Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052380.1 Olea europaea HOM05D006050 ORTHO05D007457 2.0e-245 852.0 443 100.0
Migut.M00918 Erythranthe guttata HOM05D006050 ORTHO05D007457 9.3e-187 657.1 432 75.2
CAN.G650.1 Capsicum annuum HOM05D006050 ORTHO05D007457 1.0e-177 627.1 444 72.5
Nitab4.5_0002275g0100 Nicotiana tabacum HOM05D006050 ORTHO05D007457 1.4e-177 626.7 472 69.9
Nitab4.5_0009607g0030 Nicotiana tabacum HOM05D006050 ORTHO05D007457 1.8e-177 626.3 467 70.0
Peaxi162Scf00170g00718 Petunia axillaris HOM05D006050 ORTHO05D007457 2.0e-176 622.9 442 72.6
Solyc02g070560.3 Solanum lycopersicum HOM05D006050 ORTHO05D007457 1.7e-175 619.8 444 72.1
Cc09_g09460 Coffea canephora HOM05D006050 ORTHO05D007457 3.6e-170 602.1 445 69.9
Dinv30732 Davidia involucrata HOM05D006050 ORTHO05D007457 3.1e-166 589.0 409 73.6
Lj2C306G12 Lonicera japonica HOM05D006050 ORTHO05D007457 1.9e-163 579.7 493 64.9
GSVIVG01021436001 Vitis vinifera HOM05D006050 ORTHO05D007457 1.6e-162 576.6 429 69.2
Atru.chr10.1253 Acer truncatum HOM05D006050 ORTHO05D007457 2.7e-162 575.9 442 67.0
Actinidia19520 Actinidia chinensis HOM05D006050 ORTHO05D007457 8.0e-162 574.3 425 70.1
Hma1.2p1_0286F.1_g114100 Hydrangea macrophylla HOM05D006050 ORTHO05D007457 2.3e-161 572.8 418 70.8
SalBow8G2368 Salvia bowleyana HOM05D006050 ORTHO05D007457 3.3e-160 568.9 382 75.7
MD05G1284800 Malus domestica HOM05D006050 ORTHO05D007457 2.8e-159 565.8 434 67.3
PGR083G2192 Punica granatum HOM05D006050 ORTHO05D007457 2.6e-157 559.3 442 66.3
MD10G1263200 Malus domestica HOM05D006050 ORTHO05D007457 4.5e-157 558.5 443 65.9
TAR627G0203 Trochodendron aralioides HOM05D006050 ORTHO05D007457 1.3e-156 557.0 451 67.2
Potri.011G080600 Populus trichocarpa HOM05D006050 ORTHO05D007457 6.5e-156 554.7 445 65.2
Rhsim13G0194500 Rhododendron simsii HOM05D006050 ORTHO05D007457 5.5e-155 551.6 438 67.4
TWI73G0574 Tripterygium wilfordii HOM05D006050 ORTHO05D007457 1.6e-154 550.1 444 66.4
QL05p058532 Quercus lobata HOM05D006050 ORTHO05D007457 4.7e-154 548.5 442 65.8
Thecc.06G151800 Theobroma cacao HOM05D006050 ORTHO05D007457 6.1e-154 548.1 444 64.0
FvH4_3g05720 Fragaria vesca HOM05D006050 ORTHO05D007457 1.0e-153 547.4 435 65.3
RcHm_v2.0_Chr5g0013951 Rosa chinensis HOM05D006050 ORTHO05D007457 3.0e-153 545.8 439 65.6
SGA_v2.0_scaffold1G00164 Striga asiatica HOM05D006050 ORTHO05D007457 2.6e-152 542.7 433 66.1
HanXRQChr02g0047351 Helianthus annuus HOM05D006050 ORTHO05D007457 6.3e-151 538.1 443 65.5
Sabra11G0069700 Salix brachista HOM05D006050 ORTHO05D007457 5.3e-150 535.0 436 64.4
Manes.17G069500 Manihot esculenta HOM05D006050 ORTHO05D007457 1.0e-148 530.8 434 63.6
Aqoxy4G00089 Aquilegia oxysepala HOM05D006050 ORTHO05D007457 2.9e-148 529.3 453 62.5
Eucgr.D00300 Eucalyptus grandis HOM05D006050 ORTHO05D007457 3.2e-147 525.8 444 62.2
Gohir.D05G151500 Gossypium hirsutum HOM05D006050 ORTHO05D007457 4.2e-147 525.4 447 63.1
Gorai.009G155500 Gossypium raimondii HOM05D006050 ORTHO05D007457 4.2e-147 525.4 447 63.3
Gohir.A05G149000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 1.2e-146 523.9 447 63.1
vmacro04186 Vaccinium macrocarpon HOM05D006050 ORTHO05D007457 1.8e-145 520.0 369 72.6
CiPaw.09G124900 Carya illinoinensis HOM05D006050 ORTHO05D007457 6.8e-145 518.1 426 65.3
Sed0022060 Sechium edule HOM05D006050 ORTHO05D007457 1.3e-143 513.8 433 63.0
ECA248G2274 Erigeron canadensis HOM05D006050 ORTHO05D007457 1.1e-142 510.8 416 66.3
ClCG03G007090 Citrullus lanatus HOM05D006050 ORTHO05D007457 3.1e-142 509.2 439 63.6
Sabra11G0067500 Salix brachista HOM05D006050 ORTHO05D007457 3.1e-142 509.2 485 58.4
CsaV3_1G032660 Cucumis sativus L. HOM05D006050 ORTHO05D007457 2.7e-141 506.1 430 62.6
Haze_05583 Corylus avellana HOM05D006050 ORTHO05D007457 5.9e-141 505.0 475 59.8
PSO017G0250 Papaver somniferum HOM05D006050 ORTHO05D007457 2.9e-140 502.7 448 59.6
PSO170G3783 Papaver somniferum HOM05D006050 ORTHO05D007457 2.8e-138 496.1 448 59.4
Nn3g20737 Nelumbo nucifera HOM05D006050 ORTHO05D007457 1.4e-137 493.8 454 61.2
Glyma.15G094900 Glycine max HOM05D006050 ORTHO05D007457 2.3e-137 493.0 444 61.3
Phvul.006G163900 Phaseolus vulgaris HOM05D006050 ORTHO05D007457 4.0e-137 492.3 433 61.0
Lsat_1_v5_gn_1_97741 Lactuca sativa HOM05D006050 ORTHO05D007457 2.0e-136 490.0 387 65.9
VMungo0540G2452 Vigna mungo HOM05D006050 ORTHO05D007457 2.8e-135 486.1 433 60.0
DCAR_003921 Daucus carota HOM05D006050 ORTHO05D007457 1.8e-134 483.4 396 66.4
FAN21G0460 Fragaria x ananassa HOM05D006050 ORTHO05D007457 2.0e-133 479.9 435 59.8
Sc05g0006350 Simmondsia chinensis HOM05D006050 ORTHO05D007457 5.9e-133 478.4 435 58.6
FAN25G0090 Fragaria x ananassa HOM05D006050 ORTHO05D007457 8.6e-132 474.6 435 59.3
Lj6g0009694 Lotus japonicus HOM05D006050 ORTHO05D007457 5.6e-131 471.9 434 57.4
Ca_00551_v3 Cicer arietinum L. HOM05D006050 ORTHO05D007457 1.5e-128 463.8 433 57.7
Gorai.011G043000 Gossypium raimondii HOM05D006050 ORTHO05D007457 1.7e-127 460.3 391 59.1
Duzib192G0778 Durio zibethinus HOM05D006050 ORTHO05D007457 8.3e-127 458.0 444 57.4
EL10Ac8g19724 Beta vulgaris HOM05D006050 ORTHO05D007457 5.4e-126 455.3 442 55.0
Ciclev10017950m.g Citrus clementina HOM05D006050 ORTHO05D007457 4.6e-125 452.2 415 58.8
Duzib235G1544 Durio zibethinus HOM05D006050 ORTHO05D007457 6.0e-125 451.8 444 57.2
Psat1g190800 Pisum sativum HOM05D006050 ORTHO05D007457 2.3e-124 449.9 444 56.1
Ah.09g232650 Amaranthus hybridus HOM05D006050 ORTHO05D007457 1.5e-123 447.2 446 53.6
MELO3C002716.2 Cucumis melo HOM05D006050 ORTHO05D007457 6.2e-122 441.8 369 64.0
Sp7g15790 Schrenkiella parvula HOM05D006050 ORTHO05D007457 8.0e-122 441.4 433 57.3
arahy.Tifrunner.gnm1.ann1.9VA34X Arachis hypogaea HOM05D006050 ORTHO05D007457 1.1e-121 441.0 442 56.1
TPR.G28613 Trifolium pratense HOM05D006050 ORTHO05D007457 1.1e-121 441.0 444 55.2
Medtr2g019630 Medicago truncatula HOM05D006050 ORTHO05D007457 3.1e-121 439.5 433 56.6
arahy.Tifrunner.gnm1.ann1.49YCVY Arachis hypogaea HOM05D006050 ORTHO05D007457 1.2e-120 437.6 452 54.9
THA.LOC104812850 Tarenaya hassleriana HOM05D006050 ORTHO05D007457 2.2e-119 433.3 441 54.4
Thhalv10025036m.g Eutrema salsugineum HOM05D006050 ORTHO05D007457 6.4e-119 431.8 427 56.9
AT4G18270 Arabidopsis thaliana HOM05D006050 ORTHO05D007457 1.4e-118 430.6 431 56.1
AL7G36120 Arabidopsis lyrata HOM05D006050 ORTHO05D007457 4.6e-117 425.6 431 55.5
SGA_v2.0_scaffold333G48995 Striga asiatica HOM05D001706 ORTHO05D007457 7.8e-117 424.9 403 59.8
BraA03t14200Z Brassica rapa HOM05D006050 ORTHO05D007457 4.3e-115 419.1 433 54.5
A03p51180 Brassica napus HOM05D006050 ORTHO05D007457 1.6e-114 417.2 433 54.3
C07p49580 Brassica napus HOM05D006050 ORTHO05D007457 1.1e-113 414.5 433 54.3
AUR62027517 Chenopodium quinoa HOM05D006050 ORTHO05D007457 1.8e-113 413.7 553 44.5
ATR0044G011 Amborella trichopoda HOM05D006050 ORTHO05D007457 3.1e-113 412.9 391 55.0
BolC7t45462H Brassica oleracea HOM05D006050 ORTHO05D007457 2.0e-112 410.2 433 53.6
Cpa.g.sc166.17 Carica papaya HOM05D006050 ORTHO05D007457 3.2e-110 402.9 305 68.5
Aa31LG6G960 Aethionema arabicum HOM05D006050 ORTHO05D007457 9.2e-110 401.4 361 59.3
AagrBONN_evm.TU.Sc2ySwM_228.2617 Anthoceros agrestis HOM05D006050 ORTHO05D007457 9.6e-107 391.3 349 58.5
HPP92_021321 Vanilla planifolia HOM05D006050 ORTHO05D007457 1.5e-104 384.0 418 50.7
HPP92_008747 Vanilla planifolia HOM05D006050 ORTHO05D007457 3.2e-102 376.3 395 51.6
SMO239G0146 Selaginella moellendorffii HOM05D006050 ORTHO05D007457 2.3e-100 370.2 326 60.7
FvH4_3g05710 Fragaria vesca HOM05D006050 ORTHO05D007457 3.4e-96 356.3 317 60.3
Mapoly0001s0010 Marchantia polymorpha HOM05D006050 ORTHO05D007457 1.5e-88 330.9 395 47.8
CBR_g3965 Chara braunii HOM05D006050 ORTHO05D007457 5.8e-80 302.4 356 46.9
MBI10_g02216_MAGBIO Magnolia biondii HOM05D006050 ORTHO05D007457 5.7e-75 285.8 212 70.3
AUR62030211 Chenopodium quinoa HOM05D006050 ORTHO05D007457 1.0e-71 275.0 316 49.4
Carub.0007s2301 Capsella rubella HOM05D006050 ORTHO05D007457 1.5e-67 261.2 194 68.6
Prupe.4G079600 Prunus persica HOM05D006050 ORTHO05D007457 3.3e-67 260.0 246 54.9
Lalb_Chr18g0055531 Lupinus albus HOM05D006050 ORTHO05D007457 9.0e-65 251.9 194 68.6
PGSC0003DMG402021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 4.5e-64 249.6 181 69.1
PGSC0003DMG401021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 5.9e-64 249.2 166 76.5
COL.COLO4_31087 Corchorus olitorius HOM05D006050 ORTHO05D007457 2.2e-63 247.3 262 50.4
Glyma.13G217500 Glycine max HOM05D006050 ORTHO05D007457 1.9e-62 244.2 248 53.6
MBI10_g02215_MAGBIO Magnolia biondii HOM05D006050 ORTHO05D007457 4.3e-59 233.0 253 52.2
Lalb_Chr18g0055521 Lupinus albus HOM05D006050 ORTHO05D007457 6.3e-58 229.2 250 51.2
unitig_32.g11518 Utricularia gibba HOM05D006050 ORTHO05D007457 3.6e-53 213.4 228 52.2
BcaNung05669 Brassica carinata HOM05D006050 ORTHO05D007457 3.9e-52 209.9 166 64.5
PRCOL_00000982 Prasinoderma coloniale HOM05D006050 ORTHO05D007457 4.4e-51 206.5 327 41.9
Gohir.A10G040000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 6.5e-47 192.6 194 49.5
Sopen02g019650 Solanum pennellii HOM05D006050 ORTHO05D007457 3.2e-46 190.3 249 46.6
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 3.2e-46 190.3 213 47.4
Zm00001eb120180 Zea mays HOM05D006050 ORTHO05D007457 5.5e-46 189.5 238 43.3
Gohir.D10G040800 Gossypium hirsutum HOM05D006050 ORTHO05D007457 2.1e-45 187.6 194 49.0
DCAR_029765 Daucus carota HOM05D006050 ORTHO05D007457 8.8e-44 182.2 173 59.0
SEGI_21633 Sequoiadendron giganteum HOM05D006050 ORTHO05D007457 5.7e-43 179.5 152 61.2
Carub.0007s2300 Capsella rubella HOM05D006050 ORTHO05D007457 1.7e-42 177.9 227 47.1
SEGI_20862 Sequoiadendron giganteum HOM05D006050 ORTHO05D007457 1.6e-40 171.4 123 69.1
Cpa.g.sc166.18 Carica papaya HOM05D006050 ORTHO05D007457 5.9e-40 169.5 106 80.2
MCO07G478 Micromonas commoda HOM05D006050 ORTHO05D007457 3.4e-35 153.7 348 35.3
FAN11G0378 Fragaria x ananassa HOM05D006050 ORTHO05D007457 9.8e-35 152.1 139 57.6
CARHR225070 Cardamine hirsuta HOM05D006050 ORTHO05D007457 1.4e-33 148.3 215 43.3
AUR62030212 Chenopodium quinoa HOM05D006050 ORTHO05D007457 3.2e-30 137.1 144 52.1
Pp3c6_19460 Physcomitrium patens HOM05D006050 ORTHO05D007457 2.7e-29 134.0 169 44.4
PSO063G2775 Papaver somniferum HOM05D006050 ORTHO05D007457 8.3e-26 122.5 104 62.5
CSS0017405 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 1.3e-23 115.2 78 75.6
CSS0043541 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 5.6e-22 109.8 66 86.4
Mapoly0042s0029 Marchantia polymorpha HOM05D006050 ORTHO05D007457 2.8e-21 107.5 154 41.6
DCAR_011844 Daucus carota HOM05D006050 ORTHO05D007457 5.7e-19 99.8 89 60.7
CSS0038270 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 1.0e-15 89.0 71 64.8
unitig_32.g11513 Utricularia gibba HOM05D057528 ORTHO05D030710 3.3e-14 84.0 77 55.8
COL.COLO4_31088 Corchorus olitorius HOM05D006050 ORTHO05D007457 2.8e-13 80.9 61 65.6
CSS0030855 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 8.3e-10 69.3 45 66.7
CSS0036908 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 8.3e-10 69.3 45 66.7
vmacro04187 Vaccinium macrocarpon HOM05D006050 ORTHO05D030710 2.0e-08 64.7 74 45.9
Cpa.g.sc166.16 Carica papaya HOM05D006050 ORTHO05D007457 1.1e-06 58.9 74 45.9


User provided reference genes

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