Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052339.1 Olea europaea HOM05D003841 ORTHO05D004602 1.2e-104 383.3 200 100.0
Oeu052335.1 Olea europaea HOM05D003841 ORTHO05D004602 1.1e-81 307.0 188 87.8
Oeu005438.1 Olea europaea HOM05D003841 ORTHO05D004602 2.0e-32 143.3 206 46.1
MSTRG.6876 Avicennia marina HOM05D003841 ORTHO05D004602 1.4e-28 130.6 191 46.1
Dinv02831 Davidia involucrata HOM05D003841 ORTHO05D004602 3.1e-28 129.4 205 43.9
Migut.H01878 Erythranthe guttata HOM05D003841 ORTHO05D004602 8.3e-26 121.3 206 42.7
Actinidia35303 Actinidia chinensis HOM05D003841 ORTHO05D004602 1.4e-25 120.6 207 44.0
Dinv22328 Davidia involucrata HOM05D003841 ORTHO05D004602 1.2e-24 117.5 203 42.9
Lj8A163G39 Lonicera japonica HOM05D003841 ORTHO05D004602 5.0e-23 112.1 196 39.8
QL08p014515 Quercus lobata HOM05D003841 ORTHO05D004602 6.6e-23 111.7 204 36.8
vmacro09595 Vaccinium macrocarpon HOM05D003841 ORTHO05D004602 5.6e-22 108.6 209 39.7
CSS0048456 Camellia sinensis var. sinensis HOM05D003841 ORTHO05D004602 2.1e-21 106.7 208 37.0
Migut.M01831 Erythranthe guttata HOM05D003841 ORTHO05D004602 2.8e-21 106.3 164 47.0
SGA_v2.0_scaffold9G05000 Striga asiatica HOM05D003841 ORTHO05D004602 4.7e-21 105.5 199 39.7
Lj1A861T58 Lonicera japonica HOM05D003841 ORTHO05D004602 1.1e-20 104.4 181 42.5
Nitab4.5_0000552g0100 Nicotiana tabacum HOM05D003841 ORTHO05D004602 1.1e-20 104.4 211 36.0
Peaxi162Scf01365g00027 Petunia axillaris HOM05D003841 ORTHO05D004602 4.0e-20 102.4 171 40.4
SGA_v2.0_scaffold70G23570 Striga asiatica HOM05D003841 ORTHO05D004602 6.8e-20 101.7 191 38.7
Manes.15G079400 Manihot esculenta HOM05D003841 ORTHO05D004602 8.9e-20 101.3 202 38.6
Cc05_g12980 Coffea canephora HOM05D003841 ORTHO05D004602 1.2e-19 100.9 212 38.2
Nitab4.5_0003052g0050 Nicotiana tabacum HOM05D003841 ORTHO05D004602 1.2e-19 100.9 215 35.8
TAR271G0005 Trochodendron aralioides HOM05D003841 ORTHO05D004602 1.5e-19 100.5 208 34.6
CSS0046033 Camellia sinensis var. sinensis HOM05D003841 ORTHO05D004602 3.4e-19 99.4 162 43.2
TAR271G0006 Trochodendron aralioides HOM05D003841 ORTHO05D004602 5.8e-19 98.6 208 35.1
HanXRQChr11g0332121 Helianthus annuus HOM05D003841 ORTHO05D004602 9.9e-19 97.8 170 37.1
Thecc.07G059100 Theobroma cacao HOM05D003841 ORTHO05D004602 9.9e-19 97.8 196 37.2
vmacro11787 Vaccinium macrocarpon HOM05D003841 ORTHO05D004602 9.9e-19 97.8 200 38.5
SalBow7G4379 Salvia bowleyana HOM05D003841 ORTHO05D004602 1.3e-18 97.4 208 36.5
TAR627G0073 Trochodendron aralioides HOM05D003841 ORTHO05D004602 2.9e-18 96.3 181 37.6
CiPaw.12G124700 Carya illinoinensis HOM05D003841 ORTHO05D004602 4.9e-18 95.5 192 35.9
RhsimUnG0254800 Rhododendron simsii HOM05D003841 ORTHO05D004602 4.9e-18 95.5 205 36.6
Rhsim06G0189000 Rhododendron simsii HOM05D003841 ORTHO05D004602 8.3e-18 94.7 201 37.8
Rhsim06G0190700 Rhododendron simsii HOM05D003841 ORTHO05D004602 8.3e-18 94.7 201 37.8
PGSC0003DMG400019273 Solanum tuberosum HOM05D003841 ORTHO05D000515 8.3e-18 94.7 174 37.4
Ciclev10008955m.g Citrus clementina HOM05D003841 ORTHO05D004602 1.9e-17 93.6 173 39.3
Potri.011G130000 Populus trichocarpa HOM05D003841 ORTHO05D004602 2.4e-17 93.2 214 37.4
Oeu052334.1 Olea europaea HOM05D003841 ORTHO05D004602 3.2e-17 92.8 189 35.4
Ah.06g183230 Amaranthus hybridus HOM05D003841 ORTHO05D004602 4.1e-17 92.4 193 36.3
Duzib213G0276 Durio zibethinus HOM05D003841 ORTHO05D004602 4.1e-17 92.4 196 38.3
Lsat_1_v5_gn_7_107821 Lactuca sativa HOM05D003841 ORTHO05D004602 5.4e-17 92.0 180 38.9
DCAR_010006 Daucus carota HOM05D003841 ORTHO05D004602 2.7e-16 89.7 170 38.2
Potri.001G410100 Populus trichocarpa HOM05D003841 ORTHO05D004602 2.7e-16 89.7 207 36.7
Duzib170G0031 Durio zibethinus HOM05D003841 ORTHO05D004602 3.5e-16 89.4 163 39.9
DCAR_008683 Daucus carota HOM05D003841 ORTHO05D004602 4.6e-16 89.0 157 40.8
TWI39G0875 Tripterygium wilfordii HOM05D003841 ORTHO05D004602 4.6e-16 89.0 218 33.5
MSTRG.14400 Avicennia marina HOM05D003841 ORTHO05D004602 3.9e-15 85.9 164 38.4
CANSAT11G1059 Cannabis sativa HOM05D003841 ORTHO05D004602 3.9e-15 85.9 141 37.6
Nn1g06911 Nelumbo nucifera HOM05D003841 ORTHO05D004602 3.9e-15 85.9 163 36.2
FAN21G0547 Fragaria x ananassa HOM05D003841 ORTHO05D004602 1.1e-14 84.3 200 34.5
Lsat_1_v5_gn_2_59361 Lactuca sativa HOM05D003841 ORTHO05D004602 1.5e-14 84.0 141 41.1
Cfa020471 Carpinus fangiana HOM05D003841 ORTHO05D004602 2.5e-14 83.2 202 33.7
MD11G1230100 Malus domestica HOM05D003841 ORTHO05D004602 2.5e-14 83.2 194 31.4
DCAR_022502 Daucus carota HOM05D003841 ORTHO05D004602 3.3e-14 82.8 197 38.1
Haze_09572 Corylus avellana HOM05D003841 ORTHO05D004602 4.3e-14 82.4 201 34.8
TWI38G0390 Tripterygium wilfordii HOM05D003841 ORTHO05D004602 5.6e-14 82.0 218 30.3
COL.COLO4_09535 Corchorus olitorius HOM05D003841 ORTHO05D004602 7.3e-14 81.6 198 36.9
FAN16G3040 Fragaria x ananassa HOM05D003841 ORTHO05D004602 9.5e-14 81.3 200 34.5
Sabra16G0281100 Salix brachista HOM05D003841 ORTHO05D004602 9.5e-14 81.3 214 33.2
FvH4_3g21510 Fragaria vesca HOM05D003841 ORTHO05D004602 1.6e-13 80.5 200 33.0
FAN11G1553 Fragaria x ananassa HOM05D003841 ORTHO05D004602 1.6e-13 80.5 200 33.0
Gohir.A11G281600 Gossypium hirsutum HOM05D003841 ORTHO05D004602 1.6e-13 80.5 199 38.2
ECA236G3199 Erigeron canadensis HOM05D003841 ORTHO05D004602 2.1e-13 80.1 159 37.1
Sopen07g032000 Solanum pennellii HOM05D003841 ORTHO05D004602 2.1e-13 80.1 180 32.2
PSO675G0068 Papaver somniferum HOM05D003841 ORTHO05D004602 2.8e-13 79.7 172 34.3
MELO3C018156.2 Cucumis melo HOM05D003841 ORTHO05D004602 3.6e-13 79.3 201 33.3
Gohir.D11G294200 Gossypium hirsutum HOM05D003841 ORTHO05D004602 3.6e-13 79.3 192 36.5
Gorai.007G317200 Gossypium raimondii HOM05D003841 ORTHO05D004602 3.6e-13 79.3 192 36.5
Solyc07g063870.3 Solanum lycopersicum HOM05D003841 ORTHO05D004602 4.7e-13 79.0 178 33.7
AUR62029272 Chenopodium quinoa HOM05D003841 ORTHO05D004602 6.2e-13 78.6 197 35.5
AUR62041149 Chenopodium quinoa HOM05D003841 ORTHO05D004602 6.2e-13 78.6 194 35.6
Hund23360 Selenicereus undatus HOM05D003841 ORTHO05D004602 8.1e-13 78.2 167 38.3
Eucgr.F03390 Eucalyptus grandis HOM05D003841 ORTHO05D004602 1.1e-12 77.8 206 33.0
arahy.Tifrunner.gnm1.ann1.SIF99T Arachis hypogaea HOM05D003841 ORTHO05D004602 2.4e-12 76.6 211 32.7
FAN25G3758 Fragaria x ananassa HOM05D003841 ORTHO05D004602 3.1e-12 76.3 198 32.3
PSO541G5517 Papaver somniferum HOM05D003841 ORTHO05D004602 3.1e-12 76.3 172 33.1
Lj3g0010893 Lotus japonicus HOM05D003841 ORTHO05D004602 4.0e-12 75.9 170 32.4
Actinidia10692 Actinidia chinensis HOM05D003841 ORTHO05D004602 5.2e-12 75.5 103 43.7
Prupe.4G197300 Prunus persica HOM05D003841 ORTHO05D004602 1.2e-11 74.3 196 30.1
RcHm_v2.0_Chr5g0036951 Rosa chinensis HOM05D003841 ORTHO05D004602 2.6e-11 73.2 149 35.6
THA.LOC104799894 Tarenaya hassleriana HOM05D003841 ORTHO05D004602 2.6e-11 73.2 205 34.6
Sc03g0009430 Simmondsia chinensis HOM05D003841 ORTHO05D004602 3.4e-11 72.8 159 30.8
MD03G1215500 Malus domestica HOM05D003841 ORTHO05D004602 4.4e-11 72.4 194 32.5
Sed0013156 Sechium edule HOM05D003841 ORTHO05D004602 4.4e-11 72.4 174 31.6
MBI18_g38396_MAGBIO Magnolia biondii HOM05D003841 ORTHO05D004602 5.8e-11 72.0 168 36.9
ClCG05G014990 Citrullus lanatus HOM05D003841 ORTHO05D004602 9.9e-11 71.2 199 30.7
EL10Ac4g08014 Beta vulgaris HOM05D003841 ORTHO05D004602 1.3e-10 70.9 193 34.2
Glyma.12G216500 Glycine max HOM05D003841 ORTHO05D004602 1.3e-10 70.9 194 30.9
Oeu052338.1 Olea europaea HOM05D003841 ORTHO05D004602 1.3e-10 70.9 194 32.0
CsaV3_3G022650 Cucumis sativus L. HOM05D003841 ORTHO05D004602 1.7e-10 70.5 202 30.2
Glyma.13G284700 Glycine max HOM05D003841 ORTHO05D004602 2.2e-10 70.1 194 30.4
PSO541G4862 Papaver somniferum HOM05D003841 ORTHO05D004602 2.2e-10 70.1 176 34.7
Gorai.013G165300 Gossypium raimondii HOM05D003841 ORTHO05D004602 3.8e-10 69.3 165 33.9
PSO675G5063 Papaver somniferum HOM05D003841 ORTHO05D004602 3.8e-10 69.3 174 32.2
Gohir.D13G147500 Gossypium hirsutum HOM05D003841 ORTHO05D004602 6.4e-10 68.6 165 33.9
GSVIVG01014549001 Vitis vinifera HOM05D003841 ORTHO05D004602 6.4e-10 68.6 73 47.9
arahy.Tifrunner.gnm1.ann1.GYU1HX Arachis hypogaea HOM05D003841 ORTHO05D004602 8.4e-10 68.2 211 29.4
CDE05G3666 Ceratophyllum demersum HOM05D003841 ORTHO05D004602 1.1e-09 67.8 163 35.6
Lalb_Chr22g0357311 Lupinus albus HOM05D003841 ORTHO05D004602 1.1e-09 67.8 146 33.6
Actinidia05162 Actinidia chinensis HOM05D003841 ORTHO05D004602 1.9e-09 67.0 216 31.9
CARHR267820 Cardamine hirsuta HOM05D003841 ORTHO05D004602 1.9e-09 67.0 195 32.3
Sabra11G0117400 Salix brachista HOM05D003841 ORTHO05D004602 2.4e-09 66.6 144 34.7
TAR623G1765 Trochodendron aralioides HOM05D003841 ORTHO05D004602 3.2e-09 66.2 168 36.3
Sed0016497 Sechium edule HOM05D003841 ORTHO05D004602 4.1e-09 65.9 65 49.2
Gohir.A13G142900 Gossypium hirsutum HOM05D003841 ORTHO05D004602 9.2e-09 64.7 165 33.3
Aa31LG3G10490 Aethionema arabicum HOM05D003841 ORTHO05D004602 1.6e-08 63.9 197 32.0
CAN.G64.40 Capsicum annuum HOM05D003841 ORTHO05D004602 2.1e-08 63.5 63 46.0
Lj3g0010292 Lotus japonicus HOM05D003841 ORTHO05D004602 2.1e-08 63.5 152 32.2
unitig_899.g15555 Utricularia gibba HOM05D003841 ORTHO05D004602 3.5e-08 62.8 164 29.3
ATR0804G047 Amborella trichopoda HOM05D003841 ORTHO05D004602 4.6e-08 62.4 193 27.5
HPP92_004148 Vanilla planifolia HOM05D003841 ORTHO05D004602 4.6e-08 62.4 166 27.7
Os08g0179900 Oryza sativa ssp. japonica HOM05D003841 ORTHO05D004602 1.0e-07 61.2 161 31.1
AT5G54540 Arabidopsis thaliana HOM05D003841 ORTHO05D004602 1.3e-07 60.8 194 29.4
Zm00001eb171810 Zea mays HOM05D003841 ORTHO05D004602 1.3e-07 60.8 162 28.4
AL8G29910 Arabidopsis lyrata HOM05D003841 ORTHO05D004602 3.0e-07 59.7 199 29.6
BcaB08g35813 Brassica carinata HOM05D003841 ORTHO05D004602 3.0e-07 59.7 153 30.1
PSO339G6399 Papaver somniferum HOM05D003841 ORTHO05D004602 3.0e-07 59.7 152 32.9
ClCG10G006140 Citrullus lanatus HOM05D003841 ORTHO05D004602 5.1e-07 58.9 146 29.5
PSO384G0968 Papaver somniferum HOM05D003841 ORTHO05D004602 6.6e-07 58.5 153 33.3
Aqoxy1G03844 Aquilegia oxysepala HOM05D003841 ORTHO05D004602 8.7e-07 58.2 191 28.3
Lalb_Chr01g0006261 Lupinus albus HOM05D003841 ORTHO05D004602 1.9e-06 57.0 171 29.2
Hund02157 Selenicereus undatus HOM05D003841 ORTHO05D004602 5.6e-06 55.5 190 30.0
Zm00001eb413050 Zea mays HOM05D003841 ORTHO05D004602 7.3e-06 55.1 161 26.1


User provided reference genes

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