Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052260.1 Olea europaea HOM05D006775 ORTHO05D008344 3.3e-74 281.6 139 100.0
Oeu062887.1 Olea europaea HOM05D006775 ORTHO05D008344 3.0e-46 188.7 160 65.0
SalBow2G3406 Salvia bowleyana HOM05D006775 ORTHO05D008344 7.8e-39 164.1 159 56.6
SGA_v2.0_scaffold57G20240 Striga asiatica HOM05D006775 ORTHO05D008344 6.8e-35 151.0 159 53.5
Migut.G00207 Erythranthe guttata HOM05D006775 ORTHO05D008344 7.5e-34 147.5 159 49.7
MSTRG.10056 Avicennia marina HOM05D006775 ORTHO05D008344 8.3e-33 144.1 160 51.2
Peaxi162Scf00386g00010 Petunia axillaris HOM05D006775 ORTHO05D008344 1.1e-29 133.7 163 48.5
Nitab4.5_0005595g0020 Nicotiana tabacum HOM05D006775 ORTHO05D008344 9.5e-29 130.6 163 47.9
Nitab4.5_0003256g0010 Nicotiana tabacum HOM05D006775 ORTHO05D008344 3.6e-28 128.6 163 47.2
Hma1.2p1_0823F.1_g224630 Hydrangea macrophylla HOM05D006775 ORTHO05D008344 4.4e-26 121.7 163 46.0
Cc03_g02340 Coffea canephora HOM05D006775 ORTHO05D008344 5.8e-26 121.3 154 48.1
unitig_32.g10786 Utricularia gibba HOM05D006775 ORTHO05D008344 5.8e-26 121.3 157 43.3
vmacro08201 Vaccinium macrocarpon HOM05D006775 ORTHO05D008344 6.4e-25 117.9 154 47.4
DCAR_002444 Daucus carota HOM05D006775 ORTHO05D008344 1.1e-24 117.1 157 45.2
Actinidia40225 Actinidia chinensis HOM05D006775 ORTHO05D008344 1.4e-24 116.7 163 45.4
PGSC0003DMG400022660 Solanum tuberosum HOM05D006775 ORTHO05D008344 5.4e-24 114.8 163 43.6
Cfa015346 Carpinus fangiana HOM05D006775 ORTHO05D008344 9.2e-24 114.0 160 46.9
Lj3A812T71 Lonicera japonica HOM05D006775 ORTHO05D008344 9.2e-24 114.0 158 44.9
Eucgr.H03770 Eucalyptus grandis HOM05D006775 ORTHO05D008344 1.0e-22 110.5 155 45.2
Sopen01g029070 Solanum pennellii HOM05D006775 ORTHO05D008344 1.0e-22 110.5 163 42.9
Solyc01g067280.3 Solanum lycopersicum HOM05D006775 ORTHO05D008344 1.7e-22 109.8 163 42.3
Ciclev10006777m.g Citrus clementina HOM05D000611 ORTHO05D000809 6.6e-22 107.8 143 46.9
PGR004G1240 Punica granatum HOM05D006775 ORTHO05D008344 8.6e-22 107.5 160 41.2
ECA240G4404 Erigeron canadensis HOM05D006775 ORTHO05D008344 1.9e-21 106.3 157 43.9
QL06p007489 Quercus lobata HOM05D006775 ORTHO05D008344 2.5e-21 105.9 152 46.1
GSVIVG01017799001 Vitis vinifera HOM05D000611 ORTHO05D000809 2.5e-21 105.9 160 43.8
Gohir.D10G166800 Gossypium hirsutum HOM05D006775 ORTHO05D008344 3.3e-21 105.5 156 42.9
Gorai.011G186100 Gossypium raimondii HOM05D006775 ORTHO05D008344 3.3e-21 105.5 156 42.9
Lsat_1_v5_gn_5_50761 Lactuca sativa HOM05D006775 ORTHO05D008344 9.6e-21 104.0 159 42.1
HanXRQChr03g0079491 Helianthus annuus HOM05D006775 ORTHO05D008344 1.2e-20 103.6 157 43.3
Haze_01265 Corylus avellana HOM05D006775 ORTHO05D008344 2.1e-20 102.8 147 46.3
Thecc.04G277900 Theobroma cacao HOM05D006775 ORTHO05D008344 2.8e-20 102.4 160 43.1
Gohir.A10G101330 Gossypium hirsutum HOM05D006775 ORTHO05D008344 3.6e-20 102.1 156 41.7
Atru.chr4.2756 Acer truncatum HOM05D006775 ORTHO05D008344 4.7e-20 101.7 160 41.9
COL.COLO4_13925 Corchorus olitorius HOM05D006775 ORTHO05D008344 4.7e-20 101.7 160 41.9
TWI09G0159 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 4.7e-20 101.7 160 41.2
TWI09G0165 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 4.7e-20 101.7 160 41.2
TWI09G0706 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 4.7e-20 101.7 160 41.2
Cpa.g.sc1008.3 Carica papaya HOM05D006775 ORTHO05D008344 8.1e-20 100.9 150 43.3
TAR633G2345 Trochodendron aralioides HOM05D001386 ORTHO05D003791 1.8e-19 99.8 144 43.1
Sc25g0004760 Simmondsia chinensis HOM05D006775 ORTHO05D008344 2.4e-19 99.4 155 41.3
Lj4g0016853 Lotus japonicus HOM05D006775 ORTHO05D008344 6.8e-19 97.8 140 41.4
Nn4g25991 Nelumbo nucifera HOM05D006775 ORTHO05D008344 6.8e-19 97.8 154 39.6
Glyma.07G251400 Glycine max HOM05D006775 ORTHO05D008344 1.5e-18 96.7 142 40.8
MBI18_g12413_MAGBIO Magnolia biondii HOM05D006775 ORTHO05D008344 2.0e-18 96.3 156 39.7
Phvul.003G101000 Phaseolus vulgaris HOM05D006775 ORTHO05D008344 3.4e-18 95.5 147 40.8
Rhsim04G0216500 Rhododendron simsii HOM05D006775 ORTHO05D008344 3.4e-18 95.5 224 33.5
Manes.15G016600 Manihot esculenta HOM05D006775 ORTHO05D008344 4.4e-18 95.1 163 40.5
Duzib151G0911 Durio zibethinus HOM05D006775 ORTHO05D008344 5.8e-18 94.7 134 46.3
Potri.008G204800 Populus trichocarpa HOM05D006775 ORTHO05D008344 9.9e-18 94.0 143 44.1
Nn3g21322 Nelumbo nucifera HOM05D006775 ORTHO05D008344 1.3e-17 93.6 154 41.6
VMungo1215G1959 Vigna mungo HOM05D006775 ORTHO05D008344 2.2e-17 92.8 147 40.8
PSO832G0266 Papaver somniferum HOM05D006775 ORTHO05D008344 3.8e-17 92.0 122 45.9
Lalb_Chr13g0303871 Lupinus albus HOM05D006775 ORTHO05D008344 1.4e-16 90.1 146 41.1
Glyma.17G022900 Glycine max HOM05D006775 ORTHO05D008344 2.4e-16 89.4 145 37.9
MD00G1092600 Malus domestica HOM05D006775 ORTHO05D008344 2.4e-16 89.4 149 39.6
Medtr4g118790 Medicago truncatula HOM05D006775 ORTHO05D008344 2.4e-16 89.4 142 40.1
Sabra08G0157200 Salix brachista HOM05D006775 ORTHO05D008344 4.2e-16 88.6 131 43.5
arahy.Tifrunner.gnm1.ann1.HV9WHL Arachis hypogaea HOM05D006775 ORTHO05D008344 9.3e-16 87.4 152 41.4
arahy.Tifrunner.gnm1.ann1.UNR197 Arachis hypogaea HOM05D006775 ORTHO05D008344 9.3e-16 87.4 152 41.4
Prupe.1G365500 Prunus persica HOM05D006775 ORTHO05D008344 1.6e-15 86.7 158 38.0
Psat4g030400 Pisum sativum HOM05D006775 ORTHO05D008344 2.7e-15 85.9 142 40.1
TPR.G14956 Trifolium pratense HOM05D006775 ORTHO05D008344 4.6e-15 85.1 142 39.4
Aqoxy5G01958 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 1.0e-14 84.0 155 35.5
AUR62042989 Chenopodium quinoa HOM05D006775 ORTHO05D008344 2.3e-14 82.8 133 39.1
CSS0032456 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 3.9e-14 82.0 69 62.3
CiPaw.02G086400 Carya illinoinensis HOM05D006775 ORTHO05D008344 5.1e-14 81.6 141 41.8
MELO3C006607.2 Cucumis melo HOM05D006775 ORTHO05D008344 8.7e-14 80.9 135 37.8
CsaV3_3G014150 Cucumis sativus L. HOM05D006775 ORTHO05D008344 1.1e-13 80.5 135 37.0
HPP92_025211 Vanilla planifolia HOM05D006775 ORTHO05D008344 1.5e-13 80.1 148 35.1
HPP92_025275 Vanilla planifolia HOM05D006775 ORTHO05D008344 1.5e-13 80.1 148 35.1
HPP92_025229 Vanilla planifolia HOM05D006775 ORTHO05D008344 2.5e-13 79.3 148 35.1
Sed0012602 Sechium edule HOM05D006775 ORTHO05D008344 3.3e-13 79.0 135 36.3
AL7G39920 Arabidopsis lyrata HOM05D006775 ORTHO05D008344 4.3e-13 78.6 143 39.9
Psat4g030480 Pisum sativum HOM05D006775 ORTHO05D008344 4.3e-13 78.6 139 36.7
Gohir.D09G234500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 5.6e-13 78.2 142 38.0
RcHm_v2.0_Chr6g0302841 Rosa chinensis HOM05D006775 ORTHO05D008344 5.6e-13 78.2 156 37.2
AT4G15563 Arabidopsis thaliana HOM05D006775 ORTHO05D008344 1.6e-12 76.6 147 36.1
Gorai.006G257400 Gossypium raimondii HOM05D006775 ORTHO05D008344 1.6e-12 76.6 142 37.3
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 2.1e-12 76.3 156 34.6
Carub.0007s2625 Capsella rubella HOM05D006775 ORTHO05D008344 2.1e-12 76.3 147 37.4
EL10Ac3g06567 Beta vulgaris HOM05D006775 ORTHO05D008344 2.8e-12 75.9 150 38.0
CARHR289990 Cardamine hirsuta HOM05D006775 ORTHO05D008344 2.8e-12 75.9 157 35.7
Sp7g13860 Schrenkiella parvula HOM05D006775 ORTHO05D008344 4.8e-12 75.1 146 35.6
Gohir.A09G233400 Gossypium hirsutum HOM05D006775 ORTHO05D008344 6.2e-12 74.7 146 36.3
ClCG05G005800 Citrullus lanatus HOM05D006775 ORTHO05D008344 1.1e-11 73.9 135 34.8
BcaC09g50254 Brassica carinata HOM05D001154 ORTHO05D001175 1.4e-11 73.6 146 35.6
C01p27330 Brassica napus HOM05D006775 ORTHO05D008344 1.4e-11 73.6 146 35.6
BolC1t02676H Brassica oleracea HOM05D006775 ORTHO05D008344 1.4e-11 73.6 146 35.6
CANSAT78G0382 Cannabis sativa HOM05D006775 ORTHO05D008344 1.8e-11 73.2 66 54.5
THA.LOC104820238 Tarenaya hassleriana HOM05D006775 ORTHO05D008344 1.8e-11 73.2 157 33.8
Thhalv10026419m.g Eutrema salsugineum HOM05D006775 ORTHO05D008344 2.4e-11 72.8 140 37.1
ATR0706G197 Amborella trichopoda HOM05D006775 ORTHO05D008344 3.1e-11 72.4 146 33.6
Ca_21549_v3 Cicer arietinum L. HOM05D006775 ORTHO05D008344 3.1e-11 72.4 133 37.6
Aa31LG9G1860 Aethionema arabicum HOM05D006775 ORTHO05D008344 4.0e-11 72.0 144 38.2
A01p21970 Brassica napus HOM05D006775 ORTHO05D008344 4.0e-11 72.0 146 34.9
BraA01t02103Z Brassica rapa HOM05D006775 ORTHO05D008344 4.0e-11 72.0 146 34.9
BcaNung00261 Brassica carinata HOM05D006775 ORTHO05D008344 5.3e-11 71.6 147 34.7
CDE08G1672 Ceratophyllum demersum HOM05D006775 ORTHO05D008344 1.7e-09 66.6 136 34.6
Zm00001eb285420 Zea mays HOM05D006775 ORTHO05D008344 8.4e-09 64.3 148 30.4
Duzib052G0853 Durio zibethinus HOM05D006775 ORTHO05D008344 3.2e-08 62.4 127 36.2
Os05g0372800 Oryza sativa ssp. japonica HOM05D006775 ORTHO05D008344 7.1e-08 61.2 137 32.1
Dinv38323 Davidia involucrata HOM05D006775 ORTHO05D008344 6.0e-07 58.2 71 47.9
Aqoxy5G00644 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 1.0e-06 57.4 85 40.0
Gohir.D10G153500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 2.3e-06 56.2 134 34.3
SMO340G0127 Selaginella moellendorffii HOM05D006775 ORTHO05D008344 2.3e-06 56.2 143 30.1


User provided reference genes

Program Settings