Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052200.1 Olea europaea HOM05D005756 ORTHO05D007991 8.2e-285 983.0 491 100.0
Oeu027646.1 Olea europaea HOM05D005756 ORTHO05D007991 1.2e-187 660.2 377 82.8
Oeu021293.1 Olea europaea HOM05D005756 ORTHO05D007991 7.0e-175 617.8 468 65.4
SalBow1G0676 Salvia bowleyana HOM05D005756 ORTHO05D007991 1.0e-165 587.4 464 63.6
Peaxi162Scf00802g00236 Petunia axillaris HOM05D005756 ORTHO05D007991 4.4e-161 572.0 472 58.7
Peaxi162Scf00218g00178 Petunia axillaris HOM05D005756 ORTHO05D007991 4.8e-160 568.5 496 58.7
SalBow1G7885 Salvia bowleyana HOM05D005756 ORTHO05D007991 7.7e-158 561.2 459 61.7
Nitab4.5_0000006g0690 Nicotiana tabacum HOM05D005756 ORTHO05D007991 9.4e-156 554.3 462 60.2
Rhsim04G0027400 Rhododendron simsii HOM05D005756 ORTHO05D007991 1.4e-154 550.4 477 59.1
CAN.G60.7 Capsicum annuum HOM05D005756 ORTHO05D007991 3.0e-154 549.3 491 57.6
Nitab4.5_0010487g0010 Nicotiana tabacum HOM05D005756 ORTHO05D007991 5.2e-154 548.5 462 59.7
CSS0006225 Camellia sinensis var. sinensis HOM05D005756 ORTHO05D007991 2.8e-152 542.7 475 60.0
Solyc05g041220.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 4.8e-152 542.0 480 58.5
Migut.K00325 Erythranthe guttata HOM05D005756 ORTHO05D007991 2.4e-151 539.7 477 57.9
Cc00_g15460 Coffea canephora HOM05D005756 ORTHO05D007991 1.0e-146 524.2 380 65.5
Nn1g03213 Nelumbo nucifera HOM05D005756 ORTHO05D007991 2.6e-145 519.6 470 57.0
Migut.J01345 Erythranthe guttata HOM05D005756 ORTHO05D007991 1.7e-144 516.9 482 57.3
Actinidia35206 Actinidia chinensis HOM05D005756 ORTHO05D007991 2.8e-144 516.2 471 56.1
unitig_0.g2684 Utricularia gibba HOM05D005756 ORTHO05D007991 1.8e-143 513.5 501 53.3
Nitab4.5_0005267g0030 Nicotiana tabacum HOM05D005756 ORTHO05D007991 9.2e-143 511.1 378 63.5
MD09G1126000 Malus domestica HOM05D005756 ORTHO05D007991 1.6e-142 510.4 467 56.5
FvH4_6g40720 Fragaria vesca HOM05D005756 ORTHO05D007991 5.9e-142 508.4 467 53.3
FAN05G2330 Fragaria x ananassa HOM05D005756 ORTHO05D007991 1.7e-141 506.9 467 54.0
FAN09G1647 Fragaria x ananassa HOM05D005756 ORTHO05D007991 2.9e-141 506.1 489 52.1
DCAR_019686 Daucus carota HOM05D005756 ORTHO05D001984 5.0e-141 505.4 369 64.2
FAN14G2144 Fragaria x ananassa HOM05D005756 ORTHO05D007991 5.0e-141 505.4 467 53.1
vmacro09483 Vaccinium macrocarpon HOM05D005756 ORTHO05D007991 6.6e-141 505.0 380 63.7
Manes.12G064800 Manihot esculenta HOM05D005756 ORTHO05D007991 8.6e-141 504.6 477 56.2
Hma1.2p1_0545F.1_g176030 Hydrangea macrophylla HOM05D005756 ORTHO05D007991 1.9e-140 503.4 381 64.3
Actinidia18810 Actinidia chinensis HOM05D005756 ORTHO05D007991 7.3e-140 501.5 472 54.9
GSVIVG01030075001 Vitis vinifera HOM05D005756 ORTHO05D007991 1.2e-137 494.2 476 55.0
Manes.13G062400 Manihot esculenta HOM05D005756 ORTHO05D007991 1.5e-137 493.8 480 54.2
RcHm_v2.0_Chr2g0156171 Rosa chinensis HOM05D005756 ORTHO05D007991 5.8e-137 491.9 486 51.9
TAR629G3088 Trochodendron aralioides HOM05D005756 ORTHO05D007991 2.2e-136 490.0 473 53.5
Sabra14G0126700 Salix brachista HOM05D005756 ORTHO05D007991 3.2e-135 486.1 474 55.3
ClCG02G009290 Citrullus lanatus HOM05D005756 ORTHO05D007991 5.4e-135 485.3 472 53.6
Ciclev10018016m.g Citrus clementina HOM05D005756 ORTHO05D007991 9.2e-135 484.6 475 54.1
MELO3C025971.2 Cucumis melo HOM05D005756 ORTHO05D007991 9.2e-135 484.6 472 52.8
Gohir.A07G164300 Gossypium hirsutum HOM05D005756 ORTHO05D007991 1.2e-134 484.2 469 53.3
AT5G35770 Arabidopsis thaliana HOM05D005756 ORTHO05D007991 2.7e-134 483.0 494 51.6
Potri.014G166400 Populus trichocarpa HOM05D005756 ORTHO05D007991 3.5e-134 482.6 476 53.8
Gorai.001G191800 Gossypium raimondii HOM05D005756 ORTHO05D007991 1.0e-133 481.1 469 53.3
AL7G44670 Arabidopsis lyrata HOM05D005756 ORTHO05D007991 1.7e-133 480.3 471 52.7
Sed0018608 Sechium edule HOM05D005756 ORTHO05D007991 2.3e-133 479.9 471 53.7
Solyc07g045550.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 2.3e-133 479.9 377 61.3
CsaV3_6G009540 Cucumis sativus L. HOM05D005756 ORTHO05D007991 6.6e-133 478.4 493 51.1
Gohir.D07G171500 Gossypium hirsutum HOM05D005756 ORTHO05D007991 8.6e-133 478.0 469 53.1
Lsat_1_v5_gn_7_97180 Lactuca sativa HOM05D005756 ORTHO05D007991 1.1e-132 477.6 481 51.6
PGSC0003DMG400018834 Solanum tuberosum HOM05D005756 ORTHO05D007991 5.6e-132 475.3 377 61.8
Haze_12636 Corylus avellana HOM05D005756 ORTHO05D007991 1.2e-131 474.2 473 53.1
Prupe.3G198700 Prunus persica HOM05D005756 ORTHO05D007991 1.2e-131 474.2 475 53.1
Thecc.01G193500 Theobroma cacao HOM05D005756 ORTHO05D007991 2.1e-131 473.4 472 53.2
Duzib211G0508 Durio zibethinus HOM05D005756 ORTHO05D007991 3.1e-130 469.5 469 52.5
Dinv26618 Davidia involucrata HOM05D005756 ORTHO05D007991 4.0e-130 469.2 471 53.5
SHI10154 Sapria himalayana HOM05D005756 ORTHO05D007991 5.2e-130 468.8 493 50.7
Gohir.A07G191400 Gossypium hirsutum HOM05D005756 ORTHO05D007991 6.8e-130 468.4 462 52.6
Carub.0007s3155 Capsella rubella HOM05D005756 ORTHO05D007991 1.5e-129 467.2 471 51.6
Sp7g06350 Schrenkiella parvula HOM05D005756 ORTHO05D007991 2.6e-129 466.5 473 52.2
Aa31sc373G50 Aethionema arabicum HOM05D005756 ORTHO05D007991 4.4e-129 465.7 495 50.1
Oeu032118.1 Olea europaea HOM05D005756 ORTHO05D007991 5.8e-129 465.3 468 54.7
MD17G1116000 Malus domestica HOM05D005756 ORTHO05D007991 9.8e-129 464.5 374 61.0
HanXRQChr11g0328881 Helianthus annuus HOM05D005756 ORTHO05D007991 1.7e-128 463.8 480 50.2
Gorai.001G221400 Gossypium raimondii HOM05D005756 ORTHO05D007991 2.2e-128 463.4 488 50.2
THA.LOC104815437 Tarenaya hassleriana HOM05D005756 ORTHO05D007991 6.4e-128 461.8 475 52.2
Duzib133G1068 Durio zibethinus HOM05D005756 ORTHO05D007991 8.3e-128 461.5 469 52.0
C04p43490 Brassica napus HOM05D005756 ORTHO05D007991 1.1e-127 461.1 497 50.3
BolC4t25929H Brassica oleracea HOM05D005756 ORTHO05D007991 2.4e-127 459.9 497 50.3
BcaB06g26996 Brassica carinata HOM05D005756 ORTHO05D007991 3.2e-127 459.5 497 50.5
BcaC02g09499 Brassica carinata HOM05D005756 ORTHO05D007991 4.1e-127 459.1 497 50.1
A04p10010 Brassica napus HOM05D005756 ORTHO05D007991 7.1e-127 458.4 495 50.1
BraA04t16663Z Brassica rapa HOM05D005756 ORTHO05D007991 7.1e-127 458.4 495 50.1
Sc21g0000630 Simmondsia chinensis HOM05D005756 ORTHO05D007991 1.6e-126 457.2 456 51.3
PSO675G1451 Papaver somniferum HOM05D005756 ORTHO05D007991 4.6e-126 455.7 481 51.8
Lj1C795T0 Lonicera japonica HOM05D005756 ORTHO05D007991 2.3e-125 453.4 378 58.7
COL.COLO4_33341 Corchorus olitorius HOM05D005756 ORTHO05D007991 3.9e-125 452.6 469 51.0
Sed0020254 Sechium edule HOM05D005756 ORTHO05D007991 6.6e-125 451.8 459 52.3
ECA236G0821 Erigeron canadensis HOM05D005756 ORTHO05D007991 8.6e-125 451.4 470 49.6
CANSAT64G2821 Cannabis sativa HOM05D005756 ORTHO05D007991 1.5e-124 450.7 470 50.2
PSO541G4672 Papaver somniferum HOM05D005756 ORTHO05D007991 7.3e-124 448.4 481 51.1
HanXRQChr04g0126551 Helianthus annuus HOM05D005756 ORTHO05D007991 1.6e-123 447.2 376 55.6
CiPaw.03G281000 Carya illinoinensis HOM05D005756 ORTHO05D007991 2.3e-122 443.4 472 50.2
PGR042G1143 Punica granatum HOM05D005756 ORTHO05D007991 5.2e-122 442.2 460 51.1
QL08p028191 Quercus lobata HOM05D005756 ORTHO05D007991 2.0e-121 440.3 493 49.3
CDE06G1141 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 2.4e-119 433.3 468 47.0
Gohir.D07G197700 Gossypium hirsutum HOM05D005756 ORTHO05D007991 7.1e-119 431.8 377 56.5
Thhalv10005699m.g Eutrema salsugineum HOM05D005756 ORTHO05D007991 9.2e-119 431.4 380 56.1
SGA_v2.0_scaffold12G05997 Striga asiatica HOM05D005756 ORTHO05D007991 3.5e-118 429.5 383 56.1
Sopen05g025200 Solanum pennellii HOM05D005756 ORTHO05D000001 5.1e-117 425.6 470 50.9
AUR62015018 Chenopodium quinoa HOM05D005756 ORTHO05D007991 2.0e-113 413.7 488 45.7
Aqoxy4G02252 Aquilegia oxysepala HOM05D005756 ORTHO05D007991 9.9e-113 411.4 478 47.5
SGA_v2.0_scaffold265G46105 Striga asiatica HOM05D005756 ORTHO05D007991 3.5e-110 402.9 467 49.0
Ah.01g013810 Amaranthus hybridus HOM05D005756 ORTHO05D007991 1.3e-109 401.0 476 45.6
CARHR216780 Cardamine hirsuta HOM05D005756 ORTHO05D007991 8.7e-109 398.3 350 56.6
Eucgr.A01028 Eucalyptus grandis HOM05D005756 ORTHO05D007991 2.1e-107 393.7 378 51.9
EL10Ac9g22689 Beta vulgaris HOM05D005756 ORTHO05D007991 1.2e-105 387.9 400 50.8
unitig_748.g7200 Utricularia gibba HOM05D005756 ORTHO05D007991 9.9e-105 384.8 474 46.6
Cpa.g.sc211.22 Carica papaya HOM05D005756 ORTHO05D007991 4.5e-97 359.4 311 56.3
TPR.G1270 Trifolium pratense HOM05D005756 ORTHO05D007991 2.1e-94 350.5 486 41.6
Lalb_Chr10g0107581 Lupinus albus HOM05D005756 ORTHO05D007991 6.0e-94 349.0 470 40.6
Medtr5g097060 Medicago truncatula HOM05D005756 ORTHO05D007991 3.0e-93 346.7 482 42.1
LjContig00081g0010185 Lotus japonicus HOM05D005756 ORTHO05D007991 6.2e-91 339.0 474 41.4
Glyma.02G304600 Glycine max HOM05D005756 ORTHO05D007991 1.8e-90 337.4 476 41.4
Psat2g005040 Pisum sativum HOM05D005756 ORTHO05D007991 4.0e-90 336.3 487 40.5
ATR0624G001 Amborella trichopoda HOM05D005756 ORTHO05D007991 3.4e-89 333.2 462 41.3
SEGI_03134 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 2.9e-88 330.1 490 38.2
arahy.Tifrunner.gnm1.ann1.P22I4F Arachis hypogaea HOM05D005756 ORTHO05D007991 8.4e-88 328.6 477 40.7
arahy.Tifrunner.gnm1.ann1.5EZV1I Arachis hypogaea HOM05D005756 ORTHO05D007991 1.1e-87 328.2 477 40.9
VMungo0647G0888 Vigna mungo HOM05D005756 ORTHO05D007991 5.5e-87 325.9 473 40.4
HPP92_014030 Vanilla planifolia HOM05D005756 ORTHO05D007991 2.7e-86 323.6 475 42.3
HPP92_028362 Vanilla planifolia HOM05D005756 ORTHO05D007991 3.5e-86 323.2 475 42.5
Phvul.008G284100 Phaseolus vulgaris HOM05D005756 ORTHO05D007991 4.6e-86 322.8 475 40.6
SEGI_35519 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 6.0e-86 322.4 498 38.4
TWI18G0016 Tripterygium wilfordii HOM05D005756 ORTHO05D007991 1.0e-85 321.6 452 39.6
SEGI_14875 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 1.5e-84 317.8 506 37.2
Atru.chr6.3377 Acer truncatum HOM05D005756 ORTHO05D007991 2.8e-83 313.5 386 47.4
CANSAT64G2382 Cannabis sativa HOM05D005756 ORTHO05D007991 1.8e-82 310.8 333 47.7
Ca_06445_v3 Cicer arietinum L. HOM05D005756 ORTHO05D007991 2.6e-81 307.0 396 42.2
CDE04G3001 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 1.2e-78 298.1 470 37.7
Gohir.D11G156320 Gossypium hirsutum HOM05D005756 ORTHO05D007991 2.0e-73 280.8 487 39.2
AUR62029095 Chenopodium quinoa HOM05D005756 ORTHO05D007991 2.5e-71 273.9 266 50.8
Glyma.14G009200 Glycine max HOM05D005756 ORTHO05D007991 3.0e-69 266.9 346 42.8
SEGI_34368 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 6.7e-69 265.8 389 38.0
Dinv21286 Davidia involucrata HOM05D005756 ORTHO05D007991 5.0e-56 223.0 284 43.3
SMO364G0494 Selaginella moellendorffii HOM05D005756 ORTHO05D007991 6.5e-48 196.1 460 28.5
SGA_v2.0_scaffold12G05995 Striga asiatica HOM05D002374 ORTHO05D406151 3.5e-33 147.1 156 48.7
MBI19_g37437_MAGBIO Magnolia biondii HOM05D005756 ORTHO05D007991 3.3e-31 140.6 131 51.9
Oeu027645.1 Olea europaea HOM05D005756 ORTHO05D018916 5.0e-16 90.1 80 78.8
Hma1.2p1_0545F.1_g176010 Hydrangea macrophylla HOM05D005756 ORTHO05D018916 1.4e-13 82.0 54 79.6
Lj1C795T1 Lonicera japonica HOM05D005756 ORTHO05D018916 1.2e-12 79.0 80 60.0
DCAR_019685 Daucus carota HOM05D005756 ORTHO05D018916 2.0e-12 78.2 75 60.0
Cpa.g.sc211.21 Carica papaya HOM05D005756 ORTHO05D018916 2.9e-11 74.3 55 70.9
Dinv21288 Davidia involucrata HOM05D005756 ORTHO05D018916 1.4e-10 72.0 53 69.8
SEGI_18115 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 7.1e-10 69.7 140 33.6
Solyc07g045560.1 Solanum lycopersicum HOM05D005756 ORTHO05D018916 6.2e-06 56.6 39 66.7


User provided reference genes

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