Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052126.1 Olea europaea HOM05D005294 ORTHO05D006720 8.9e-151 537.0 279 100.0
Nitab4.5_0004011g0060 Nicotiana tabacum HOM05D005294 ORTHO05D006720 3.4e-78 295.8 324 54.3
MSTRG.19532 Avicennia marina HOM05D005294 ORTHO05D006720 5.9e-78 295.0 321 53.6
Nitab4.5_0001492g0020 Nicotiana tabacum HOM05D005294 ORTHO05D006720 2.9e-77 292.7 324 54.0
Dinv36732 Davidia involucrata HOM05D005294 ORTHO05D006720 3.8e-77 292.4 327 53.8
Actinidia39748 Actinidia chinensis HOM05D005294 ORTHO05D006720 2.5e-76 289.7 323 52.9
CSS0007070 Camellia sinensis var. sinensis HOM05D005294 ORTHO05D006720 1.0e-74 284.3 329 51.4
Peaxi162Scf01468g00004 Petunia axillaris HOM05D005294 ORTHO05D006720 1.4e-74 283.9 325 52.9
CSS0004577 Camellia sinensis var. sinensis HOM05D005294 ORTHO05D006720 1.8e-74 283.5 329 51.1
Rhsim05G0031400 Rhododendron simsii HOM05D005294 ORTHO05D006720 3.3e-73 279.3 324 51.9
SGA_v2.0_scaffold62G21576 Striga asiatica HOM05D005294 ORTHO05D006720 7.4e-73 278.1 351 49.0
Lj7C671G8 Lonicera japonica HOM05D005294 ORTHO05D006720 2.2e-72 276.6 326 50.9
Cc06_g10960 Coffea canephora HOM05D005294 ORTHO05D006720 3.7e-72 275.8 325 51.7
vmacro10822 Vaccinium macrocarpon HOM05D005294 ORTHO05D006720 2.4e-71 273.1 325 50.5
CAN.G142.7 Capsicum annuum HOM05D005294 ORTHO05D006720 1.2e-70 270.8 329 49.8
Ciclev10008203m.g Citrus clementina HOM05D005294 ORTHO05D006720 5.9e-70 268.5 328 48.8
Migut.J00438 Erythranthe guttata HOM05D005294 ORTHO05D006720 7.7e-70 268.1 321 48.3
PGSC0003DMG400033362 Solanum tuberosum HOM05D005294 ORTHO05D006720 1.0e-69 267.7 329 49.2
Solyc02g068580.1 Solanum lycopersicum HOM05D005294 ORTHO05D006720 1.7e-69 266.9 315 50.5
Sopen02g017740 Solanum pennellii HOM05D005294 ORTHO05D006720 2.2e-69 266.5 315 50.8
Cpa.g.sc32.101 Carica papaya HOM05D005294 ORTHO05D006720 5.0e-69 265.4 322 48.1
Lsat_1_v5_gn_5_146040 Lactuca sativa HOM05D005294 ORTHO05D006720 5.5e-68 261.9 321 48.0
HanXRQChr12g0355321 Helianthus annuus HOM05D005294 ORTHO05D006720 2.1e-67 260.0 322 46.6
ECA234G1346 Erigeron canadensis HOM05D005294 ORTHO05D006720 2.7e-67 259.6 324 46.9
DCAR_012006 Daucus carota HOM05D005294 ORTHO05D006720 4.7e-67 258.8 327 48.3
Haze_25869 Corylus avellana HOM05D005294 ORTHO05D006720 6.1e-67 258.5 328 47.9
TWI34G0876 Tripterygium wilfordii HOM05D005294 ORTHO05D006720 6.1e-67 258.5 324 47.2
COL.COLO4_18242 Corchorus olitorius HOM05D005294 ORTHO05D006720 3.9e-66 255.8 329 47.7
Potri.013G068200 Populus trichocarpa HOM05D005294 ORTHO05D006720 8.8e-66 254.6 323 47.7
Hund05510 Selenicereus undatus HOM05D005294 ORTHO05D006720 1.5e-65 253.8 331 46.5
Atru.chr7.1522 Acer truncatum HOM05D005294 ORTHO05D006720 2.0e-65 253.4 327 46.2
Gohir.D06G069100 Gossypium hirsutum HOM05D005294 ORTHO05D006720 3.3e-65 252.7 325 48.3
Gorai.010G080700 Gossypium raimondii HOM05D005294 ORTHO05D006720 3.3e-65 252.7 325 48.3
QL02p063470 Quercus lobata HOM05D005294 ORTHO05D006720 3.3e-65 252.7 329 46.8
CiPaw.03G219800 Carya illinoinensis HOM05D005294 ORTHO05D006720 7.4e-65 251.5 324 45.4
CANSAT64G1758 Cannabis sativa HOM05D005294 ORTHO05D006720 1.3e-64 250.8 324 46.6
Thecc.09G094300 Theobroma cacao HOM05D005294 ORTHO05D006720 1.3e-64 250.8 335 47.5
Manes.16G105100 Manihot esculenta HOM05D005294 ORTHO05D006720 1.7e-64 250.4 323 46.1
TWI63G0491 Tripterygium wilfordii HOM05D005294 ORTHO05D006720 1.7e-64 250.4 324 46.3
TAR624G1381 Trochodendron aralioides HOM05D005294 ORTHO05D006720 1.7e-64 250.4 324 47.2
Sc08g0008210 Simmondsia chinensis HOM05D005294 ORTHO05D006720 2.2e-64 250.0 322 48.4
GSVIVG01015248001 Vitis vinifera HOM05D005294 ORTHO05D006720 6.3e-64 248.4 325 46.2
Sabra13G0059500 Salix brachista HOM05D005294 ORTHO05D006720 1.1e-63 247.7 375 42.9
Duzib168G2227 Durio zibethinus HOM05D005294 ORTHO05D006720 1.4e-63 247.3 326 46.6
MD15G1202500 Malus domestica HOM05D005294 ORTHO05D006720 2.4e-63 246.5 328 47.0
Prupe.7G214700 Prunus persica HOM05D005294 ORTHO05D006720 3.1e-63 246.1 327 45.6
Eucgr.C03688 Eucalyptus grandis HOM05D005294 ORTHO05D006720 4.1e-63 245.7 324 45.7
Gohir.A06G070500 Gossypium hirsutum HOM05D005294 ORTHO05D006720 5.3e-63 245.4 325 47.4
Cfa003134 Carpinus fangiana HOM05D005294 ORTHO05D006720 9.1e-63 244.6 316 46.2
Lalb_Chr18g0053011 Lupinus albus HOM05D005294 ORTHO05D006720 3.5e-62 242.7 325 45.5
MD02G1072700 Malus domestica HOM05D005294 ORTHO05D006720 4.5e-62 242.3 325 46.8
arahy.Tifrunner.gnm1.ann1.T94LMP Arachis hypogaea HOM05D005294 ORTHO05D006720 7.7e-62 241.5 325 45.5
Ah.15g091540 Amaranthus hybridus HOM05D005294 ORTHO05D006720 1.0e-61 241.1 323 44.6
arahy.Tifrunner.gnm1.ann1.CWN4E9 Arachis hypogaea HOM05D005294 ORTHO05D006720 1.3e-61 240.7 327 44.3
FvH4_1g06810 Fragaria vesca HOM05D005294 ORTHO05D006720 6.5e-61 238.4 323 46.1
RcHm_v2.0_Chr2g0092581 Rosa chinensis HOM05D005294 ORTHO05D006720 8.5e-61 238.0 323 44.6
FAN19G0312 Fragaria x ananassa HOM05D005294 ORTHO05D006720 1.1e-60 237.7 323 46.1
FAN26G0700 Fragaria x ananassa HOM05D005294 ORTHO05D006720 1.5e-60 237.3 323 45.8
LjContig00141g0021499 Lotus japonicus HOM05D005294 ORTHO05D006720 1.5e-60 237.3 324 45.7
VMungo0647G0234 Vigna mungo HOM05D005294 ORTHO05D006720 2.5e-60 236.5 324 45.7
Glyma.02G250900 Glycine max HOM05D005294 ORTHO05D006720 3.2e-60 236.1 324 44.8
TPR.G25848 Trifolium pratense HOM05D005294 ORTHO05D006720 3.2e-60 236.1 323 43.7
FAN26G2354 Fragaria x ananassa HOM05D005294 ORTHO05D006720 4.7e-59 232.3 323 45.5
Medtr5g080780 Medicago truncatula HOM05D005294 ORTHO05D006720 4.7e-59 232.3 323 43.3
FAN23G1873 Fragaria x ananassa HOM05D005294 ORTHO05D006720 6.1e-59 231.9 309 47.6
SGA_v2.0_scaffold10G05199 Striga asiatica HOM05D005294 ORTHO05D006720 8.0e-59 231.5 280 50.0
EL10Ac7g17721 Beta vulgaris HOM05D005294 ORTHO05D006720 1.4e-58 230.7 324 43.5
Glyma.14G065800 Glycine max HOM05D005294 ORTHO05D006720 1.4e-58 230.7 324 44.4
AUR62008827 Chenopodium quinoa HOM05D005294 ORTHO05D006720 2.3e-58 229.9 325 43.7
PSO210G3043 Papaver somniferum HOM05D005294 ORTHO05D006720 5.2e-58 228.8 323 43.3
Psat2g038680 Pisum sativum HOM05D005294 ORTHO05D006720 5.2e-58 228.8 323 42.7
A03p13220 Brassica napus HOM05D005294 ORTHO05D006720 1.2e-57 227.6 324 41.4
THA.LOC104811733 Tarenaya hassleriana HOM05D005294 ORTHO05D006720 1.2e-57 227.6 323 41.5
Phvul.008G230500 Phaseolus vulgaris HOM05D005294 ORTHO05D006720 2.6e-57 226.5 329 42.6
Aqoxy7G03926 Aquilegia oxysepala HOM05D005294 ORTHO05D006720 4.4e-57 225.7 327 44.0
BcaB01g04417 Brassica carinata HOM05D005294 ORTHO05D006720 5.7e-57 225.3 318 41.8
PGR102G3363 Punica granatum HOM05D005294 ORTHO05D006720 5.7e-57 225.3 325 41.8
BraA03t10634Z Brassica rapa HOM05D005294 ORTHO05D006720 7.5e-57 224.9 324 41.0
Carub.0008s1722 Capsella rubella HOM05D005294 ORTHO05D006720 7.5e-57 224.9 323 41.5
AT5G56740 Arabidopsis thaliana HOM05D005294 ORTHO05D006720 9.7e-57 224.6 328 42.4
A10p14080 Brassica napus HOM05D005294 ORTHO05D006720 1.3e-56 224.2 323 41.8
BraA10t43499Z Brassica rapa HOM05D005294 ORTHO05D006720 1.3e-56 224.2 323 41.8
AUR62025414 Chenopodium quinoa HOM05D005294 ORTHO05D006720 1.7e-56 223.8 322 42.9
Haze_25870 Corylus avellana HOM05D005294 ORTHO05D006720 2.2e-56 223.4 303 45.2
BcaC01g06444 Brassica carinata HOM05D005294 ORTHO05D006720 2.8e-56 223.0 323 40.6
BolC3t13987H Brassica oleracea HOM05D005294 ORTHO05D006720 2.8e-56 223.0 324 40.4
AL8G32570 Arabidopsis lyrata HOM05D005294 ORTHO05D006720 3.7e-56 222.6 328 41.8
BcaB08g36064 Brassica carinata HOM05D005294 ORTHO05D006720 8.2e-56 221.5 323 41.2
C03p15490 Brassica napus HOM05D005294 ORTHO05D006720 2.4e-55 219.9 324 40.1
Lalb_Chr15g0084501 Lupinus albus HOM05D005294 ORTHO05D006720 4.1e-55 219.2 327 42.8
CARHR270490 Cardamine hirsuta HOM05D005294 ORTHO05D006720 9.1e-55 218.0 321 40.5
Thhalv10013465m.g Eutrema salsugineum HOM05D005294 ORTHO05D006720 9.1e-55 218.0 324 40.7
Sp6g18490 Schrenkiella parvula HOM05D005294 ORTHO05D006720 4.5e-54 215.7 323 40.9
Aa31LG3G12690 Aethionema arabicum HOM05D005294 ORTHO05D006720 5.9e-54 215.3 323 40.2
Ca_05904_v3 Cicer arietinum L. HOM05D005294 ORTHO05D006720 7.7e-54 214.9 322 40.7
PSO210G1233 Papaver somniferum HOM05D005294 ORTHO05D006720 7.7e-54 214.9 323 41.5
ClCG11G001870 Citrullus lanatus HOM05D005294 ORTHO05D006720 4.7e-51 205.7 324 41.4
CsaV3_2G001600 Cucumis sativus L. HOM05D005294 ORTHO05D006720 6.1e-51 205.3 326 42.0
MBI04_g06995_MAGBIO Magnolia biondii HOM05D005294 ORTHO05D006720 4.0e-50 202.6 323 40.9
unitig_26.g9161 Utricularia gibba HOM05D005294 ORTHO05D006720 4.0e-50 202.6 327 41.9
BcaC04g20057 Brassica carinata HOM05D005294 ORTHO05D006720 6.8e-50 201.8 288 41.0
Aqoxy4G01946 Aquilegia oxysepala HOM05D005294 ORTHO05D006720 2.6e-49 199.9 327 40.1
Sed0020374 Sechium edule HOM05D005294 ORTHO05D006720 4.4e-49 199.1 315 41.0
Os09g0347800 Oryza sativa ssp. japonica HOM05D005294 ORTHO05D006720 3.7e-48 196.1 316 39.6
Zm00001eb310550 Zea mays HOM05D005294 ORTHO05D006720 4.1e-47 192.6 310 40.0
C09p48310 Brassica napus HOM05D005294 ORTHO05D006720 1.0e-45 188.0 273 41.0
BolC9t57681H Brassica oleracea HOM05D005294 ORTHO05D006720 1.0e-45 188.0 288 39.6
HPP92_009085 Vanilla planifolia HOM05D005294 ORTHO05D006720 2.5e-44 183.3 333 37.2
ATR0705G179 Amborella trichopoda HOM05D005294 ORTHO05D006720 5.7e-41 172.2 332 33.1
MELO3C004615.2 Cucumis melo HOM05D005294 ORTHO05D006720 2.8e-35 153.3 154 51.3
MBI14_g43979_MAGBIO Magnolia biondii HOM05D005294 ORTHO05D006720 2.3e-34 150.2 144 53.5
Aa31LG3G12580 Aethionema arabicum HOM05D005294 ORTHO05D006720 1.8e-31 140.6 123 55.3
Aa31LG3G12620 Aethionema arabicum HOM05D005294 ORTHO05D006720 1.8e-31 140.6 123 55.3
Actinidia25279 Actinidia chinensis HOM05D005294 ORTHO05D006720 3.2e-31 139.8 252 38.5
Aa31sc2040G10 Aethionema arabicum HOM05D005294 ORTHO05D006720 3.2e-31 139.8 127 53.5
CDE09G1011 Ceratophyllum demersum HOM05D005294 ORTHO05D006720 3.2e-31 139.8 314 33.8
Nn6g35397 Nelumbo nucifera HOM05D005294 ORTHO05D006720 2.1e-27 127.1 222 38.3
SHI02790 Sapria himalayana HOM05D005294 ORTHO05D006720 3.1e-26 123.2 155 43.2
SEGI_34717 Sequoiadendron giganteum HOM05D005294 ORTHO05D006720 5.4e-23 112.5 352 27.3
Pp3c15_19200 Physcomitrium patens HOM05D005294 ORTHO05D006720 1.9e-20 104.0 351 26.2
Zm00001eb171070 Zea mays HOM05D005294 ORTHO05D006720 1.1e-18 98.2 101 46.5
Zm00001eb301910 Zea mays HOM05D005294 ORTHO05D006720 5.2e-18 95.9 101 45.5
CBR_g45363 Chara braunii HOM05D005294 ORTHO05D006720 8.3e-16 88.6 154 33.1
SGA_v2.0_scaffold194G40752 Striga asiatica HOM05D005294 ORTHO05D006720 8.3e-16 88.6 73 56.2
Mapoly0079s0005 Marchantia polymorpha HOM05D005294 ORTHO05D006720 3.5e-14 83.2 192 29.7
RcHm_v2.0_Chr2g0093931 Rosa chinensis HOM05D005294 ORTHO05D006720 1.1e-12 78.2 58 63.8
RcHm_v2.0_Chr2g0093921 Rosa chinensis HOM05D005294 ORTHO05D006720 2.4e-10 70.5 48 60.4
Aqoxy4G01951 Aquilegia oxysepala HOM05D005294 ORTHO05D006720 8.9e-10 68.6 68 52.9
CARHR271620 Cardamine hirsuta HOM05D005294 ORTHO05D006720 8.9e-10 68.6 68 47.1
PRCOL_00004982 Prasinoderma coloniale HOM05D005294 ORTHO05D006720 2.7e-06 57.0 281 24.9


User provided reference genes

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