.7 254 45.7
Thecc.03G092900 Theobroma cacao HOM05D004701 ORTHO05D005220 2.8e-61 239.6 263 46.8
Gohir.A03G067500 Gossypium hirsutum HOM05D004701 ORTHO05D005220 8.2e-61 238.0 263 46.8
Manes.14G080700 Manihot esculenta HOM05D004701 ORTHO05D005220 1.1e-60 237.7 263 47.5
Lsat_1_v5_gn_5_21460 Lactuca sativa HOM05D004701 ORTHO05D005220 1.8e-60 236.9 252 44.8
Peaxi162Scf00274g00452 Petunia axillaris HOM05D004701 ORTHO05D005220 1.8e-60 236.9 243 54.3
Prupe.5G196200 Prunus persica HOM05D004701 ORTHO05D005220 1.8e-60 236.9 255 47.1
CSS0005828 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 3.1e-60 236.1 250 48.0
ECA246G0122 Erigeron canadensis HOM05D004701 ORTHO05D005220 3.1e-60 236.1 260 44.6
Aqoxy3G03462 Aquilegia oxysepala HOM05D004701 ORTHO05D005220 9.1e-60 234.6 253 49.4
Nitab4.5_0001211g0300 Nicotiana tabacum HOM05D004701 ORTHO05D005220 1.2e-59 234.2 241 53.5
TWI81G0545 Tripterygium wilfordii HOM05D004701 ORTHO05D005220 1.2e-59 234.2 285 43.5
Sed0001989 Sechium edule HOM05D004701 ORTHO05D005220 3.4e-59 232.6 263 46.8
MD06G1196700 Malus domestica HOM05D004701 ORTHO05D005220 4.5e-59 232.3 253 46.6
Lj1g0024661 Lotus japonicus HOM05D004701 ORTHO05D005220 7.7e-59 231.5 262 44.3
Gohir.D03G094000 Gossypium hirsutum HOM05D004701 ORTHO05D005220 1.0e-58 231.1 263 45.6
Duzib205G0738 Durio zibethinus HOM05D004701 ORTHO05D005220 2.9e-58 229.6 263 44.9
Glyma.06G195700 Glycine max HOM05D004701 ORTHO05D005220 3.8e-58 229.2 262 43.1
RcHm_v2.0_Chr7g0181841 Rosa chinensis HOM05D004701 ORTHO05D005220 3.8e-58 229.2 263 45.6
Atru.chr9.198 Acer truncatum HOM05D004701 ORTHO05D005220 5.0e-58 228.8 265 43.8
Sabra17G0093000 Salix brachista HOM05D004701 ORTHO05D005220 5.0e-58 228.8 263 46.0
PSO832G0806 Papaver somniferum HOM05D004701 ORTHO05D005220 8.5e-58 228.0 264 45.8
Potri.017G112200 Populus trichocarpa HOM05D004701 ORTHO05D005220 1.1e-57 227.6 263 45.6
FAN18G0140 Fragaria x ananassa HOM05D004701 ORTHO05D005220 1.4e-57 227.3 263 44.5
PSO063G2323 Papaver somniferum HOM05D004701 ORTHO05D005220 1.9e-57 226.9 264 45.5
CAN.G479.72 Capsicum annuum HOM05D004701 ORTHO05D005220 2.5e-57 226.5 265 49.1
Medtr3g435140 Medicago truncatula HOM05D004701 ORTHO05D005220 3.2e-57 226.1 259 42.5
FvH4_5g14650 Fragaria vesca HOM05D004701 ORTHO05D005220 4.2e-57 225.7 263 44.5
Gorai.003G098100 Gossypium raimondii HOM05D004701 ORTHO05D005220 5.5e-57 225.3 271 44.6
Ciclev10019092m.g Citrus clementina HOM05D004701 ORTHO05D005220 1.2e-56 224.2 276 42.4
ClCG06G016050 Citrullus lanatus HOM05D004701 ORTHO05D005220 2.7e-56 223.0 251 46.6
Thhalv10006967m.g Eutrema salsugineum HOM05D004701 ORTHO05D005220 2.7e-56 223.0 251 45.4
DCAR_010367 Daucus carota HOM05D004701 ORTHO05D005220 3.6e-56 222.6 261 46.0
Sp1g16680 Schrenkiella parvula HOM05D004701 ORTHO05D005220 3.6e-56 222.6 251 45.4
VMungo1309G2345 Vigna mungo HOM05D004701 ORTHO05D005220 3.6e-56 222.6 248 44.0
C08p43140 Brassica napus HOM05D004701 ORTHO05D005220 6.1e-56 221.9 251 45.4
THA.LOC104808258 Tarenaya hassleriana HOM05D004701 ORTHO05D005220 7.9e-56 221.5 261 44.4
BcaB03g14489 Brassica carinata HOM05D004701 ORTHO05D005220 1.8e-55 220.3 261 44.1
A09p59760 Brassica napus HOM05D004701 ORTHO05D005220 1.8e-55 220.3 251 45.4
CsaV3_1G002500 Cucumis sativus L. HOM05D004701 ORTHO05D005220 3.0e-55 219.5 263 44.5
Os07g0632600 Oryza sativa ssp. japonica HOM05D004701 ORTHO05D005220 3.9e-55 219.2 274 43.4
Zm00001eb110080 Zea mays HOM05D004701 ORTHO05D005220 3.9e-55 219.2 274 41.2
BcaC07g41307 Brassica carinata HOM05D004701 ORTHO05D005220 5.2e-55 218.8 251 45.4
CANSAT80G1745 Cannabis sativa HOM05D004701 ORTHO05D005220 8.8e-55 218.0 263 43.0
Duzib068G0813 Durio zibethinus HOM05D004701 ORTHO05D005220 8.8e-55 218.0 262 44.7
Phvul.009G185900 Phaseolus vulgaris HOM05D004701 ORTHO05D005220 8.8e-55 218.0 246 44.3
Sc12g0006470 Simmondsia chinensis HOM05D004701 ORTHO05D005220 8.8e-55 218.0 263 42.2
PGR083G0417 Punica granatum HOM05D004701 ORTHO05D005220 1.1e-54 217.6 261 43.7
AT1G18700 Arabidopsis thaliana HOM05D004701 ORTHO05D005220 2.0e-54 216.9 261 43.7
ATR0564G073 Amborella trichopoda HOM05D004701 ORTHO05D005220 3.3e-54 216.1 261 45.2
Carub.0001s1833 Capsella rubella HOM05D004701 ORTHO05D005220 3.3e-54 216.1 251 45.4
Lalb_Chr08g0235571 Lupinus albus HOM05D004701 ORTHO05D005220 3.3e-54 216.1 259 43.6
arahy.Tifrunner.gnm1.ann1.UQ68S4 Arachis hypogaea HOM05D004701 ORTHO05D005220 1.3e-53 214.2 252 42.9
MELO3C017186.2 Cucumis melo HOM05D004701 ORTHO05D005220 1.7e-53 213.8 263 44.1
AL1G31150 Arabidopsis lyrata HOM05D004701 ORTHO05D005220 2.8e-53 213.0 251 44.6
Cc00_g08370 Coffea canephora HOM05D004701 ORTHO05D005220 2.8e-53 213.0 223 50.2
Eucgr.B00530 Eucalyptus grandis HOM05D004701 ORTHO05D005220 2.8e-53 213.0 255 45.5
TPR.G11816 Trifolium pratense HOM05D004701 ORTHO05D005220 4.8e-53 212.2 263 40.3
arahy.Tifrunner.gnm1.ann1.00I77L Arachis hypogaea HOM05D004701 ORTHO05D005220 4.1e-52 209.1 264 40.5
Haze_07305 Corylus avellana HOM05D004701 ORTHO05D005220 9.1e-52 208.0 362 36.2
vmacro17562 Vaccinium macrocarpon HOM05D004701 ORTHO05D005220 9.1e-52 208.0 298 39.6
Aa31LG7G3460 Aethionema arabicum HOM05D004701 ORTHO05D005220 2.6e-51 206.5 286 38.8
CSS0010493 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 7.7e-51 204.9 236 44.9
Nitab4.5_0005900g0110 Nicotiana tabacum HOM05D004701 ORTHO05D005220 6.5e-50 201.8 259 44.8
Lj4g0017943 Lotus japonicus HOM05D004701 ORTHO05D005220 8.5e-50 201.4 269 40.1
HPP92_019783 Vanilla planifolia HOM05D004701 ORTHO05D005220 8.5e-50 201.4 261 40.6
EL10Ac5g11047 Beta vulgaris HOM05D004701 ORTHO05D005220 1.1e-49 201.1 250 41.6
Hund02633 Selenicereus undatus HOM05D004701 ORTHO05D005220 1.1e-49 201.1 262 41.2
BolC8t51869H Brassica oleracea HOM05D004701 ORTHO05D005220 6.1e-48 195.3 255 42.4
BraA09t41353Z Brassica rapa HOM05D004701 ORTHO05D005220 1.8e-47 193.7 255 42.4
COL.COLO4_36922 Corchorus olitorius HOM05D004701 ORTHO05D005220 2.3e-47 193.4 172 54.1
Lj5A108G55 Lonicera japonica HOM05D004701 ORTHO05D005220 9.7e-46 188.0 232 44.8
FAN08G0610 Fragaria x ananassa HOM05D004701 ORTHO05D005220 4.8e-45 185.7 298 37.6
Psat5g195480 Pisum sativum HOM05D004701 ORTHO05D005220 4.1e-44 182.6 251 37.8
Sopen03g034830 Solanum pennellii HOM05D004701 ORTHO05D005220 1.7e-42 177.2 153 57.5
FAN13G1597 Fragaria x ananassa HOM05D004701 ORTHO05D005220 4.7e-40 169.1 219 42.5
Lj2g0020469 Lotus japonicus HOM05D004701 ORTHO05D005220 5.2e-39 165.6 244 37.7
AUR62021651 Chenopodium quinoa HOM05D004701 ORTHO05D005220 2.2e-37 160.2 236 39.4
Ah.11g048260 Amaranthus hybridus HOM05D004701 ORTHO05D005220 1.6e-32 144.1 262 34.4
MD14G1203400 Malus domestica HOM05D004701 ORTHO05D005220 2.8e-32 143.3 179 41.9
CARHR019320 Cardamine hirsuta HOM05D004701 ORTHO05D005220 1.0e-31 141.4 167 44.3
AUR62008439 Chenopodium quinoa HOM05D004701 ORTHO05D005220 4.0e-31 139.4 269 33.1
SEGI_06018 Sequoiadendron giganteum HOM05D004701 ORTHO05D005220 4.9e-29 132.5 141 45.4
Ca_14652_v3 Cicer arietinum L. HOM05D004701 ORTHO05D005220 1.8e-28 130.6 188 36.2
Mapoly0021s0150 Marchantia polymorpha HOM05D004701 ORTHO05D005220 4.5e-27 125.9 253 31.6
Pp3c17_15290 Physcomitrium patens HOM05D004701 ORTHO05D005220 2.0e-22 110.5 251 28.7
CDE02G4120 Ceratophyllum demersum HOM05D004701 ORTHO05D005220 4.9e-21 105.9 147 37.4
AagrBONN_evm.TU.Sc2ySwM_344.3797 Anthoceros agrestis HOM05D004701 ORTHO05D005220 1.4e-20 104.4 253 26.1
MBI02_g20482_MAGBIO Magnolia biondii HOM05D004701 ORTHO05D005220 9.5e-17 91.7 110 44.5
Cc00_g08360 Coffea canephora HOM05D004701 ORTHO05D005220 1.6e-16 90.9 97 48.5
Cpa.g.c36787.2 Carica papaya HOM05D004701 ORTHO05D005220 2.2e-13 80.5 55 63.6
Sopen03g034820 Solanum pennellii HOM05D004701 ORTHO05D005220 1.1e-12 78.2 75 56.0
TAR629G0729 Trochodendron aralioides HOM05D004701 ORTHO05D005220 1.1e-12 78.2 53 64.2
MBI18_g07590_MAGBIO Magnolia biondii HOM05D003771 ORTHO05D015058 4.1e-12 76.3 52 65.4
HPP92_019730 Vanilla planifolia HOM05D004701 ORTHO05D005220 1.1e-09 68.2 62 53.2
SMO202G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.6e-08 64.3 144 31.9
SMO240G0047 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.4e-07 61.2 105 35.2
SMO117G0311 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 6.8e-07 58.9 111 30.6
SMO274G0023 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 8.9e-07 58.5 95 38.9
MD14G1127800 Malus domestica HOM05D004701 ORTHO05D005220 3.4e-06 56.6 35 68.6


User provided reference genes

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