Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052135.1 Olea europaea HOM05D005874 ORTHO05D007206 8.5e-208 726.9 393 100.0
Migut.L01513 Erythranthe guttata HOM05D005874 ORTHO05D007206 2.2e-171 605.9 393 76.8
MSTRG.10544 Avicennia marina HOM05D005874 ORTHO05D007206 4.0e-165 585.1 393 75.3
Hma1.2p1_0071F.1_g037960 Hydrangea macrophylla HOM05D005874 ORTHO05D007206 9.8e-164 580.5 393 71.5
QL03p002925 Quercus lobata HOM05D005874 ORTHO05D007206 1.3e-160 570.1 392 70.7
GSVIVG01022009001 Vitis vinifera HOM05D005874 ORTHO05D007206 7.3e-159 564.3 394 70.6
CSS0017417 Camellia sinensis var. sinensis HOM05D005874 ORTHO05D007206 9.5e-159 563.9 417 68.6
CsaV3_3G003940 Cucumis sativus L. HOM05D005874 ORTHO05D007206 9.5e-159 563.9 393 70.7
MELO3C014079.2 Cucumis melo HOM05D005874 ORTHO05D007206 1.6e-158 563.1 393 70.7
Cc02_g32810 Coffea canephora HOM05D005874 ORTHO05D007206 6.2e-158 561.2 390 76.2
Lsat_1_v5_gn_4_139320 Lactuca sativa HOM05D005874 ORTHO05D007206 3.4e-156 555.4 392 69.4
CiPaw.07G012300 Carya illinoinensis HOM05D005874 ORTHO05D007206 7.6e-156 554.3 393 69.2
HanXRQChr09g0254601 Helianthus annuus HOM05D005874 ORTHO05D007206 7.6e-156 554.3 397 68.0
TAR362G0076 Trochodendron aralioides HOM05D005874 ORTHO05D007206 7.6e-156 554.3 392 74.7
CANSAT54G0668 Cannabis sativa HOM05D005874 ORTHO05D007206 1.3e-155 553.5 385 77.4
Dinv22927 Davidia involucrata HOM05D005874 ORTHO05D007206 2.9e-155 552.4 393 70.5
Actinidia05739 Actinidia chinensis HOM05D005874 ORTHO05D007206 1.1e-154 550.4 391 69.6
ECA232G3849 Erigeron canadensis HOM05D005874 ORTHO05D007206 2.4e-154 549.3 394 68.5
Sopen08g010120 Solanum pennellii HOM05D005874 ORTHO05D007206 4.6e-153 545.0 393 69.5
Actinidia30901 Actinidia chinensis HOM05D005874 ORTHO05D007206 7.8e-153 544.3 393 71.2
Ciclev10001418m.g Citrus clementina HOM05D005874 ORTHO05D007206 1.0e-152 543.9 394 74.1
Solyc08g029200.3 Solanum lycopersicum HOM05D005874 ORTHO05D007206 1.0e-152 543.9 393 69.2
CAN.G56.14 Capsicum annuum HOM05D005874 ORTHO05D007206 3.0e-152 542.3 393 69.5
Glyma.19G239400 Glycine max HOM05D005874 ORTHO05D007206 6.6e-152 541.2 393 68.4
Prupe.6G333100 Prunus persica HOM05D005874 ORTHO05D007206 1.9e-151 539.7 394 68.3
arahy.Tifrunner.gnm1.ann1.QVQE66 Arachis hypogaea HOM05D005874 ORTHO05D007206 3.3e-151 538.9 393 69.5
Sc06g0003460 Simmondsia chinensis HOM05D005874 ORTHO05D007206 3.3e-151 538.9 392 68.4
Aqoxy5G00596 Aquilegia oxysepala HOM05D005874 ORTHO05D007206 5.6e-151 538.1 388 69.1
arahy.Tifrunner.gnm1.ann1.MWM6LR Arachis hypogaea HOM05D005874 ORTHO05D007206 9.6e-151 537.3 393 69.2
MD04G1213200 Malus domestica HOM05D005874 ORTHO05D007206 1.2e-150 537.0 394 68.8
Phvul.006G096000 Phaseolus vulgaris HOM05D005874 ORTHO05D007206 1.2e-150 537.0 391 67.3
Lj1g0003731 Lotus japonicus HOM05D005874 ORTHO05D007206 3.6e-150 535.4 393 72.8
QL03p003516 Quercus lobata HOM05D005874 ORTHO05D007206 3.6e-150 535.4 469 58.8
Rhsim07G0178000 Rhododendron simsii HOM05D005874 ORTHO05D007206 4.7e-150 535.0 405 71.9
MD12G1227400 Malus domestica HOM05D005874 ORTHO05D007206 6.2e-150 534.6 394 68.8
Lalb_Chr15g0077001 Lupinus albus HOM05D005874 ORTHO05D007206 1.4e-149 533.5 391 69.1
RcHm_v2.0_Chr3g0453421 Rosa chinensis HOM05D005874 ORTHO05D007206 1.4e-149 533.5 394 67.5
Glyma.03G242000 Glycine max HOM05D005874 ORTHO05D007206 2.4e-149 532.7 393 67.4
FvH4_6g04920 Fragaria vesca HOM05D005874 ORTHO05D007206 1.2e-148 530.4 394 66.8
FAN05G2497 Fragaria x ananassa HOM05D005874 ORTHO05D007206 4.4e-148 528.5 394 66.5
FAN09G3845 Fragaria x ananassa HOM05D005874 ORTHO05D007206 1.3e-147 526.9 394 66.5
FAN05G4189 Fragaria x ananassa HOM05D005874 ORTHO05D007206 1.7e-147 526.6 394 66.2
PSO832G1738 Papaver somniferum HOM05D005874 ORTHO05D007206 2.2e-147 526.2 390 66.4
TWI36G0483 Tripterygium wilfordii HOM05D005874 ORTHO05D007206 4.9e-147 525.0 393 64.9
Ah.04g159940 Amaranthus hybridus HOM05D005874 ORTHO05D007206 3.2e-146 522.3 392 66.1
Gohir.D13G178100 Gossypium hirsutum HOM05D005874 ORTHO05D007206 1.2e-145 520.4 394 67.0
Medtr7g114080 Medicago truncatula HOM05D005874 ORTHO05D007206 1.2e-145 520.4 394 66.5
VMungo0540G0326 Vigna mungo HOM05D005874 ORTHO05D007206 1.6e-145 520.0 379 67.0
vmacro05048 Vaccinium macrocarpon HOM05D005874 ORTHO05D007206 4.6e-145 518.5 440 65.0
Gorai.013G203400 Gossypium raimondii HOM05D005874 ORTHO05D007206 1.0e-144 517.3 394 66.8
Psat3g009240 Pisum sativum HOM05D005874 ORTHO05D007206 2.3e-144 516.2 395 66.8
TPR.G21789 Trifolium pratense HOM05D005874 ORTHO05D007206 5.1e-144 515.0 395 66.1
FAN14G1317 Fragaria x ananassa HOM05D005874 ORTHO05D007206 5.6e-143 511.5 394 65.2
Atru.chr2.537 Acer truncatum HOM05D005874 ORTHO05D007206 1.2e-140 503.8 363 68.0
THA.LOC104818669 Tarenaya hassleriana HOM05D005874 ORTHO05D007206 1.2e-140 503.8 395 69.9
Eucgr.B02032 Eucalyptus grandis HOM05D005874 ORTHO05D007206 3.8e-139 498.8 391 63.2
unitig_578.g16415 Utricularia gibba HOM05D005874 ORTHO05D007206 2.4e-138 496.1 373 66.5
Sp2g20520 Schrenkiella parvula HOM05D005874 ORTHO05D007206 2.1e-137 493.0 392 66.8
Cpa.g.sc84.114 Carica papaya HOM05D005874 ORTHO05D007206 4.6e-137 491.9 394 64.0
Duzib128G0205 Durio zibethinus HOM05D005874 ORTHO05D007206 1.3e-136 490.3 363 72.5
THA.LOC104802814 Tarenaya hassleriana HOM05D005874 ORTHO05D007206 3.9e-136 488.8 391 69.1
Thhalv10004370m.g Eutrema salsugineum HOM05D005874 ORTHO05D007206 2.5e-135 486.1 392 66.3
PGR031G1977 Punica granatum HOM05D005874 ORTHO05D007206 9.0e-133 477.6 395 68.1
BraA09t36161Z Brassica rapa HOM05D005874 ORTHO05D007206 1.2e-132 477.2 392 61.2
PSO210G2121 Papaver somniferum HOM05D005874 ORTHO05D007206 1.2e-132 477.2 351 67.0
A09p05220 Brassica napus HOM05D005874 ORTHO05D007206 2.6e-132 476.1 392 61.0
BcaC04g23685 Brassica carinata HOM05D005874 ORTHO05D007206 5.8e-132 474.9 392 60.7
C09p05680 Brassica napus HOM05D005874 ORTHO05D007206 5.8e-132 474.9 392 60.7
BolC9t53497H Brassica oleracea HOM05D005874 ORTHO05D007206 5.8e-132 474.9 392 60.7
HPP92_003153 Vanilla planifolia HOM05D005874 ORTHO05D007206 1.1e-130 470.7 389 59.4
BcaC04g23688 Brassica carinata HOM05D005874 ORTHO05D007206 1.9e-130 469.9 392 61.0
Carub.0003s0419 Capsella rubella HOM05D005874 ORTHO05D007206 1.9e-130 469.9 398 64.8
Aa31LG5G15480 Aethionema arabicum HOM05D005874 ORTHO05D007206 4.2e-130 468.8 387 61.2
Thecc.05G296800 Theobroma cacao HOM05D005874 ORTHO05D007206 2.7e-129 466.1 339 74.0
CARHR185900 Cardamine hirsuta HOM05D005874 ORTHO05D007206 3.5e-129 465.7 390 63.3
ATR0487G009 Amborella trichopoda HOM05D005874 ORTHO05D007206 1.0e-128 464.2 395 60.0
Os03g0363900 Oryza sativa ssp. japonica HOM05D005874 ORTHO05D007206 3.9e-128 462.2 390 59.2
SGA_v2.0_scaffold21G09411 Striga asiatica HOM05D005874 ORTHO05D007206 5.6e-127 458.4 367 65.9
Thhalv10020879m.g Eutrema salsugineum HOM05D005874 ORTHO05D007206 1.6e-126 456.8 387 64.6
BcaC05g29976 Brassica carinata HOM05D005874 ORTHO05D007206 2.1e-126 456.4 381 65.4
C05p62300 Brassica napus HOM05D005874 ORTHO05D007206 2.4e-125 453.0 381 65.9
Peaxi162Scf00071g00714 Petunia axillaris HOM05D005874 ORTHO05D007206 9.0e-125 451.1 391 60.6
BolC5t34886H Brassica oleracea HOM05D005874 ORTHO05D007206 2.0e-124 449.9 381 65.1
CDE12G0821 Ceratophyllum demersum HOM05D005874 ORTHO05D007206 2.0e-124 449.9 390 57.4
BraA05t22992Z Brassica rapa HOM05D005874 ORTHO05D007206 3.5e-121 439.1 388 63.1
EL10Ac4g09284 Beta vulgaris HOM05D005874 ORTHO05D007206 7.9e-121 438.0 394 62.2
Dinv40230 Davidia involucrata HOM05D005874 ORTHO05D007206 1.3e-120 437.2 301 72.1
A05p42610 Brassica napus HOM05D005874 ORTHO05D007206 2.3e-120 436.4 388 62.6
DCAR_001932 Daucus carota HOM05D005638 ORTHO05D006913 5.1e-120 435.3 320 65.9
Hund07023 Selenicereus undatus HOM05D005874 ORTHO05D007206 8.7e-120 434.5 394 56.9
Cfa006515 Carpinus fangiana HOM05D005874 ORTHO05D007206 1.5e-119 433.7 326 64.7
BcaB04g19660 Brassica carinata HOM05D005874 ORTHO05D007206 6.3e-118 428.3 371 59.0
Gohir.A13G172200 Gossypium hirsutum HOM05D005874 ORTHO05D007206 1.4e-117 427.2 394 58.1
BcaB04g19663 Brassica carinata HOM05D005874 ORTHO05D007206 3.2e-114 416.0 392 56.4
Zm00001eb394310 Zea mays HOM05D005874 ORTHO05D007206 9.3e-114 414.5 391 54.5
Haze_04267 Corylus avellana HOM05D005874 ORTHO05D007206 8.7e-112 407.9 393 53.9
Lj9A677G37 Lonicera japonica HOM05D005874 ORTHO05D007206 9.7e-111 404.4 346 66.8
COL.COLO4_13564 Corchorus olitorius HOM05D005874 ORTHO05D007206 5.3e-109 398.7 291 74.2
Nitab4.5_0005924g0020 Nicotiana tabacum HOM05D005874 ORTHO05D007206 9.4e-106 387.9 348 60.1
Sabra05G0040000 Salix brachista HOM05D005874 ORTHO05D007206 3.0e-104 382.9 473 47.1
Nn4g26084 Nelumbo nucifera HOM05D005874 ORTHO05D007206 5.9e-100 368.6 280 65.7
Manes.08G125000 Manihot esculenta HOM05D005874 ORTHO05D007206 6.5e-99 365.2 261 77.0
Sed0024795 Sechium edule HOM05D005083 ORTHO05D006310 1.1e-98 364.4 259 68.7
Aa31LG11G9040 Aethionema arabicum HOM05D005874 ORTHO05D007206 7.9e-97 358.2 301 60.1
CARHR079280 Cardamine hirsuta HOM05D005874 ORTHO05D007206 1.3e-94 350.9 311 65.9
AT3G04970 Arabidopsis thaliana HOM05D005874 ORTHO05D007206 3.7e-94 349.4 309 66.3
Potri.005G041000 Populus trichocarpa HOM05D005874 ORTHO05D007206 2.4e-93 346.7 259 72.2
AL3G15310 Arabidopsis lyrata HOM05D005874 ORTHO05D007206 4.5e-92 342.4 310 64.8
SEGI_36862 Sequoiadendron giganteum HOM05D005874 ORTHO05D007206 1.2e-81 307.8 323 49.8
Atru.chr2.564 Acer truncatum HOM05D005874 ORTHO05D007206 2.8e-78 296.6 299 53.2
Mapoly0004s0142 Marchantia polymorpha HOM05D005874 ORTHO05D007206 1.1e-77 294.7 390 44.6
Sp3g03790 Schrenkiella parvula HOM05D005874 ORTHO05D007206 7.2e-74 282.0 251 65.3
Lj9A680G39 Lonicera japonica HOM05D005874 ORTHO05D007206 1.2e-65 254.6 211 62.1
SMO356G0262 Selaginella moellendorffii HOM05D005874 ORTHO05D007206 1.2e-60 238.0 298 46.3
AUR62000904 Chenopodium quinoa HOM05D005874 ORTHO05D007206 3.5e-60 236.5 190 62.6
QL03p003187 Quercus lobata HOM05D005874 ORTHO05D007206 2.3e-59 233.8 266 51.5
CBR_g48996 Chara braunii HOM05D000019 ORTHO05D001702 8.9e-56 221.9 317 46.4
Pp3c9_17640 Physcomitrium patens HOM05D005874 ORTHO05D007206 2.0e-52 210.7 309 45.0
AUR62005071 Chenopodium quinoa HOM05D005874 ORTHO05D007206 1.9e-50 204.1 161 62.7
AagrBONN_evm.TU.Sc2ySwM_362.837 Anthoceros agrestis HOM05D005874 ORTHO05D007206 3.7e-46 189.9 207 43.0
Ca_09385_v3 Cicer arietinum L. HOM05D005874 ORTHO05D007206 1.9e-45 187.6 143 65.7
Duzib192G0912 Durio zibethinus HOM05D005874 ORTHO05D007206 1.3e-43 181.4 152 61.2
Duzib192G0784 Durio zibethinus HOM05D005874 ORTHO05D007206 1.7e-43 181.0 158 58.9
FAN14G2574 Fragaria x ananassa HOM05D005874 ORTHO05D007206 2.3e-43 180.6 124 71.0
Duzib192G0855 Durio zibethinus HOM05D005874 ORTHO05D007206 1.9e-42 177.6 152 60.5
Cre02.g090100 Chlamydomonas reinhardtii HOM05D005874 ORTHO05D007206 2.8e-33 147.1 385 30.1
Nitab4.5_0005924g0010 Nicotiana tabacum HOM05D005874 ORTHO05D007206 3.8e-30 136.7 81 80.2
Nitab4.5_0000176g0130 Nicotiana tabacum HOM05D005874 ORTHO05D007206 3.2e-29 133.7 81 77.8
Duzib192G0979 Durio zibethinus HOM05D005874 ORTHO05D007206 4.5e-23 113.2 89 66.3
MCO05G448 Micromonas commoda HOM05D005874 ORTHO05D007206 9.9e-23 112.1 287 26.1
Gorai.004G244300 Gossypium raimondii HOM05D005874 ORTHO05D007206 1.1e-21 108.6 147 46.3
Nitab4.5_0000176g0140 Nicotiana tabacum HOM05D005874 ORTHO05D007206 5.1e-19 99.8 57 86.0
C04p14840 Brassica napus HOM05D005874 ORTHO05D007206 5.3e-16 89.7 78 55.1
BolC4t23058H Brassica oleracea HOM05D008292 ORTHO05D003352 5.3e-16 89.7 78 55.1
BcaC02g11489 Brassica carinata HOM05D005874 ORTHO05D007206 6.9e-16 89.4 78 55.1
PRCOL_00005730 Prasinoderma coloniale HOM05D005874 ORTHO05D007206 5.8e-15 86.3 388 24.5
C02p36570 Brassica napus HOM05D005874 ORTHO05D007206 3.5e-12 77.0 57 59.6
Duzib177G0334 Durio zibethinus HOM05D000092 ORTHO05D000042 1.3e-09 68.6 138 34.1


User provided reference genes

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