Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052048.1 Olea europaea HOM05D005867 ORTHO05D007273 5.0e-105 384.4 188 100.0
Oeu035742.1 Olea europaea HOM05D005867 ORTHO05D007273 3.6e-95 351.7 188 91.5
MSTRG.21396 Avicennia marina HOM05D005867 ORTHO05D007273 5.3e-91 337.8 183 86.9
Nitab4.5_0001925g0100 Nicotiana tabacum HOM05D005867 ORTHO05D007273 5.3e-91 337.8 180 89.4
DCAR_002056 Daucus carota HOM05D005867 ORTHO05D007273 6.9e-91 337.4 183 88.5
Cc01_g01980 Coffea canephora HOM05D005867 ORTHO05D007273 1.5e-90 336.3 183 87.4
Nitab4.5_0008647g0010 Nicotiana tabacum HOM05D005867 ORTHO05D007273 3.4e-90 335.1 180 88.3
Actinidia16309 Actinidia chinensis HOM05D005867 ORTHO05D007273 4.5e-90 334.7 185 84.3
Lsat_1_v5_gn_2_100781 Lactuca sativa HOM05D005867 ORTHO05D007273 7.7e-90 334.0 180 87.2
Peaxi162Scf00029g00326 Petunia axillaris HOM05D005867 ORTHO05D007273 2.9e-89 332.0 186 84.9
HanXRQChr14g0453051 Helianthus annuus HOM05D005867 ORTHO05D007273 5.0e-89 331.3 180 85.6
MSTRG.17581 Avicennia marina HOM05D005867 ORTHO05D007273 6.5e-89 330.9 183 87.4
Nitab4.5_0002766g0030 Nicotiana tabacum HOM05D005867 ORTHO05D007273 8.5e-89 330.5 183 85.2
MD11G1028900 Malus domestica HOM05D005867 ORTHO05D007273 1.9e-88 329.3 183 83.6
PGSC0003DMG400023838 Solanum tuberosum HOM05D005867 ORTHO05D007273 1.9e-88 329.3 183 85.8
CAN.G575.64 Capsicum annuum HOM05D005867 ORTHO05D007273 2.5e-88 328.9 183 85.2
Sopen12g034670 Solanum pennellii HOM05D005867 ORTHO05D007273 2.5e-88 328.9 183 85.8
SGA_v2.0_scaffold8G04610 Striga asiatica HOM05D005867 ORTHO05D007273 2.5e-88 328.9 183 83.6
Gohir.A05G068300 Gossypium hirsutum HOM05D005867 ORTHO05D007273 3.2e-88 328.6 185 83.8
MD03G1024000 Malus domestica HOM05D005867 ORTHO05D007273 4.2e-88 328.2 183 83.1
Rhsim13G0224100 Rhododendron simsii HOM05D005867 ORTHO05D007273 4.2e-88 328.2 185 83.2
Gorai.009G072300 Gossypium raimondii HOM05D005867 ORTHO05D007273 5.5e-88 327.8 185 83.2
Nitab4.5_0008868g0020 Nicotiana tabacum HOM05D005867 ORTHO05D007273 7.2e-88 327.4 183 85.2
Solyc12g100050.2 Solanum lycopersicum HOM05D005867 ORTHO05D007273 7.2e-88 327.4 183 85.2
Cpa.g.sc84.80 Carica papaya HOM05D005867 ORTHO05D007273 9.4e-88 327.0 185 82.2
Potri.001G018500 Populus trichocarpa HOM05D005867 ORTHO05D007273 9.4e-88 327.0 183 82.0
PGSC0003DMG400013588 Solanum tuberosum HOM05D005867 ORTHO05D007273 9.4e-88 327.0 183 84.7
CANSAT54G1708 Cannabis sativa HOM05D005867 ORTHO05D007273 1.6e-87 326.2 185 83.8
Ah.06g193630 Amaranthus hybridus HOM05D005867 ORTHO05D007273 2.1e-87 325.9 183 82.0
HanXRQChr02g0036871 Helianthus annuus HOM05D005867 ORTHO05D007273 2.1e-87 325.9 180 84.4
Sabra01G0013100 Salix brachista HOM05D005867 ORTHO05D007273 2.1e-87 325.9 183 81.4
SalBow4G1382 Salvia bowleyana HOM05D005867 ORTHO05D007273 3.6e-87 325.1 183 84.2
ClCG03G013300 Citrullus lanatus HOM05D005867 ORTHO05D007273 4.7e-87 324.7 182 84.6
Gohir.D05G071300 Gossypium hirsutum HOM05D005867 ORTHO05D007273 4.7e-87 324.7 180 85.0
Solyc11g061760.3 Solanum lycopersicum HOM05D005867 ORTHO05D007273 4.7e-87 324.7 182 84.1
Sopen11g023660 Solanum pennellii HOM05D005867 ORTHO05D007273 4.7e-87 324.7 182 84.1
Ah.04g161870 Amaranthus hybridus HOM05D005867 ORTHO05D007273 6.1e-87 324.3 183 81.4
Cfa009733 Carpinus fangiana HOM05D005867 ORTHO05D007273 6.1e-87 324.3 185 82.2
Dinv36283 Davidia involucrata HOM05D005867 ORTHO05D007273 6.1e-87 324.3 185 82.7
Migut.D00576 Erythranthe guttata HOM05D005867 ORTHO05D007273 6.1e-87 324.3 182 84.1
Prupe.6G023200 Prunus persica HOM05D005867 ORTHO05D007273 7.9e-87 323.9 183 82.0
QL01p005337 Quercus lobata HOM05D005867 ORTHO05D007273 7.9e-87 323.9 185 82.2
Ciclev10016610m.g Citrus clementina HOM05D005867 ORTHO05D007273 1.0e-86 323.6 185 81.1
SalBow4G0034 Salvia bowleyana HOM05D005867 ORTHO05D007273 1.0e-86 323.6 183 83.6
Thecc.09G227900 Theobroma cacao HOM05D005867 ORTHO05D007273 1.0e-86 323.6 185 81.1
MELO3C015200.2 Cucumis melo HOM05D005867 ORTHO05D007273 1.8e-86 322.8 182 84.6
ECA238G1591 Erigeron canadensis HOM05D005867 ORTHO05D007273 1.8e-86 322.8 180 83.3
COL.COLO4_24845 Corchorus olitorius HOM05D005867 ORTHO05D007273 2.3e-86 322.4 185 80.5
Duzib168G0296 Durio zibethinus HOM05D005867 ORTHO05D007273 3.0e-86 322.0 185 81.1
EL10Ac4g10299 Beta vulgaris HOM05D005867 ORTHO05D007273 3.9e-86 321.6 183 81.4
AUR62000096 Chenopodium quinoa HOM05D005867 ORTHO05D007273 6.7e-86 320.9 183 79.8
AUR62019269 Chenopodium quinoa HOM05D005867 ORTHO05D007273 6.7e-86 320.9 183 79.8
Eucgr.J00791 Eucalyptus grandis HOM05D005867 ORTHO05D007273 6.7e-86 320.9 183 82.0
FvH4_3g43090 Fragaria vesca HOM05D005867 ORTHO05D007273 8.8e-86 320.5 183 79.8
FAN11G1123 Fragaria x ananassa HOM05D005867 ORTHO05D007273 8.8e-86 320.5 183 79.8
FAN25G0812 Fragaria x ananassa HOM05D005867 ORTHO05D007273 8.8e-86 320.5 183 79.8
CsaV3_1G042730 Cucumis sativus L. HOM05D005867 ORTHO05D007273 1.1e-85 320.1 182 83.5
Migut.N02304 Erythranthe guttata HOM05D005867 ORTHO05D007273 1.1e-85 320.1 185 82.7
RcHm_v2.0_Chr5g0077191 Rosa chinensis HOM05D005867 ORTHO05D007273 1.5e-85 319.7 183 80.9
VMungo1080G0295 Vigna mungo HOM05D005867 ORTHO05D007273 2.0e-85 319.3 185 80.5
Manes.06G166900 Manihot esculenta HOM05D005867 ORTHO05D007273 2.6e-85 318.9 185 81.1
SHI29727 Sapria himalayana HOM05D005867 ORTHO05D007273 2.6e-85 318.9 183 80.3
CSS0048722 Camellia sinensis var. sinensis HOM05D005867 ORTHO05D007273 3.3e-85 318.5 182 81.9
PGR119G1510 Punica granatum HOM05D005867 ORTHO05D007273 3.3e-85 318.5 183 80.9
Atru.chr3.2589 Acer truncatum HOM05D005867 ORTHO05D007273 4.4e-85 318.2 185 79.5
TAR636G0304 Trochodendron aralioides HOM05D005867 ORTHO05D007273 4.4e-85 318.2 185 80.0
CiPaw.13G163600 Carya illinoinensis HOM05D005867 ORTHO05D007273 1.3e-84 316.6 185 82.2
Sed0004394 Sechium edule HOM05D005867 ORTHO05D007273 1.7e-84 316.2 183 80.3
TAR633G2552 Trochodendron aralioides HOM05D005867 ORTHO05D007273 1.7e-84 316.2 186 78.5
GSVIVG01025306001 Vitis vinifera HOM05D005867 ORTHO05D007273 1.7e-84 316.2 183 79.8
FAN21G2433 Fragaria x ananassa HOM05D005867 ORTHO05D007273 2.2e-84 315.8 183 78.1
Glyma.15G033100 Glycine max HOM05D005867 ORTHO05D007273 2.8e-84 315.5 185 80.0
Sc06g0004490 Simmondsia chinensis HOM05D005867 ORTHO05D007273 2.8e-84 315.5 185 81.6
FAN16G1279 Fragaria x ananassa HOM05D005867 ORTHO05D007273 4.8e-84 314.7 183 79.2
Dinv08036 Davidia involucrata HOM05D005867 ORTHO05D007273 6.3e-84 314.3 178 82.6
Phvul.L010243 Phaseolus vulgaris HOM05D005867 ORTHO05D007273 6.3e-84 314.3 185 79.5
TWI60G1455 Tripterygium wilfordii HOM05D005867 ORTHO05D007273 1.8e-83 312.8 185 78.4
THA.LOC104804975 Tarenaya hassleriana HOM05D005867 ORTHO05D007273 2.4e-83 312.4 186 77.4
Haze_23087 Corylus avellana HOM05D005867 ORTHO05D007273 9.1e-83 310.5 183 80.3
Nn2g15416 Nelumbo nucifera HOM05D005867 ORTHO05D007273 2.0e-82 309.3 183 79.8
unitig_21.g20645 Utricularia gibba HOM05D005867 ORTHO05D007273 4.5e-82 308.1 183 77.0
Aa31LG3G14590 Aethionema arabicum HOM05D005867 ORTHO05D007273 1.3e-81 306.6 183 77.6
Thhalv10014788m.g Eutrema salsugineum HOM05D005867 ORTHO05D007273 5.0e-81 304.7 180 77.8
Carub.0006s1124 Capsella rubella HOM05D005867 ORTHO05D007273 6.5e-81 304.3 180 77.8
Sp6g30910 Schrenkiella parvula HOM05D005867 ORTHO05D007273 8.5e-81 303.9 180 77.2
AT5G13070 Arabidopsis thaliana HOM05D005867 ORTHO05D007273 1.5e-80 303.1 180 77.2
BraA10t44575Z Brassica rapa HOM05D005867 ORTHO05D007273 1.5e-80 303.1 180 77.2
AL6G23670 Arabidopsis lyrata HOM05D005867 ORTHO05D007273 1.9e-80 302.8 180 77.2
BcaC04g19155 Brassica carinata HOM05D002203 ORTHO05D007273 1.9e-80 302.8 180 76.7
A10p25130 Brassica napus HOM05D005867 ORTHO05D007273 3.2e-80 302.0 180 76.7
C09p64030 Brassica napus HOM05D005867 ORTHO05D007273 3.2e-80 302.0 180 76.7
BolC9t59241H Brassica oleracea HOM05D005867 ORTHO05D007273 3.2e-80 302.0 180 76.7
CARHR200400 Cardamine hirsuta HOM05D005867 ORTHO05D007273 5.5e-80 301.2 180 77.2
A02p01670 Brassica napus HOM05D005867 ORTHO05D007273 7.2e-80 300.8 180 76.1
BolC2t06533H Brassica oleracea HOM05D005867 ORTHO05D007273 7.2e-80 300.8 180 76.1
BraA02t05146Z Brassica rapa HOM05D005867 ORTHO05D007273 7.2e-80 300.8 180 76.1
TWI34G0922 Tripterygium wilfordii HOM05D005867 ORTHO05D007273 1.2e-79 300.1 172 79.7
BcaNung01858 Brassica carinata HOM05D005867 ORTHO05D007273 1.6e-79 299.7 180 75.6
C02p05880 Brassica napus HOM05D005867 ORTHO05D007273 2.1e-79 299.3 180 75.6
BcaNung01174 Brassica carinata HOM05D005867 ORTHO05D007273 4.7e-79 298.1 180 75.6
Aqoxy1G00241 Aquilegia oxysepala HOM05D005867 ORTHO05D007273 1.8e-78 296.2 178 77.0
Lj3g0003495 Lotus japonicus HOM05D005867 ORTHO05D007273 4.0e-78 295.0 185 76.2
arahy.Tifrunner.gnm1.ann1.2D2P15 Arachis hypogaea HOM05D005867 ORTHO05D007273 5.2e-78 294.7 185 75.1
Lalb_Chr14g0372181 Lupinus albus HOM05D005867 ORTHO05D007273 5.2e-78 294.7 185 75.1
arahy.Tifrunner.gnm1.ann1.V9D8IR Arachis hypogaea HOM05D005867 ORTHO05D007273 1.2e-77 293.5 185 74.6
Duzib150G0087 Durio zibethinus HOM05D005867 ORTHO05D007273 7.5e-77 290.8 181 77.3
TPR.G6870 Trifolium pratense HOM05D005867 ORTHO05D007273 9.7e-77 290.4 185 74.1
Ca_01285_v3 Cicer arietinum L. HOM05D005867 ORTHO05D007273 6.3e-76 287.7 185 73.5
Cfa009734 Carpinus fangiana HOM05D005867 ORTHO05D007273 2.4e-75 285.8 188 71.3
Medtr1g058050 Medicago truncatula HOM05D005867 ORTHO05D007273 2.4e-75 285.8 185 73.0
Medtr2g017985 Medicago truncatula HOM05D005867 ORTHO05D007273 2.4e-75 285.8 185 71.9
PSO339G4569 Papaver somniferum HOM05D005867 ORTHO05D007273 7.0e-75 284.3 186 72.0
Medtr8g096810 Medicago truncatula HOM05D005867 ORTHO05D007273 1.6e-74 283.1 185 71.9
Medtr2g098170 Medicago truncatula HOM05D005867 ORTHO05D007273 2.7e-74 282.3 185 71.9
PSO384G4422 Papaver somniferum HOM05D005867 ORTHO05D007273 2.7e-74 282.3 186 71.5
Psat5g287440 Pisum sativum HOM05D005867 ORTHO05D007273 7.7e-74 280.8 180 73.9
QL01p005297 Quercus lobata HOM05D005867 ORTHO05D007273 1.9e-72 276.2 187 66.8
MBI17_g30524_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 5.5e-72 274.6 173 72.3
CiPaw.13G163500 Carya illinoinensis HOM05D005867 ORTHO05D007273 2.0e-69 266.2 180 67.2
ATR0605G298 Amborella trichopoda HOM05D005867 ORTHO05D007273 4.2e-64 248.4 183 63.4
Mapoly0061s0125 Marchantia polymorpha HOM05D005867 ORTHO05D007273 1.7e-60 236.5 180 55.6
SMO147G0033 Selaginella moellendorffii HOM05D005867 ORTHO05D007273 1.5e-56 223.4 180 54.4
Os02g0717900 Oryza sativa ssp. japonica HOM05D005867 ORTHO05D007273 1.0e-54 217.2 187 53.5
Pp3c1_37310 Physcomitrium patens HOM05D005867 ORTHO05D007273 4.0e-54 215.3 183 52.5
MBI01_g27622_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 9.8e-53 210.7 172 60.5
Pp3c14_26010 Physcomitrium patens HOM05D005867 ORTHO05D007273 9.8e-53 210.7 177 52.5
CBR_g20418 Chara braunii HOM05D005867 ORTHO05D007273 5.6e-48 194.9 175 50.3
Os09g0486000 Oryza sativa ssp. japonica HOM05D005867 ORTHO05D007273 1.4e-43 180.3 185 48.1
HPP92_022794 Vanilla planifolia HOM05D005867 ORTHO05D007273 6.0e-42 174.9 168 48.8
Lj2P647T17 Lonicera japonica HOM05D005867 ORTHO05D007273 1.2e-39 167.2 90 88.9
Zm00001eb316590 Zea mays HOM05D005867 ORTHO05D007273 4.3e-32 142.1 172 44.8
Zm00001eb189280 Zea mays HOM05D005867 ORTHO05D007273 8.6e-25 117.9 88 60.2
Mapoly0008s0230 Marchantia polymorpha HOM05D005867 ORTHO05D254737 4.4e-21 105.5 154 35.1
Actinidia28459 Actinidia chinensis HOM05D005867 ORTHO05D055216 1.9e-19 100.1 54 83.3
Cfa022043 Carpinus fangiana HOM05D002321 ORTHO05D006940 4.8e-07 58.9 88 34.1


User provided reference genes

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