Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052083.1 Olea europaea HOM05D006027 ORTHO05D007604 2.4e-78 295.4 147 100.0
Oeu015437.1 Olea europaea HOM05D006027 ORTHO05D007604 2.8e-71 271.9 146 91.1
Dinv43066 Davidia involucrata HOM05D006027 ORTHO05D007604 7.4e-64 247.3 146 84.2
Nitab4.5_0002435g0010 Nicotiana tabacum HOM05D006027 ORTHO05D007604 7.4e-64 247.3 145 82.8
CAN.G536.12 Capsicum annuum HOM05D006027 ORTHO05D007604 9.7e-64 246.9 145 82.8
Nitab4.5_0000845g0140 Nicotiana tabacum HOM05D006027 ORTHO05D007604 2.8e-63 245.4 145 82.1
Sopen09g025650 Solanum pennellii HOM05D006027 ORTHO05D007604 2.8e-63 245.4 145 82.1
CANSAT01G0515 Cannabis sativa HOM05D006027 ORTHO05D007604 4.8e-63 244.6 145 84.1
Solyc09g064500.3 Solanum lycopersicum HOM05D006027 ORTHO05D007604 8.2e-63 243.8 145 81.4
Migut.D00479 Erythranthe guttata HOM05D006027 ORTHO05D007604 1.1e-62 243.4 146 83.6
PGSC0003DMG400008585 Solanum tuberosum HOM05D006027 ORTHO05D007604 1.1e-62 243.4 145 81.4
Lj1C74G4 Lonicera japonica HOM05D006027 ORTHO05D007604 5.3e-62 241.1 147 83.7
CANSAT01G2333 Cannabis sativa HOM05D006027 ORTHO05D007604 6.9e-62 240.7 145 84.1
Potri.002G256400 Populus trichocarpa HOM05D006027 ORTHO05D007604 9.0e-62 240.4 145 81.4
arahy.Tifrunner.gnm1.ann1.72UZ71 Arachis hypogaea HOM05D006027 ORTHO05D007604 2.6e-61 238.8 147 80.3
arahy.Tifrunner.gnm1.ann1.FRV526 Arachis hypogaea HOM05D006027 ORTHO05D007604 2.6e-61 238.8 147 80.3
Cc01_g17770 Coffea canephora HOM05D006027 ORTHO05D007604 4.5e-61 238.0 148 80.4
SGA_v2.0_scaffold1G00660 Striga asiatica HOM05D006027 ORTHO05D007604 4.5e-61 238.0 149 81.2
Gohir.A07G152700 Gossypium hirsutum HOM05D006027 ORTHO05D007604 7.6e-61 237.3 146 82.2
Gohir.D07G158900 Gossypium hirsutum HOM05D006027 ORTHO05D007604 1.0e-60 236.9 145 81.4
Lalb_Chr06g0170731 Lupinus albus HOM05D006027 ORTHO05D007604 2.2e-60 235.7 147 81.6
Gorai.001G182100 Gossypium raimondii HOM05D006027 ORTHO05D007604 2.9e-60 235.3 146 81.5
CSS0010160 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 3.8e-60 235.0 146 78.1
DCAR_000568 Daucus carota HOM05D006027 ORTHO05D007604 5.0e-60 234.6 145 77.2
Phvul.007G153500 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 6.5e-60 234.2 147 80.3
TAR362G0914 Trochodendron aralioides HOM05D006027 ORTHO05D007604 6.5e-60 234.2 145 80.7
Glyma.13G127200 Glycine max HOM05D006027 ORTHO05D007604 8.5e-60 233.8 145 80.7
VMungo0720G1620 Vigna mungo HOM05D006027 ORTHO05D007604 8.5e-60 233.8 145 80.7
CSS0012566 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 1.1e-59 233.4 146 77.4
Glyma.10G040600 Glycine max HOM05D006027 ORTHO05D007604 1.1e-59 233.4 147 81.0
Lalb_Chr02g0152741 Lupinus albus HOM05D006027 ORTHO05D007604 3.2e-59 231.9 148 79.1
Ca_09646_v3 Cicer arietinum L. HOM05D006027 ORTHO05D007604 4.2e-59 231.5 145 79.3
Lj5g0017558 Lotus japonicus HOM05D006027 ORTHO05D007604 4.2e-59 231.5 145 79.3
QL09p041558 Quercus lobata HOM05D006027 ORTHO05D007604 4.2e-59 231.5 145 80.0
Actinidia23700 Actinidia chinensis HOM05D006027 ORTHO05D007604 5.5e-59 231.1 146 78.8
HanXRQChr01g0014971 Helianthus annuus HOM05D006027 ORTHO05D007604 5.5e-59 231.1 146 76.7
MELO3C022393.2 Cucumis melo HOM05D006027 ORTHO05D007604 7.2e-59 230.7 148 77.0
Sabra02G0194900 Salix brachista HOM05D006027 ORTHO05D007604 7.2e-59 230.7 145 78.6
Eucgr.K01424 Eucalyptus grandis HOM05D006027 ORTHO05D007604 1.2e-58 229.9 145 77.9
GSVIVG01028434001 Vitis vinifera HOM05D006027 ORTHO05D007604 1.2e-58 229.9 145 76.6
TPR.G5919 Trifolium pratense HOM05D006027 ORTHO05D007604 1.6e-58 229.6 146 78.8
FAN15G2830 Fragaria x ananassa HOM05D006027 ORTHO05D007604 2.1e-58 229.2 145 77.9
Medtr1g069465 Medicago truncatula HOM05D006027 ORTHO05D007604 3.6e-58 228.4 146 78.8
Sed0007731 Sechium edule HOM05D006027 ORTHO05D007604 4.6e-58 228.0 144 76.4
Cfa002488 Carpinus fangiana HOM05D006027 ORTHO05D007604 6.1e-58 227.6 149 78.5
Thecc.01G249800 Theobroma cacao HOM05D006027 ORTHO05D007604 7.9e-58 227.3 146 79.5
TAR633G0397 Trochodendron aralioides HOM05D006027 ORTHO05D007604 1.0e-57 226.9 147 76.9
Psat6g062520 Pisum sativum HOM05D006027 ORTHO05D007604 1.4e-57 226.5 144 79.9
Atru.chr5.1865 Acer truncatum HOM05D006027 ORTHO05D007604 1.8e-57 226.1 145 77.9
Haze_24710 Corylus avellana HOM05D006027 ORTHO05D007604 2.3e-57 225.7 149 77.9
Duzib211G0648 Durio zibethinus HOM05D006027 ORTHO05D007604 2.3e-57 225.7 146 78.1
Phvul.001G165200 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 2.3e-57 225.7 145 77.2
Aqoxy5G00130 Aquilegia oxysepala HOM05D006027 ORTHO05D007604 3.0e-57 225.3 145 75.9
Lsat_1_v5_gn_5_181161 Lactuca sativa HOM05D006027 ORTHO05D007604 3.9e-57 224.9 147 75.5
Nn3g19801 Nelumbo nucifera HOM05D006027 ORTHO05D007604 3.9e-57 224.9 147 76.2
Prupe.8G215000 Prunus persica HOM05D006027 ORTHO05D007604 5.1e-57 224.6 146 76.7
Duzib138G0534 Durio zibethinus HOM05D006027 ORTHO05D007604 8.8e-57 223.8 145 77.9
Actinidia09513 Actinidia chinensis HOM05D006027 ORTHO05D007604 1.1e-56 223.4 146 76.0
FAN27G2528 Fragaria x ananassa HOM05D006027 ORTHO05D007604 1.1e-56 223.4 145 77.2
MBI07_g08912_MAGBIO Magnolia biondii HOM05D006027 ORTHO05D007604 1.1e-56 223.4 147 74.8
MD10G1176000 Malus domestica HOM05D006027 ORTHO05D007604 1.1e-56 223.4 145 77.2
ClCG06G001400 Citrullus lanatus HOM05D006027 ORTHO05D007604 1.9e-56 222.6 149 73.2
ECA248G3782 Erigeron canadensis HOM05D006027 ORTHO05D007604 1.9e-56 222.6 146 73.3
Rhsim01G0260300 Rhododendron simsii HOM05D006027 ORTHO05D007604 1.9e-56 222.6 147 76.2
VMungo1383G1953 Vigna mungo HOM05D006027 ORTHO05D007604 2.5e-56 222.2 145 75.9
MD05G1188500 Malus domestica HOM05D006027 ORTHO05D007604 3.3e-56 221.9 145 75.9
Manes.12G038000 Manihot esculenta HOM05D006027 ORTHO05D007604 3.3e-56 221.9 146 76.0
Manes.13G039500 Manihot esculenta HOM05D006027 ORTHO05D007604 4.3e-56 221.5 146 76.0
SalBow4G0311 Salvia bowleyana HOM05D006027 ORTHO05D007604 5.7e-56 221.1 116 92.2
vmacro14793 Vaccinium macrocarpon HOM05D006027 ORTHO05D007604 5.7e-56 221.1 148 75.7
PGR044G2038 Punica granatum HOM05D006027 ORTHO05D007604 7.4e-56 220.7 145 75.9
CDE02G4364 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 9.7e-56 220.3 146 75.3
FvH4_2g20470 Fragaria vesca HOM05D006027 ORTHO05D007604 2.2e-55 219.2 145 76.6
FAN24G3422 Fragaria x ananassa HOM05D006027 ORTHO05D007604 2.2e-55 219.2 145 76.6
COL.COLO4_10205 Corchorus olitorius HOM05D006027 ORTHO05D007604 2.8e-55 218.8 114 91.2
Peaxi162Scf00043g00255 Petunia axillaris HOM05D006027 ORTHO05D007604 3.7e-55 218.4 116 89.7
PSO764G0320 Papaver somniferum HOM05D006027 ORTHO05D007604 4.8e-55 218.0 145 73.1
EL10Ac7g17691 Beta vulgaris HOM05D006027 ORTHO05D007604 1.1e-54 216.9 147 72.1
TWI18G0031 Tripterygium wilfordii HOM05D006027 ORTHO05D007604 1.4e-54 216.5 145 73.1
AUR62025437 Chenopodium quinoa HOM05D006027 ORTHO05D007604 4.1e-54 214.9 147 72.8
C01p10860 Brassica napus HOM05D006027 ORTHO05D007604 6.9e-54 214.2 146 69.2
Os01g0938100 Oryza sativa ssp. japonica HOM05D006027 ORTHO05D007604 6.9e-54 214.2 147 72.1
PSO832G0858 Papaver somniferum HOM05D006027 ORTHO05D007604 1.2e-53 213.4 145 71.7
BraA01t00872Z Brassica rapa HOM05D006027 ORTHO05D007604 2.6e-53 212.2 146 69.2
Zm00001eb141870 Zea mays HOM05D006027 ORTHO05D007604 4.5e-53 211.5 149 69.8
CARHR236440 Cardamine hirsuta HOM05D006027 ORTHO05D007604 5.9e-53 211.1 146 69.9
Aa31LG2G21720 Aethionema arabicum HOM05D006027 ORTHO05D007604 7.7e-53 210.7 146 70.5
Sp7g26630 Schrenkiella parvula HOM05D006027 ORTHO05D007604 7.7e-53 210.7 146 69.2
A01p09280 Brassica napus HOM05D006027 ORTHO05D007604 1.0e-52 210.3 146 68.5
Zm00001eb141830 Zea mays HOM05D006027 ORTHO05D007604 2.2e-52 209.1 132 75.8
Cpa.g.sc87.33 Carica papaya HOM05D006027 ORTHO05D007604 2.9e-52 208.8 115 85.2
BcaC06g32609 Brassica carinata HOM05D006027 ORTHO05D007604 3.8e-52 208.4 146 68.5
BcaNung04696 Brassica carinata HOM05D006027 ORTHO05D007604 3.8e-52 208.4 146 67.8
AUR62008802 Chenopodium quinoa HOM05D006027 ORTHO05D007604 3.8e-52 208.4 117 82.9
Thhalv10026347m.g Eutrema salsugineum HOM05D006027 ORTHO05D007604 3.8e-52 208.4 148 68.9
unitig_8.g3074 Utricularia gibba HOM05D006027 ORTHO05D007604 5.0e-52 208.0 141 71.6
AT4G28660 Arabidopsis thaliana HOM05D006027 ORTHO05D007604 1.1e-51 206.8 145 68.3
A03p58340 Brassica napus HOM05D006027 ORTHO05D007604 1.4e-51 206.5 147 68.7
Carub.0007s1200 Capsella rubella HOM05D006027 ORTHO05D007604 2.5e-51 205.7 148 67.6
THA.LOC104814531 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 3.2e-51 205.3 150 66.7
C07p56360 Brassica napus HOM05D006027 ORTHO05D007604 4.2e-51 204.9 147 68.0
BolC7t46115H Brassica oleracea HOM05D006027 ORTHO05D007604 4.2e-51 204.9 147 68.0
Hund18287 Selenicereus undatus HOM05D006027 ORTHO05D007604 5.5e-51 204.5 145 69.7
THA.LOC104820068 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 9.4e-51 203.8 147 70.1
HPP92_027289 Vanilla planifolia HOM05D006027 ORTHO05D007604 9.4e-51 203.8 145 66.9
AL7G23880 Arabidopsis lyrata HOM05D006027 ORTHO05D007604 2.7e-50 202.2 147 67.3
BolC1t01050H Brassica oleracea HOM05D000022 ORTHO05D000744 1.4e-49 199.9 139 69.1
ATR0787G157 Amborella trichopoda HOM05D006027 ORTHO05D007604 1.1e-48 196.8 115 80.9
Sc05g0002880 Simmondsia chinensis HOM05D006027 ORTHO05D007604 2.0e-48 196.1 136 72.8
HPP92_008468 Vanilla planifolia HOM05D006027 ORTHO05D007604 2.6e-48 195.7 145 66.2
Ciclev10022322m.g Citrus clementina HOM05D006027 ORTHO05D007604 3.3e-48 195.3 133 70.7
Mapoly0042s0085 Marchantia polymorpha HOM05D006027 ORTHO05D007604 1.7e-44 183.0 147 63.9
SMO347G0509 Selaginella moellendorffii HOM05D006027 ORTHO05D007604 6.1e-42 174.5 115 71.3
Pp3c7_5450 Physcomitrium patens HOM05D006027 ORTHO05D007604 8.0e-42 174.1 116 68.1
AagrBONN_evm.TU.Sc2ySwM_340.224 Anthoceros agrestis HOM05D006027 ORTHO05D007604 3.0e-41 172.2 109 71.6
Pp3c11_18280 Physcomitrium patens HOM05D006027 ORTHO05D007604 3.3e-40 168.7 119 63.0
CiPaw.03G271300 Carya illinoinensis HOM05D006027 ORTHO05D007604 5.0e-36 154.8 145 62.1
Ah.15g092630 Amaranthus hybridus HOM05D006027 ORTHO05D007604 6.5e-36 154.5 110 70.0
CBR_g12742 Chara braunii HOM05D006027 ORTHO05D007604 5.5e-35 151.4 110 60.9
MCO16G336 Micromonas commoda HOM05D006027 ORTHO05D007604 1.6e-34 149.8 110 59.1
Cre10.g440450 Chlamydomonas reinhardtii HOM05D006027 ORTHO05D007604 4.0e-33 145.2 109 59.6
PRCOL_00005949 Prasinoderma coloniale HOM05D006027 ORTHO05D007604 6.7e-33 144.4 106 59.4
CSS0017427 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 1.0e-25 120.6 136 52.2
Zm00001eb141750 Zea mays HOM05D006027 ORTHO05D007604 1.6e-21 106.7 59 81.4
Zm00001eb141790 Zea mays HOM05D006027 ORTHO05D007604 1.6e-21 106.7 59 81.4
TAR362G0025 Trochodendron aralioides HOM05D006027 ORTHO05D007604 1.1e-19 100.5 62 79.0
Zm00001eb141760 Zea mays HOM05D006027 ORTHO05D007604 5.7e-16 88.2 52 76.9
CDE09G0356 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 2.4e-14 82.8 71 62.0
RcHm_v2.0_Chr6g0286561 Rosa chinensis HOM05D006027 ORTHO05D007604 1.3e-12 77.0 69 63.8


User provided reference genes

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