Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052197.1 Olea europaea HOM05D005809 ORTHO05D007259 1.8e-122 442.6 226 100.0
MSTRG.19648 Avicennia marina HOM05D005809 ORTHO05D007259 2.7e-81 305.8 227 69.6
Dinv41380 Davidia involucrata HOM05D005809 ORTHO05D007259 1.9e-79 299.7 232 68.1
Migut.J01341 Erythranthe guttata HOM05D005809 ORTHO05D007259 3.3e-79 298.9 226 67.3
GSVIVG01023603001 Vitis vinifera HOM05D005809 ORTHO05D007259 2.4e-77 292.7 233 65.2
Dinv43244 Davidia involucrata HOM05D005809 ORTHO05D007259 4.0e-77 292.0 232 66.4
Hma1.2p1_0222F.1_g093550 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 4.0e-77 292.0 230 65.7
Prupe.7G262800 Prunus persica HOM05D005809 ORTHO05D007259 4.0e-77 292.0 226 64.2
Eucgr.C02542 Eucalyptus grandis HOM05D005809 ORTHO05D007259 4.4e-76 288.5 233 65.7
CiPaw.15G168900 Carya illinoinensis HOM05D005809 ORTHO05D007259 5.8e-76 288.1 233 66.5
QL02p093215 Quercus lobata HOM05D005809 ORTHO05D007259 1.3e-75 287.0 232 65.5
Solyc07g005640.3 Solanum lycopersicum HOM05D005809 ORTHO05D007259 1.3e-75 287.0 226 65.0
Eucgr.C02492 Eucalyptus grandis HOM05D005809 ORTHO05D007259 1.7e-75 286.6 233 65.2
Gohir.D05G056000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 1.7e-75 286.6 229 64.6
Sopen07g001740 Solanum pennellii HOM05D005809 ORTHO05D007259 2.9e-75 285.8 226 64.2
Gorai.009G057000 Gossypium raimondii HOM05D005809 ORTHO05D007259 3.8e-75 285.4 229 64.2
Ciclev10009378m.g Citrus clementina HOM05D005809 ORTHO05D007259 8.4e-75 284.3 233 63.5
Duzib187G1947 Durio zibethinus HOM05D005809 ORTHO05D007259 8.4e-75 284.3 229 64.6
Thecc.09G030800 Theobroma cacao HOM05D005809 ORTHO05D007259 1.1e-74 283.9 229 65.1
CSS0045900 Camellia sinensis var. sinensis HOM05D005809 ORTHO05D007259 1.9e-74 283.1 232 64.7
MD02G1007700 Malus domestica HOM05D005809 ORTHO05D007259 1.9e-74 283.1 226 62.8
COL.COLO4_18808 Corchorus olitorius HOM05D005809 ORTHO05D007259 3.5e-73 278.9 229 62.4
Lalb_Chr23g0275681 Lupinus albus HOM05D005809 ORTHO05D007259 3.5e-73 278.9 233 62.7
RcHm_v2.0_Chr2g0085671 Rosa chinensis HOM05D005809 ORTHO05D007259 3.5e-73 278.9 226 64.6
SalBow1G5910 Salvia bowleyana HOM05D005809 ORTHO05D007259 6.0e-73 278.1 220 67.3
PGSC0003DMG401011139 Solanum tuberosum HOM05D005809 ORTHO05D007259 7.9e-73 277.7 230 63.9
CANSAT11G2656 Cannabis sativa HOM05D005809 ORTHO05D007259 1.0e-72 277.3 229 62.9
Ca_03733_v3 Cicer arietinum L. HOM05D005809 ORTHO05D007259 2.3e-72 276.2 235 61.7
FAN23G2666 Fragaria x ananassa HOM05D005809 ORTHO05D007259 5.1e-72 275.0 226 63.3
TAR636G3217 Trochodendron aralioides HOM05D005809 ORTHO05D007259 8.7e-72 274.2 237 62.4
TPR.G20735 Trifolium pratense HOM05D005809 ORTHO05D007259 1.9e-71 273.1 232 60.8
ECA247G0266 Erigeron canadensis HOM05D005809 ORTHO05D007259 5.6e-71 271.6 227 62.6
Phvul.009G195100 Phaseolus vulgaris HOM05D005809 ORTHO05D007259 7.3e-71 271.2 227 62.6
Lj6g0016819 Lotus japonicus HOM05D005809 ORTHO05D007259 1.3e-70 270.4 231 60.6
CARHR271730 Cardamine hirsuta HOM05D005809 ORTHO05D007259 2.1e-70 269.6 229 62.9
Nn8g39891 Nelumbo nucifera HOM05D005809 ORTHO05D007259 2.8e-70 269.2 227 61.2
Atru.chr7.51 Acer truncatum HOM05D005809 ORTHO05D007259 3.6e-70 268.9 227 61.7
Potri.006G184600 Populus trichocarpa HOM05D005809 ORTHO05D007259 3.6e-70 268.9 228 62.7
Medtr2g460780 Medicago truncatula HOM05D005809 ORTHO05D007259 4.8e-70 268.5 230 61.3
PGR102G1797 Punica granatum HOM05D005809 ORTHO05D007259 4.8e-70 268.5 229 61.6
HanXRQChr17g0552351 Helianthus annuus HOM05D005809 ORTHO05D007259 8.1e-70 267.7 226 62.4
TWI34G1090 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 1.1e-69 267.3 234 61.1
Carub.0008s1848 Capsella rubella HOM05D005809 ORTHO05D007259 1.4e-69 266.9 227 61.7
MELO3C004136.2 Cucumis melo HOM05D005809 ORTHO05D007259 3.1e-69 265.8 231 59.7
Psat1g021800 Pisum sativum HOM05D005809 ORTHO05D007259 9.0e-69 264.2 226 60.2
CAN.G160.58 Capsicum annuum HOM05D005809 ORTHO05D007259 1.2e-68 263.8 230 63.0
Manes.06G033951 Manihot esculenta HOM05D005809 ORTHO05D007259 1.2e-68 263.8 233 61.4
CsaV3_2G007490 Cucumis sativus L. HOM05D005809 ORTHO05D007259 1.5e-68 263.5 230 59.1
Sp6g19620 Schrenkiella parvula HOM05D005809 ORTHO05D007259 1.5e-68 263.5 227 60.8
AL8G34030 Arabidopsis lyrata HOM05D005809 ORTHO05D007259 2.6e-68 262.7 227 60.8
Sed0001225 Sechium edule HOM05D005809 ORTHO05D007259 4.5e-68 261.9 232 58.2
Sabra06G0140200 Salix brachista HOM05D005809 ORTHO05D007259 9.9e-68 260.8 229 60.7
Ah.02g128190 Amaranthus hybridus HOM05D005809 ORTHO05D007259 1.3e-67 260.4 226 60.6
Glyma.06G219200 Glycine max HOM05D005809 ORTHO05D007259 1.3e-67 260.4 226 61.1
THA.LOC104817821 Tarenaya hassleriana HOM05D005809 ORTHO05D007259 1.3e-67 260.4 227 61.2
Glyma.06G219400 Glycine max HOM05D005809 ORTHO05D007259 1.7e-67 260.0 229 60.3
Aqoxy2G02328 Aquilegia oxysepala HOM05D005809 ORTHO05D007259 2.2e-67 259.6 226 61.1
Duzib168G0271 Durio zibethinus HOM05D005809 ORTHO05D007259 2.2e-67 259.6 222 63.1
FvH4_1g00940 Fragaria vesca HOM05D005809 ORTHO05D007259 2.2e-67 259.6 219 62.1
Sc08g0005640 Simmondsia chinensis HOM05D005809 ORTHO05D007259 2.2e-67 259.6 226 59.3
BraA10t43609Z Brassica rapa HOM05D005809 ORTHO05D007259 3.8e-67 258.8 226 60.2
SGA_v2.0_scaffold265G46107 Striga asiatica HOM05D005809 ORTHO05D007259 4.9e-67 258.5 219 63.0
TWI32G0918 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 1.1e-66 257.3 226 59.7
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 2.4e-66 256.1 226 60.2
A10p16200 Brassica napus HOM05D005809 ORTHO05D007259 5.5e-66 255.0 226 59.7
AT5G57950 Arabidopsis thaliana HOM05D005809 ORTHO05D007259 7.1e-66 254.6 228 58.8
Cpa.g.sc46.154 Carica papaya HOM05D005809 ORTHO05D007259 2.1e-65 253.1 222 62.2
Lsat_1_v5_gn_8_63301 Lactuca sativa HOM05D005809 ORTHO05D007259 2.1e-65 253.1 238 57.6
C09p49790 Brassica napus HOM05D005809 ORTHO05D007259 5.1e-64 248.4 226 59.7
Nitab4.5_0005653g0040 Nicotiana tabacum HOM05D005809 ORTHO05D007259 5.1e-64 248.4 226 60.2
BolC9t57830H Brassica oleracea HOM05D005809 ORTHO05D007259 1.1e-63 247.3 226 59.3
Peaxi162Scf00401g00082 Petunia axillaris HOM05D005809 ORTHO05D007259 1.5e-63 246.9 218 62.8
arahy.Tifrunner.gnm1.ann1.46B1EJ Arachis hypogaea HOM05D005809 ORTHO05D007259 7.4e-63 244.6 226 56.6
Haze_19206 Corylus avellana HOM05D005809 ORTHO05D007259 7.4e-63 244.6 219 61.2
PSO782G1751 Papaver somniferum HOM05D005809 ORTHO05D007259 7.4e-63 244.6 226 55.3
Thhalv10014592m.g Eutrema salsugineum HOM05D005809 ORTHO05D007259 1.6e-62 243.4 220 59.5
PSO063G2086 Papaver somniferum HOM05D005809 ORTHO05D007259 2.1e-62 243.0 226 55.3
Aa31LG3G13770 Aethionema arabicum HOM05D000853 ORTHO05D000723 4.8e-62 241.9 223 58.7
Nitab4.5_0001571g0010 Nicotiana tabacum HOM05D005809 ORTHO05D007259 8.1e-62 241.1 239 57.7
arahy.Tifrunner.gnm1.ann1.Z5GGTZ Arachis hypogaea HOM05D005809 ORTHO05D007259 1.1e-61 240.7 230 56.5
Gohir.A05G055000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 4.5e-60 235.3 229 57.2
DCAR_017909 Daucus carota HOM05D005809 ORTHO05D007259 1.3e-59 233.8 249 54.2
Actinidia04301 Actinidia chinensis HOM05D005809 ORTHO05D007259 4.9e-59 231.9 227 57.7
HPP92_016019 Vanilla planifolia HOM05D005809 ORTHO05D007259 4.9e-59 231.9 226 53.5
SEGI_31268 Sequoiadendron giganteum HOM05D005809 ORTHO05D007259 2.5e-58 229.6 235 53.6
vmacro16802 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 3.2e-58 229.2 282 49.3
ClCG02G014530 Citrullus lanatus HOM05D005809 ORTHO05D007259 9.3e-58 227.6 211 56.4
Rhsim01G0033400 Rhododendron simsii HOM05D005809 ORTHO05D007259 9.3e-58 227.6 228 55.7
Zm00001eb312980 Zea mays HOM05D005809 ORTHO05D007259 2.7e-57 226.1 226 52.2
ATR0739G206 Amborella trichopoda HOM05D005809 ORTHO05D007259 3.5e-57 225.7 231 57.1
Os09g0420600 Oryza sativa ssp. japonica HOM05D005809 ORTHO05D007259 5.7e-55 218.4 226 51.8
Mapoly0003s0072 Marchantia polymorpha HOM05D005809 ORTHO05D007259 9.6e-55 217.6 241 51.0
CDE12G0564 Ceratophyllum demersum HOM05D005809 ORTHO05D007259 2.8e-54 216.1 255 47.8
HPP92_016035 Vanilla planifolia HOM05D005809 ORTHO05D007259 1.4e-53 213.8 207 53.6
Hund01517 Selenicereus undatus HOM05D005809 ORTHO05D007259 7.6e-52 208.0 219 52.5
Pp3c8_2960 Physcomitrium patens HOM05D005809 ORTHO05D007259 1.0e-51 207.6 235 48.9
SMO361G0343 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 2.2e-51 206.5 231 48.5
AagrBONN_evm.TU.Sc2ySwM_117.3948 Anthoceros agrestis HOM05D005809 ORTHO05D007259 1.9e-50 203.4 235 48.9
SMO361G0248 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 2.7e-49 199.5 225 48.9
AUR62035200 Chenopodium quinoa HOM05D005809 ORTHO05D007259 4.6e-49 198.7 226 50.0
Lj9C717G7 Lonicera japonica HOM05D005809 ORTHO05D007259 8.7e-48 194.5 219 53.9
FAN28G0834 Fragaria x ananassa HOM05D005809 ORTHO05D007259 4.3e-47 192.2 227 48.9
Pp3c16_13530 Physcomitrium patens HOM05D005809 ORTHO05D007259 1.6e-46 190.3 223 47.1
Dinv42856 Davidia involucrata HOM05D005809 ORTHO05D007259 3.7e-46 189.1 166 62.0
Actinidia38322 Actinidia chinensis HOM05D005809 ORTHO05D007259 4.8e-46 188.7 193 58.5
Hma1.2p1_0010F.1_g006710 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 3.8e-43 179.1 158 60.1
vmacro05441 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 1.4e-42 177.2 191 52.4
SHI02853 Sapria himalayana HOM05D005809 ORTHO05D007259 1.2e-41 174.1 216 47.2
Sed0002126 Sechium edule HOM05D005809 ORTHO05D007259 1.2e-36 157.5 161 54.7
CBR_g38078 Chara braunii HOM05D000019 ORTHO05D000048 5.5e-34 148.7 266 35.0
Cc06_g14990 Coffea canephora HOM05D005809 ORTHO05D007259 2.3e-32 143.3 101 70.3
Oeu007777.1 Olea europaea HOM05D005809 ORTHO05D007259 2.2e-30 136.7 91 73.6
Oeu038698.1 Olea europaea HOM05D005809 ORTHO05D007259 1.4e-29 134.0 91 71.4
Oeu049715.1 Olea europaea HOM05D005809 ORTHO05D007259 1.8e-29 133.7 91 71.4
Cc06_g14980 Coffea canephora HOM05D005809 ORTHO05D007259 9.1e-29 131.3 103 67.0
Oeu017561.1 Olea europaea HOM05D005809 ORTHO05D007259 1.6e-28 130.6 91 70.3
FAN21G3780 Fragaria x ananassa HOM05D005809 ORTHO05D007259 3.5e-28 129.4 189 45.0
RcHm_v2.0_Chr5g0031291 Rosa chinensis HOM05D005809 ORTHO05D007259 2.9e-27 126.3 140 52.1
MCO13G469 Micromonas commoda HOM05D005809 ORTHO05D007259 1.1e-26 124.4 220 35.5
Aa31LG1G19310 Aethionema arabicum HOM05D005809 ORTHO05D007259 4.7e-25 119.0 92 64.1
FAN25G0559 Fragaria x ananassa HOM05D005809 ORTHO05D007259 6.1e-25 118.6 102 57.8
EL10As1g23143 Beta vulgaris HOM05D005809 ORTHO05D007259 1.0e-24 117.9 98 63.3
Cre04.g226950 Chlamydomonas reinhardtii HOM05D005809 ORTHO05D007259 2.6e-23 113.2 274 30.7
Oeu029241.1 Olea europaea HOM05D005809 ORTHO05D007259 1.6e-20 104.0 77 63.6
Hma1.2p1_0222F.1_g093570 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 1.0e-19 101.3 74 67.6
EL10As1g23140 Beta vulgaris HOM05D005809 ORTHO05D007259 2.5e-18 96.7 63 76.2
FvH4_3g18530 Fragaria vesca HOM05D005809 ORTHO05D007259 4.7e-17 92.4 162 40.7
FAN11G2737 Fragaria x ananassa HOM05D005809 ORTHO05D007259 4.7e-17 92.4 162 40.7
PRCOL_00000214 Prasinoderma coloniale HOM05D005809 ORTHO05D007259 6.8e-16 88.6 196 30.6
FAN26G2229 Fragaria x ananassa HOM05D005809 ORTHO05D007259 4.1e-13 79.3 61 62.3
MD09G1175000 Malus domestica HOM05D005809 ORTHO05D007259 5.4e-13 79.0 86 51.2
CSS0015204 Camellia sinensis var. sinensis HOM05D000853 ORTHO05D000723 4.7e-09 65.9 72 54.2
vmacro11582 Vaccinium macrocarpon HOM05D005809 ORTHO05D010075 1.4e-08 64.3 54 61.1


User provided reference genes

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