Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052342.1 Olea europaea HOM05D002947 ORTHO05D003447 3.8e-114 414.8 208 100.0
Oeu008115.1 Olea europaea HOM05D002947 ORTHO05D003447 1.7e-21 107.1 77 75.3
TWI77G0483 Tripterygium wilfordii HOM05D002947 ORTHO05D003447 6.0e-19 98.6 77 71.4
Dinv14272 Davidia involucrata HOM05D002947 ORTHO05D003447 7.8e-19 98.2 77 70.1
Lj2A372T36 Lonicera japonica HOM05D002947 ORTHO05D003447 7.8e-19 98.2 81 67.9
Hma1.2p1_0812F.1_g222320 Hydrangea macrophylla HOM05D002947 ORTHO05D003447 1.0e-18 97.8 77 70.1
Atru.chr6.1978 Acer truncatum HOM05D002947 ORTHO05D003447 1.3e-18 97.4 77 68.8
Cpa.g.sc85.91 Carica papaya HOM05D002947 ORTHO05D003447 1.3e-18 97.4 77 70.1
Ciclev10031101m.g Citrus clementina HOM05D002947 ORTHO05D003447 1.3e-18 97.4 77 68.8
TWI74G1631 Tripterygium wilfordii HOM05D002947 ORTHO05D003447 1.3e-18 97.4 77 70.1
Migut.J01818 Erythranthe guttata HOM05D002947 ORTHO05D003447 2.3e-18 96.7 77 70.1
Duzib106G0869 Durio zibethinus HOM05D002947 ORTHO05D003447 3.9e-18 95.9 77 67.5
Duzib128G1407 Durio zibethinus HOM05D002947 ORTHO05D003447 3.9e-18 95.9 77 67.5
Oeu033747.1 Olea europaea HOM05D002947 ORTHO05D003447 3.9e-18 95.9 77 71.4
Thecc.05G168100 Theobroma cacao HOM05D002947 ORTHO05D003447 3.9e-18 95.9 77 67.5
Migut.K00052 Erythranthe guttata HOM05D002947 ORTHO05D003447 5.1e-18 95.5 79 67.1
vmacro07937 Vaccinium macrocarpon HOM05D002947 ORTHO05D003447 5.1e-18 95.5 77 68.8
Gorai.002G156800 Gossypium raimondii HOM05D002947 ORTHO05D003447 1.1e-17 94.4 77 67.5
Peaxi162Scf00258g00123 Petunia axillaris HOM05D002947 ORTHO05D003447 1.1e-17 94.4 77 63.6
Peaxi162Scf00406g01118 Petunia axillaris HOM05D002947 ORTHO05D003447 1.1e-17 94.4 77 66.2
COL.COLO4_36131 Corchorus olitorius HOM05D002947 ORTHO05D003447 1.5e-17 94.0 77 64.9
Gohir.D01G126200 Gossypium hirsutum HOM05D002947 ORTHO05D003447 1.5e-17 94.0 77 66.2
AUR62012070 Chenopodium quinoa HOM05D002947 ORTHO05D003447 1.9e-17 93.6 79 65.8
Lj5g0015442 Lotus japonicus HOM05D002947 ORTHO05D003447 1.9e-17 93.6 77 66.2
Hund24784 Selenicereus undatus HOM05D002947 ORTHO05D003447 1.9e-17 93.6 79 63.3
Cc00_g14580 Coffea canephora HOM05D002947 ORTHO05D003447 2.5e-17 93.2 80 66.2
DCAR_017027 Daucus carota HOM05D002947 ORTHO05D003447 2.5e-17 93.2 77 67.5
arahy.Tifrunner.gnm1.ann1.5W6DG7 Arachis hypogaea HOM05D002947 ORTHO05D003447 3.3e-17 92.8 77 64.9
arahy.Tifrunner.gnm1.ann1.J02EN1 Arachis hypogaea HOM05D002947 ORTHO05D003447 3.3e-17 92.8 77 64.9
Duzib093G0113 Durio zibethinus HOM05D002947 ORTHO05D003447 3.3e-17 92.8 77 63.6
TAR633G0049 Trochodendron aralioides HOM05D002947 ORTHO05D003447 3.3e-17 92.8 77 66.2
AUR62024331 Chenopodium quinoa HOM05D002947 ORTHO05D003447 4.3e-17 92.4 79 64.6
Lju124A31T60 Lonicera japonica HOM05D002947 ORTHO05D003447 4.3e-17 92.4 77 64.9
Manes.09G032000 Manihot esculenta HOM05D002947 ORTHO05D003447 4.3e-17 92.4 77 68.8
SGA_v2.0_scaffold273G46451 Striga asiatica HOM05D002947 ORTHO05D003447 4.3e-17 92.4 79 63.3
Dinv24093 Davidia involucrata HOM05D002947 ORTHO05D003447 5.6e-17 92.0 77 66.2
Medtr7g092810 Medicago truncatula HOM05D002947 ORTHO05D003447 5.6e-17 92.0 77 64.9
MSTRG.6463 Avicennia marina HOM05D002947 ORTHO05D003447 7.3e-17 91.7 75 66.7
MSTRG.6464 Avicennia marina HOM05D002947 ORTHO05D003447 7.3e-17 91.7 75 66.7
Gorai.013G212400 Gossypium raimondii HOM05D002947 ORTHO05D003447 7.3e-17 91.7 77 64.9
GSVIVG01033527001 Vitis vinifera HOM05D002947 ORTHO05D003447 7.3e-17 91.7 77 66.2
Gohir.D04G088800 Gossypium hirsutum HOM05D002947 ORTHO05D003447 9.6e-17 91.3 77 63.6
MD12G1061200 Malus domestica HOM05D002947 ORTHO05D003447 9.6e-17 91.3 77 67.5
PGR142G0298 Punica granatum HOM05D002947 ORTHO05D003447 9.6e-17 91.3 77 67.5
Prupe.7G073500 Prunus persica HOM05D002947 ORTHO05D003447 1.3e-16 90.9 77 67.5
SalBow1G2225 Salvia bowleyana HOM05D002947 ORTHO05D003447 1.3e-16 90.9 79 63.3
SalBow1G2304 Salvia bowleyana HOM05D002947 ORTHO05D003447 1.3e-16 90.9 79 63.3
THA.LOC104824463 Tarenaya hassleriana HOM05D002947 ORTHO05D003447 1.3e-16 90.9 77 64.9
CiPaw.10G028200 Carya illinoinensis HOM05D002947 ORTHO05D003447 1.6e-16 90.5 77 66.2
Nitab4.5_0002841g0010 Nicotiana tabacum HOM05D002947 ORTHO05D003447 1.6e-16 90.5 77 63.6
Nitab4.5_0007123g0030 Nicotiana tabacum HOM05D002947 ORTHO05D003447 1.6e-16 90.5 77 63.6
Ca_08504_v3 Cicer arietinum L. HOM05D002947 ORTHO05D003447 2.1e-16 90.1 77 63.6
Gohir.A01G194500 Gossypium hirsutum HOM05D002947 ORTHO05D003447 2.1e-16 90.1 77 64.9
Gohir.A09G126600 Gossypium hirsutum HOM05D002947 ORTHO05D003447 2.1e-16 90.1 77 62.3
Psat3g069800 Pisum sativum HOM05D002947 ORTHO05D003447 2.1e-16 90.1 77 63.6
CSS0016933 Camellia sinensis var. sinensis HOM05D002947 ORTHO05D003447 2.8e-16 89.7 77 64.9
Lj1g0008821 Lotus japonicus HOM05D002947 ORTHO05D003447 2.8e-16 89.7 77 63.6
MD14G1060900 Malus domestica HOM05D002947 ORTHO05D003447 3.6e-16 89.4 77 66.2
Hund19188 Selenicereus undatus HOM05D002947 ORTHO05D003447 3.6e-16 89.4 79 60.8
Nitab4.5_0000016g0260 Nicotiana tabacum HOM05D002947 ORTHO05D003447 4.8e-16 89.0 77 62.3
Nitab4.5_0003572g0060 Nicotiana tabacum HOM05D002947 ORTHO05D003447 4.8e-16 89.0 77 62.3
Glyma.03G142700 Glycine max HOM05D002947 ORTHO05D003447 6.2e-16 88.6 77 63.6
Glyma.19G145600 Glycine max HOM05D002947 ORTHO05D003447 6.2e-16 88.6 77 63.6
Gohir.D01G184700 Gossypium hirsutum HOM05D002947 ORTHO05D003447 6.2e-16 88.6 77 63.6
Gorai.002G228100 Gossypium raimondii HOM05D002947 ORTHO05D003447 6.2e-16 88.6 77 63.6
Phvul.001G140500 Phaseolus vulgaris HOM05D002947 ORTHO05D003447 6.2e-16 88.6 77 63.6
Sc13g0002110 Simmondsia chinensis HOM05D002947 ORTHO05D003447 6.2e-16 88.6 79 60.8
HanXRQChr01g0009711 Helianthus annuus HOM05D002947 ORTHO05D003447 8.1e-16 88.2 77 63.6
VMungo1383G2267 Vigna mungo HOM05D002947 ORTHO05D003447 8.1e-16 88.2 77 63.6
EL10Ac3g06951 Beta vulgaris HOM05D002947 ORTHO05D003447 1.1e-15 87.8 79 59.5
CANSAT64G0379 Cannabis sativa HOM05D002947 ORTHO05D003447 1.1e-15 87.8 77 62.3
CiPaw.09G032300 Carya illinoinensis HOM05D002947 ORTHO05D003447 1.1e-15 87.8 77 64.9
THA.LOC104819801 Tarenaya hassleriana HOM05D002947 ORTHO05D003447 1.1e-15 87.8 79 60.8
Potri.006G059100 Populus trichocarpa HOM05D002947 ORTHO05D003447 1.4e-15 87.4 78 67.9
Sed0016805 Sechium edule HOM05D002947 ORTHO05D003447 1.4e-15 87.4 77 61.0
Actinidia17262 Actinidia chinensis HOM05D002947 ORTHO05D003447 1.8e-15 87.0 71 67.6
CSS0004843 Camellia sinensis var. sinensis HOM05D002947 ORTHO05D003447 1.8e-15 87.0 77 63.6
CAN.G128.34 Capsicum annuum HOM05D002947 ORTHO05D003447 1.8e-15 87.0 77 61.0
DCAR_013559 Daucus carota HOM05D002947 ORTHO05D003447 1.8e-15 87.0 77 63.6
FAN02G1106 Fragaria x ananassa HOM05D002947 ORTHO05D003447 1.8e-15 87.0 77 64.9
TAR362G1138 Trochodendron aralioides HOM05D002947 ORTHO05D003447 1.8e-15 87.0 77 61.0
ClCG04G002320 Citrullus lanatus HOM05D002947 ORTHO05D003447 3.1e-15 86.3 77 62.3
Gohir.D09G123232 Gossypium hirsutum HOM05D002947 ORTHO05D003447 3.1e-15 86.3 68 67.6
Gorai.006G141400 Gossypium raimondii HOM05D002947 ORTHO05D003447 3.1e-15 86.3 68 67.6
Manes.08G046600 Manihot esculenta HOM05D002947 ORTHO05D003447 3.1e-15 86.3 64 75.0
Potri.016G049000 Populus trichocarpa HOM05D002947 ORTHO05D003447 3.1e-15 86.3 78 66.7
Actinidia09380 Actinidia chinensis HOM05D002947 ORTHO05D003447 4.0e-15 85.9 61 77.0
Ah.13g076050 Amaranthus hybridus HOM05D002947 ORTHO05D003447 4.0e-15 85.9 79 62.0
CsaV3_4G030440 Cucumis sativus L. HOM05D002947 ORTHO05D003447 4.0e-15 85.9 77 62.3
Lsat_1_v5_gn_5_164160 Lactuca sativa HOM05D002947 ORTHO05D003447 4.0e-15 85.9 68 67.6
Sed0024316 Sechium edule HOM05D002947 ORTHO05D003447 4.0e-15 85.9 77 62.3
Solyc10g080440.2 Solanum lycopersicum HOM05D002947 ORTHO05D003447 4.0e-15 85.9 77 61.0
Sopen10g030980 Solanum pennellii HOM05D002947 ORTHO05D003447 4.0e-15 85.9 77 61.0
HanXRQChr13g0389301 Helianthus annuus HOM05D002947 ORTHO05D003447 5.3e-15 85.5 77 63.6
Sabra16G0052800 Salix brachista HOM05D002947 ORTHO05D003447 5.3e-15 85.5 78 66.7
THA.LOC104802444 Tarenaya hassleriana HOM05D002947 ORTHO05D003447 6.9e-15 85.1 77 59.7
FAN05G3407 Fragaria x ananassa HOM05D002947 ORTHO05D003447 9.0e-15 84.7 77 63.6
FAN09G3005 Fragaria x ananassa HOM05D002947 ORTHO05D003447 9.0e-15 84.7 77 63.6
FAN14G0710 Fragaria x ananassa HOM05D002947 ORTHO05D003447 9.0e-15 84.7 77 63.6
FAN14G3985 Fragaria x ananassa HOM05D002947 ORTHO05D003447 9.0e-15 84.7 77 63.6
Glyma.03G142600 Glycine max HOM05D002947 ORTHO05D003447 9.0e-15 84.7 72 65.3
Lsat_1_v5_gn_9_27960 Lactuca sativa HOM05D002947 ORTHO05D003447 9.0e-15 84.7 77 62.3
Lalb_Chr04g0259641 Lupinus albus HOM05D002947 ORTHO05D003447 9.0e-15 84.7 68 67.6
Haze_19959 Corylus avellana HOM05D002947 ORTHO05D003447 1.2e-14 84.3 77 62.3
ECA248G1145 Erigeron canadensis HOM05D002947 ORTHO05D003447 1.2e-14 84.3 68 66.2
Glyma.19G145500 Glycine max HOM05D002947 ORTHO05D003447 1.5e-14 84.0 68 67.6
Sabra06G0042500 Salix brachista HOM05D002947 ORTHO05D003447 1.5e-14 84.0 78 65.4
CARHR168200 Cardamine hirsuta HOM05D002947 ORTHO05D003447 2.0e-14 83.6 79 59.5
Ca_12097_v3 Cicer arietinum L. HOM05D002947 ORTHO05D003447 2.0e-14 83.6 77 62.3
MELO3C008901.2 Cucumis melo HOM05D002947 ORTHO05D003447 2.0e-14 83.6 77 61.0
vmacro09104 Vaccinium macrocarpon HOM05D002947 ORTHO05D003447 2.0e-14 83.6 77 63.6
Carub.0005s2474 Capsella rubella HOM05D002947 ORTHO05D003447 2.6e-14 83.2 79 58.2
Phvul.001G140300 Phaseolus vulgaris HOM05D002947 ORTHO05D003447 3.4e-14 82.8 68 66.2
RcHm_v2.0_Chr3g0480321 Rosa chinensis HOM05D002947 ORTHO05D003447 3.4e-14 82.8 77 62.3
Aa31LG10G12600 Aethionema arabicum HOM05D002947 ORTHO05D003447 4.5e-14 82.4 77 59.7
AL5G39550 Arabidopsis lyrata HOM05D002947 ORTHO05D003447 4.5e-14 82.4 79 58.2
BcaB02g07568 Brassica carinata HOM05D002947 ORTHO05D003447 4.5e-14 82.4 79 57.0
BcaC08g44876 Brassica carinata HOM05D002947 ORTHO05D003447 4.5e-14 82.4 79 57.0
A07p23720 Brassica napus HOM05D002947 ORTHO05D003447 4.5e-14 82.4 79 57.0
BolC6t37647H Brassica oleracea HOM05D002947 ORTHO05D003447 4.5e-14 82.4 79 57.0
BraA07t30024Z Brassica rapa HOM05D002947 ORTHO05D003447 4.5e-14 82.4 79 57.0
VMungo1383G3623 Vigna mungo HOM05D002947 ORTHO05D003447 4.5e-14 82.4 73 63.0
Thhalv10005862m.g Eutrema salsugineum HOM05D002947 ORTHO05D003447 5.8e-14 82.0 79 58.2
PSO384G1923 Papaver somniferum HOM05D002947 ORTHO05D003447 5.8e-14 82.0 77 55.8
TPR.G24903 Trifolium pratense HOM05D002947 ORTHO05D003447 5.8e-14 82.0 77 61.0
Aa31LG1G24040 Aethionema arabicum HOM05D002947 ORTHO05D003447 7.6e-14 81.6 77 57.1
AT3G57890 Arabidopsis thaliana HOM05D002947 ORTHO05D003447 7.6e-14 81.6 79 57.0
BcaC07g40331 Brassica carinata HOM05D002947 ORTHO05D003447 7.6e-14 81.6 79 57.0
C08p33460 Brassica napus HOM05D002947 ORTHO05D003447 7.6e-14 81.6 79 57.0
Nn7g36061 Nelumbo nucifera HOM05D002947 ORTHO05D003447 7.6e-14 81.6 77 59.7
PSO339G6234 Papaver somniferum HOM05D002947 ORTHO05D003447 7.6e-14 81.6 77 54.5
Aqoxy2G00102 Aquilegia oxysepala HOM05D002947 ORTHO05D003447 9.9e-14 81.3 79 63.3
C06p24950 Brassica napus HOM05D002947 ORTHO05D003447 9.9e-14 81.3 79 55.7
BolC8t50944H Brassica oleracea HOM05D002947 ORTHO05D003447 9.9e-14 81.3 79 57.0
BcaC02g09969 Brassica carinata HOM05D002947 ORTHO05D003447 1.3e-13 80.9 79 57.0
A04p02870 Brassica napus HOM05D002947 ORTHO05D003447 1.3e-13 80.9 79 57.0
C04p34480 Brassica napus HOM05D002947 ORTHO05D003447 1.3e-13 80.9 79 57.0
BolC4t25010H Brassica oleracea HOM05D002947 ORTHO05D003447 1.3e-13 80.9 79 57.0
BraA04t16010Z Brassica rapa HOM05D002947 ORTHO05D003447 1.3e-13 80.9 79 57.0
Eucgr.K01823 Eucalyptus grandis HOM05D002947 ORTHO05D003447 1.3e-13 80.9 77 58.4
ECA247G3861 Erigeron canadensis HOM05D002947 ORTHO05D003447 1.7e-13 80.5 77 57.1
Lalb_Chr15g0078891 Lupinus albus HOM05D002947 ORTHO05D003447 2.2e-13 80.1 68 66.2
Sp5g04830 Schrenkiella parvula HOM05D002947 ORTHO05D003447 2.2e-13 80.1 79 55.7
Ah.04g152270 Amaranthus hybridus HOM05D002947 ORTHO05D003447 2.9e-13 79.7 79 60.8
A09p50750 Brassica napus HOM05D002947 ORTHO05D003447 2.9e-13 79.7 79 57.0
Lalb_Chr18g0047721 Lupinus albus HOM05D002947 ORTHO05D003447 8.4e-13 78.2 68 61.8
BcaC07g40162 Brassica carinata HOM05D002947 ORTHO05D003447 1.1e-12 77.8 79 55.7
BcaNung06935 Brassica carinata HOM05D002947 ORTHO05D003447 1.1e-12 77.8 102 46.1
Nn2g15576 Nelumbo nucifera HOM05D002947 ORTHO05D003447 1.4e-12 77.4 72 61.1
SHI16069 Sapria himalayana HOM05D002947 ORTHO05D003447 1.4e-12 77.4 79 58.2
Psat6g118040 Pisum sativum HOM05D002947 ORTHO05D003447 4.2e-12 75.9 77 55.8
CARHR137270 Cardamine hirsuta HOM05D002947 ORTHO05D003447 5.4e-12 75.5 77 53.2
BcaB02g08290 Brassica carinata HOM05D002947 ORTHO05D003447 7.1e-12 75.1 80 55.0
BraA09t40522Z Brassica rapa HOM05D002947 ORTHO05D003447 7.1e-12 75.1 66 62.1
Zm00001eb236410 Zea mays HOM05D002947 ORTHO05D003447 7.1e-12 75.1 85 49.4
AT2G42230 Arabidopsis thaliana HOM05D002947 ORTHO05D003447 9.3e-12 74.7 77 53.2
CDE04G3643 Ceratophyllum demersum HOM05D002947 ORTHO05D003447 9.3e-12 74.7 87 52.9
Medtr1g053360 Medicago truncatula HOM05D002947 ORTHO05D003447 1.2e-11 74.3 77 57.1
Zm00001eb206030 Zea mays HOM05D002947 ORTHO05D003447 1.2e-11 74.3 85 49.4
MBI01_g15752_MAGBIO Magnolia biondii HOM05D002947 ORTHO05D003447 1.6e-11 73.9 72 56.9
AL4G40590 Arabidopsis lyrata HOM05D002947 ORTHO05D003447 2.7e-11 73.2 68 57.4
A05p02790 Brassica napus HOM05D002947 ORTHO05D003447 2.7e-11 73.2 68 57.4
CDE07G1749 Ceratophyllum demersum HOM05D002947 ORTHO05D003447 2.7e-11 73.2 79 51.9
Zm00001eb275750 Zea mays HOM05D002947 ORTHO05D003447 2.7e-11 73.2 64 57.8
BcaC02g12470 Brassica carinata HOM05D002947 ORTHO05D003447 3.5e-11 72.8 68 57.4
C04p03380 Brassica napus HOM05D002947 ORTHO05D003447 3.5e-11 72.8 68 57.4
HanXRQChr10g0295711 Helianthus annuus HOM05D002947 ORTHO05D003447 3.5e-11 72.8 59 66.1
PSO675G6199 Papaver somniferum HOM05D002947 ORTHO05D003447 3.5e-11 72.8 77 57.1
ATR0605G131 Amborella trichopoda HOM05D002947 ORTHO05D003447 4.6e-11 72.4 74 52.7
BraA05t19271Z Brassica rapa HOM05D002947 ORTHO05D003447 4.6e-11 72.4 62 61.3
Thhalv10016442m.g Eutrema salsugineum HOM05D002947 ORTHO05D003447 4.6e-11 72.4 68 55.9
Carub.0004s2457 Capsella rubella HOM05D002947 ORTHO05D003447 7.9e-11 71.6 77 51.9
Os06g0614300 Oryza sativa ssp. japonica HOM05D002947 ORTHO05D003447 7.9e-11 71.6 64 57.8
PSO541G4619 Papaver somniferum HOM05D002947 ORTHO05D003447 7.9e-11 71.6 59 64.4
BolC4t21975H Brassica oleracea HOM05D002947 ORTHO05D003447 1.0e-10 71.2 62 59.7
Sp4g24410 Schrenkiella parvula HOM05D002947 ORTHO05D003447 1.0e-10 71.2 68 55.9
BcaNung04401 Brassica carinata HOM05D002947 ORTHO05D003447 1.3e-10 70.9 62 59.7
Aqoxy1G00183 Aquilegia oxysepala HOM05D002947 ORTHO05D003447 2.3e-10 70.1 77 58.4
HPP92_003002 Vanilla planifolia HOM05D002947 ORTHO05D003447 6.7e-10 68.6 64 53.1
SEGI_11150 Sequoiadendron giganteum HOM05D002947 ORTHO05D003447 1.5e-09 67.4 62 58.1
SEGI_35780 Sequoiadendron giganteum HOM05D002947 ORTHO05D003447 1.5e-09 67.4 62 58.1
HPP92_015466 Vanilla planifolia HOM05D002947 ORTHO05D003447 2.8e-08 63.2 58 58.6
Rhsim03G0009300 Rhododendron simsii HOM05D002947 ORTHO05D003447 6.2e-08 62.0 144 35.4
Pp3c1_33530 Physcomitrium patens HOM05D002947 ORTHO05D003447 1.2e-06 57.8 62 43.5
Pp3c2_1770 Physcomitrium patens HOM05D002947 ORTHO05D003447 1.2e-06 57.8 62 43.5
Mapoly0075s0058 Marchantia polymorpha HOM05D002947 ORTHO05D003447 2.0e-06 57.0 62 41.9
Gohir.A01G137656 Gossypium hirsutum HOM05D002947 ORTHO05D003447 4.5e-06 55.8 88 40.9
Pp3c14_9980 Physcomitrium patens HOM05D002947 ORTHO05D003447 4.5e-06 55.8 62 41.9


User provided reference genes

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