Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052043.2 Olea europaea HOM05D003718 ORTHO05D004402 0.0e+00 1557.0 808 100.0
Migut.D00439 Erythranthe guttata HOM05D003718 ORTHO05D004402 5.5e-294 1014.2 808 67.5
MSTRG.21485 Avicennia marina HOM05D003718 ORTHO05D004402 4.5e-288 994.6 808 66.1
SalBow4G0483 Salvia bowleyana HOM05D003718 ORTHO05D004402 3.9e-284 981.5 815 66.0
Dinv34637 Davidia involucrata HOM05D003718 ORTHO05D004402 4.1e-281 971.5 809 64.9
Cc01_g18200 Coffea canephora HOM05D003718 ORTHO05D004402 4.2e-278 961.4 796 64.3
SGA_v2.0_scaffold138G35211 Striga asiatica HOM05D003718 ORTHO05D004402 2.8e-274 948.7 886 60.2
QL09p039591 Quercus lobata HOM05D003718 ORTHO05D004402 9.4e-270 933.7 808 62.7
Sopen07g005600 Solanum pennellii HOM05D003718 ORTHO05D004402 4.7e-269 931.4 800 63.2
CSS0049010 Camellia sinensis var. sinensis HOM05D003718 ORTHO05D004402 6.1e-269 931.0 809 63.9
CiPaw.03G266000 Carya illinoinensis HOM05D003718 ORTHO05D004402 1.8e-268 929.5 809 62.1
Hma1.2p1_0273F.1_g109540 Hydrangea macrophylla HOM05D003718 ORTHO05D004402 3.0e-268 928.7 810 63.7
Actinidia07305 Actinidia chinensis HOM05D003718 ORTHO05D004402 6.8e-268 927.5 809 64.0
CSS0040480 Camellia sinensis var. sinensis HOM05D003718 ORTHO05D004402 1.5e-267 926.4 809 63.7
Sopen05g027610 Solanum pennellii HOM05D003718 ORTHO05D004402 2.0e-267 926.0 800 62.8
Solyc05g046330.4 Solanum lycopersicum HOM05D003718 ORTHO05D004402 1.3e-266 923.3 800 62.5
Cfa013046 Carpinus fangiana HOM05D003718 ORTHO05D004402 4.1e-265 918.3 797 62.0
Peaxi162Scf00320g00717 Petunia axillaris HOM05D003718 ORTHO05D004402 2.7e-264 915.6 800 62.2
SGA_v2.0_scaffold1G00624 Striga asiatica HOM05D003718 ORTHO05D004402 1.3e-263 913.3 809 62.3
CiPaw.04G187700 Carya illinoinensis HOM05D003718 ORTHO05D004402 1.9e-262 909.4 809 61.3
CAN.G54.7 Capsicum annuum HOM05D003718 ORTHO05D004402 1.2e-261 906.7 808 61.3
CAN.G106.18 Capsicum annuum HOM05D003718 ORTHO05D004402 1.2e-259 900.2 796 61.8
vmacro14814 Vaccinium macrocarpon HOM05D003718 ORTHO05D004402 2.2e-258 896.0 758 64.4
Thecc.01G255900 Theobroma cacao HOM05D003718 ORTHO05D004402 4.1e-257 891.7 791 59.0
Gohir.D07G156100 Gossypium hirsutum HOM05D003718 ORTHO05D004402 3.5e-256 888.6 797 58.6
Atru.chr5.1725 Acer truncatum HOM05D003718 ORTHO05D004402 5.9e-256 887.9 797 59.6
Gorai.001G179000 Gossypium raimondii HOM05D003718 ORTHO05D004402 5.9e-256 887.9 797 58.5
CsaV3_1G015830 Cucumis sativus L. HOM05D003718 ORTHO05D004402 1.0e-255 887.1 809 58.3
Duzib211G0290 Durio zibethinus HOM05D003718 ORTHO05D004402 1.0e-255 887.1 797 57.8
Manes.12G033700 Manihot esculenta HOM05D003718 ORTHO05D004402 1.0e-255 887.1 811 60.4
Solyc07g014700.4 Solanum lycopersicum HOM05D003718 ORTHO05D004402 2.3e-255 885.9 758 63.2
Duzib133G1085 Durio zibethinus HOM05D003718 ORTHO05D004402 1.9e-254 882.9 797 58.8
CANSAT01G0671 Cannabis sativa HOM05D003718 ORTHO05D004402 4.2e-254 881.7 797 60.1
TWI75G1389 Tripterygium wilfordii HOM05D003718 ORTHO05D004402 3.6e-253 878.6 810 59.4
Ciclev10019124m.g Citrus clementina HOM05D003718 ORTHO05D004402 1.0e-252 877.1 800 59.0
MELO3C025537.2 Cucumis melo HOM05D003718 ORTHO05D004402 1.0e-252 877.1 809 57.6
Gohir.A07G149800 Gossypium hirsutum HOM05D003718 ORTHO05D004402 1.4e-252 876.7 797 58.1
TWI12G1081 Tripterygium wilfordii HOM05D003718 ORTHO05D004402 1.5e-251 873.2 812 59.0
GSVIVG01028357001 Vitis vinifera HOM05D003718 ORTHO05D004402 1.5e-251 873.2 810 59.9
Prupe.8G221600 Prunus persica HOM05D003718 ORTHO05D004402 7.5e-251 870.9 797 59.0
Nitab4.5_0001572g0020 Nicotiana tabacum HOM05D003718 ORTHO05D004402 9.8e-251 870.5 800 59.6
Eucgr.K03255 Eucalyptus grandis HOM05D003718 ORTHO05D004402 1.1e-249 867.1 807 58.7
Potri.002G036600 Populus trichocarpa HOM05D003718 ORTHO05D004402 5.4e-249 864.8 804 58.3
ECA236G3831 Erigeron canadensis HOM05D003718 ORTHO05D004402 7.0e-249 864.4 796 58.2
Duzib138G1036 Durio zibethinus HOM05D003718 ORTHO05D004402 2.0e-248 862.8 797 57.6
Potri.005G226100 Populus trichocarpa HOM05D003718 ORTHO05D004402 3.9e-247 858.6 810 58.1
TAR362G0778 Trochodendron aralioides HOM05D003718 ORTHO05D004402 6.6e-247 857.8 809 58.8
Manes.13G035300 Manihot esculenta HOM05D003718 ORTHO05D004402 8.6e-247 857.4 801 58.6
Nitab4.5_0000413g0180 Nicotiana tabacum HOM05D003718 ORTHO05D004402 1.1e-246 857.1 800 59.4
DCAR_000921 Daucus carota HOM05D003718 ORTHO05D004402 2.5e-246 855.9 808 58.3
TAR633G0796 Trochodendron aralioides HOM05D003718 ORTHO05D004402 2.5e-246 855.9 810 58.4
Gohir.D11G137575 Gossypium hirsutum HOM05D003718 ORTHO05D004402 3.3e-246 855.5 809 57.1
Gorai.007G147600 Gossypium raimondii HOM05D003718 ORTHO05D004402 4.3e-246 855.1 809 57.0
Glyma.03G164400 Glycine max HOM05D003718 ORTHO05D004402 1.2e-245 853.6 808 58.0
Sed0001928 Sechium edule HOM05D003718 ORTHO05D004402 1.2e-245 853.6 791 57.5
Gohir.A11G131600 Gossypium hirsutum HOM05D003718 ORTHO05D004402 1.8e-244 849.7 809 57.2
Lsat_1_v5_gn_8_92540 Lactuca sativa HOM05D003718 ORTHO05D004402 1.8e-244 849.7 791 58.0
Sabra05G0174600 Salix brachista HOM05D003718 ORTHO05D004402 3.1e-244 849.0 832 56.9
MD05G1194900 Malus domestica HOM05D003718 ORTHO05D004402 8.9e-244 847.4 803 57.5
HanXRQChr04g0110491 Helianthus annuus HOM05D003718 ORTHO05D004402 4.4e-243 845.1 756 59.3
Nn1g02814 Nelumbo nucifera HOM05D003718 ORTHO05D004402 7.5e-243 844.3 811 57.0
Sabra02G0029600 Salix brachista HOM05D003718 ORTHO05D004402 2.9e-242 842.4 843 55.8
FvH4_2g21250 Fragaria vesca HOM05D003718 ORTHO05D004402 2.4e-241 839.3 799 59.1
Glyma.19G165800 Glycine max HOM05D003718 ORTHO05D004402 4.1e-241 838.6 810 58.0
MD10G1181500 Malus domestica HOM05D003718 ORTHO05D004402 1.2e-240 837.0 804 57.3
Lalb_Chr02g0152551 Lupinus albus HOM05D003718 ORTHO05D004402 2.7e-240 835.9 809 57.8
RcHm_v2.0_Chr6g0287811 Rosa chinensis HOM05D003718 ORTHO05D004402 7.8e-240 834.3 799 58.6
Aqoxy1G01842 Aquilegia oxysepala HOM05D003718 ORTHO05D004402 1.7e-239 833.2 812 55.8
Phvul.001G162000 Phaseolus vulgaris HOM05D003718 ORTHO05D004402 3.0e-239 832.4 804 57.5
FAN27G0576 Fragaria x ananassa HOM05D003718 ORTHO05D004402 5.0e-239 831.6 824 57.3
VMungo1383G2169 Vigna mungo HOM05D003718 ORTHO05D004402 3.6e-237 825.5 809 56.6
Lj5g0026512 Lotus japonicus HOM05D003718 ORTHO05D004402 6.2e-237 824.7 810 56.8
PGR031G0689 Punica granatum HOM05D003718 ORTHO05D004402 8.1e-237 824.3 790 57.2
FAN24G2691 Fragaria x ananassa HOM05D003718 ORTHO05D004402 1.8e-236 823.2 820 57.3
THA.LOC104806254 Tarenaya hassleriana HOM05D003718 ORTHO05D004402 2.3e-236 822.8 804 55.1
FAN15G3248 Fragaria x ananassa HOM05D003718 ORTHO05D004402 4.0e-236 822.0 820 56.3
Lalb_Chr21g0313961 Lupinus albus HOM05D003718 ORTHO05D004402 5.2e-236 821.6 803 56.7
Ca_09672_v3 Cicer arietinum L. HOM05D003718 ORTHO05D004402 7.5e-235 817.8 783 56.6
Rhsim01G0262400 Rhododendron simsii HOM05D003718 ORTHO05D004402 1.3e-234 817.0 720 62.1
THA.LOC104812416 Tarenaya hassleriana HOM05D003718 ORTHO05D004402 1.7e-234 816.6 802 55.4
Nn3g19693 Nelumbo nucifera HOM05D003718 ORTHO05D004402 4.9e-234 815.1 811 56.1
arahy.Tifrunner.gnm1.ann1.FU7SP6 Arachis hypogaea HOM05D003718 ORTHO05D004402 4.1e-233 812.0 810 55.2
arahy.Tifrunner.gnm1.ann1.QXN52H Arachis hypogaea HOM05D003718 ORTHO05D004402 6.0e-232 808.1 810 55.1
AUR62013766 Chenopodium quinoa HOM05D003718 ORTHO05D004402 3.9e-231 805.4 803 55.0
Medtr1g069780 Medicago truncatula HOM05D003718 ORTHO05D004402 3.9e-231 805.4 786 56.2
Psat6g054080 Pisum sativum HOM05D003718 ORTHO05D004402 1.1e-230 803.9 799 55.2
CARHR227730 Cardamine hirsuta HOM05D003718 ORTHO05D004402 4.3e-230 802.0 797 54.6
AL7G32970 Arabidopsis lyrata HOM05D003718 ORTHO05D004402 7.3e-230 801.2 797 55.0
Thhalv10024580m.g Eutrema salsugineum HOM05D003718 ORTHO05D004402 3.6e-229 798.9 797 54.7
Glyma.10G038000 Glycine max HOM05D003718 ORTHO05D004402 3.6e-229 798.9 775 56.8
Carub.0007s2028 Capsella rubella HOM05D003718 ORTHO05D004402 5.2e-228 795.0 809 54.4
Lj1C68G8 Lonicera japonica HOM05D003718 ORTHO05D004402 6.8e-228 794.7 737 59.3
Phvul.007G191800 Phaseolus vulgaris HOM05D003718 ORTHO05D004402 3.4e-227 792.3 780 56.0
unitig_22.g5287 Utricularia gibba HOM05D003718 ORTHO05D004402 3.4e-227 792.3 824 54.6
arahy.Tifrunner.gnm1.ann1.EWE7BX Arachis hypogaea HOM05D003718 ORTHO05D004402 7.6e-227 791.2 813 54.1
AT4G21150 Arabidopsis thaliana HOM05D003718 ORTHO05D004402 1.7e-226 790.0 797 54.2
arahy.Tifrunner.gnm1.ann1.B1YDGW Arachis hypogaea HOM05D003718 ORTHO05D004402 1.1e-225 787.3 790 54.6
Sp7g19230 Schrenkiella parvula HOM05D003718 ORTHO05D004402 9.2e-225 784.3 805 53.9
VMungo0720G0687 Vigna mungo HOM05D003718 ORTHO05D004402 1.6e-224 783.5 797 54.6
BolC1t01458H Brassica oleracea HOM05D003718 ORTHO05D004402 2.7e-224 782.7 804 54.0
TPR.G5874 Trifolium pratense HOM05D003718 ORTHO05D004402 2.7e-224 782.7 758 55.8
BcaC09g51252 Brassica carinata HOM05D003718 ORTHO05D004402 1.3e-223 780.4 804 53.9
ClCG03G002590 Citrullus lanatus HOM05D003718 ORTHO05D004402 6.6e-223 778.1 809 53.3
Lsat_1_v5_gn_5_182920 Lactuca sativa HOM05D003718 ORTHO05D004402 1.6e-221 773.5 810 54.2
BraA03t14340Z Brassica rapa HOM05D003718 ORTHO05D004402 2.4e-220 769.6 801 53.7
Peaxi162Scf00906g00225 Petunia axillaris HOM05D003718 ORTHO05D004402 2.4e-220 769.6 784 56.1
BcaNung03839 Brassica carinata HOM05D003718 ORTHO05D004402 8.4e-218 761.1 801 52.4
Rhsim13G0036100 Rhododendron simsii HOM05D003718 ORTHO05D004402 1.1e-217 760.8 730 58.5
PSO210G5136 Papaver somniferum HOM05D003718 ORTHO05D004402 1.0e-215 754.2 810 52.6
PSO832G2930 Papaver somniferum HOM05D003718 ORTHO05D004402 9.6e-214 747.7 810 52.3
EL10Ac1g00739 Beta vulgaris HOM05D003718 ORTHO05D004402 2.4e-212 743.0 823 50.8
CDE07G1087 Ceratophyllum demersum HOM05D003718 ORTHO05D004402 1.5e-211 740.3 809 51.1
Hund17111 Selenicereus undatus HOM05D003718 ORTHO05D004402 5.8e-211 738.4 762 52.4
Os01g0911200 Oryza sativa ssp. japonica HOM05D003718 ORTHO05D004402 7.6e-211 738.0 813 50.1
Psat3g056400 Pisum sativum HOM05D003718 ORTHO05D004402 1.7e-210 736.9 809 52.5
ATR0736G006 Amborella trichopoda HOM05D003718 ORTHO05D004402 6.4e-210 734.9 757 52.8
COL.COLO4_04023 Corchorus olitorius HOM05D003718 ORTHO05D004402 6.4e-210 734.9 734 54.5
TPR.G9204 Trifolium pratense HOM05D003718 ORTHO05D004402 1.1e-209 734.2 816 51.8
unitig_8.g3735 Utricularia gibba HOM05D003718 ORTHO05D004402 1.4e-209 733.8 763 53.6
BraA01t01195Z Brassica rapa HOM05D003718 ORTHO05D004402 2.4e-209 733.0 759 53.0
C01p15100 Brassica napus HOM05D003718 ORTHO05D004402 3.2e-209 732.6 765 52.5
A01p12510 Brassica napus HOM05D003718 ORTHO05D004402 4.2e-209 732.3 759 52.8
CDE04G2599 Ceratophyllum demersum HOM05D003718 ORTHO05D004402 7.1e-209 731.5 809 51.1
Aa31LG6G3160 Aethionema arabicum HOM05D003718 ORTHO05D004402 6.0e-208 728.4 768 52.7
Zm00001eb365020 Zea mays HOM05D003718 ORTHO05D004402 2.5e-206 723.0 798 50.1
A03p52670 Brassica napus HOM05D003718 ORTHO05D004402 4.3e-206 722.2 754 52.9
Zm00001eb143710 Zea mays HOM05D003718 ORTHO05D004402 1.3e-205 720.7 798 49.6
C07p51100 Brassica napus HOM05D003718 ORTHO05D004402 1.5e-203 713.8 754 52.3
BolC7t45610H Brassica oleracea HOM05D003718 ORTHO05D004402 1.5e-203 713.8 754 52.3
Sc02g0003190 Simmondsia chinensis HOM05D003718 ORTHO05D004402 3.3e-198 696.0 718 54.3
Ca_08683_v3 Cicer arietinum L. HOM05D003718 ORTHO05D004402 4.3e-198 695.7 800 52.2
AUR62023389 Chenopodium quinoa HOM05D003718 ORTHO05D004402 8.1e-197 691.4 803 50.1
HPP92_000351 Vanilla planifolia HOM05D003718 ORTHO05D004402 1.5e-195 687.2 804 48.8
Nitab4.5_0005411g0050 Nicotiana tabacum HOM05D003718 ORTHO05D004402 3.4e-195 686.0 755 52.7
BolC3t20629H Brassica oleracea HOM05D003718 ORTHO05D004402 1.1e-193 681.0 811 48.8
C03p83480 Brassica napus HOM05D003718 ORTHO05D004402 1.9e-182 643.7 824 46.8
Cpa.g.sc20.44 Carica papaya HOM05D003718 ORTHO05D004402 2.6e-171 606.7 812 45.6
BcaC01g00710 Brassica carinata HOM05D003718 ORTHO05D004402 9.1e-164 581.6 647 52.1
Ah.05g177770 Amaranthus hybridus HOM05D003718 ORTHO05D004402 9.4e-161 571.6 647 49.3
Nitab4.5_0005095g0020 Nicotiana tabacum HOM05D003718 ORTHO05D004402 3.0e-151 540.0 614 50.5
Actinidia37517 Actinidia chinensis HOM05D003718 ORTHO05D004402 3.7e-133 479.9 676 46.2
Mapoly0028s0115 Marchantia polymorpha HOM05D003718 ORTHO05D004402 3.7e-133 479.9 807 37.8
CsaV3_UNG055470 Cucumis sativus L. HOM05D003718 ORTHO05D004402 1.2e-126 458.4 544 48.5
AUR62043414 Chenopodium quinoa HOM05D003718 ORTHO05D004402 3.0e-114 417.2 435 53.6
HanXRQChr11g0336771 Helianthus annuus HOM05D003718 ORTHO05D004402 4.1e-108 396.7 433 53.3
vmacro02673 Vaccinium macrocarpon HOM05D003718 ORTHO05D004402 2.3e-106 391.0 393 56.7
SEGI_27157 Sequoiadendron giganteum HOM05D003718 ORTHO05D004402 5.8e-102 376.3 439 47.4
Psat0ss9065g0080 Pisum sativum HOM05D003718 ORTHO05D004402 1.2e-99 368.6 462 47.4
Haze_21407 Corylus avellana HOM05D003718 ORTHO05D004402 5.3e-95 353.2 305 61.0
FAN20G1425 Fragaria x ananassa HOM05D003718 ORTHO05D004402 2.9e-93 347.4 323 59.8
EL10Ac1g02094 Beta vulgaris HOM05D003718 ORTHO05D004402 5.8e-86 323.2 385 47.3
A08p15230 Brassica napus HOM05D003718 ORTHO05D001664 5.8e-86 323.2 673 34.8
AagrBONN_evm.TU.Sc2ySwM_340.234 Anthoceros agrestis HOM05D003718 ORTHO05D004402 5.9e-70 270.0 495 37.4
Hma1.2p1_0576F.1_g181950 Hydrangea macrophylla HOM05D003718 ORTHO05D004402 2.9e-61 241.1 387 41.9
CBR_g32152 Chara braunii HOM05D003718 ORTHO05D004402 3.2e-60 237.7 744 29.3
Pp3c7_6480 Physcomitrium patens HOM05D003718 ORTHO05D004402 2.3e-58 231.5 235 54.5
Actinidia09538 Actinidia chinensis HOM05D003718 ORTHO05D004402 5.1e-58 230.3 156 76.3
Psat7g093680 Pisum sativum HOM05D003718 ORTHO05D004402 1.1e-49 202.6 333 39.0
Actinidia09536 Actinidia chinensis HOM05D003718 ORTHO05D004402 1.7e-48 198.7 236 51.7
FAN27G1677 Fragaria x ananassa HOM05D003718 ORTHO05D004402 8.2e-48 196.4 188 55.9
SEGI_31370 Sequoiadendron giganteum HOM05D003718 ORTHO05D004402 8.2e-48 196.4 237 48.5
SHI09762 Sapria himalayana HOM05D003718 ORTHO05D004402 1.3e-40 172.6 201 51.7
HPP92_000418 Vanilla planifolia HOM05D003718 ORTHO05D004402 1.4e-39 169.1 457 30.2
CsaV3_UNG055460 Cucumis sativus L. HOM05D003718 ORTHO05D004402 2.0e-38 165.2 203 49.8
Psat6g086960 Pisum sativum HOM05D003718 ORTHO05D004402 1.8e-31 142.1 96 72.9
SMO367G0218 Selaginella moellendorffii HOM05D003718 ORTHO05D004402 8.6e-29 133.3 135 51.9
Actinidia30158 Actinidia chinensis HOM05D003718 ORTHO05D004402 8.0e-27 126.7 81 71.6
arahy.Tifrunner.gnm1.ann1.6B4W14 Arachis hypogaea HOM05D003718 ORTHO05D004402 4.4e-25 120.9 79 70.9
arahy.Tifrunner.gnm1.ann1.EX0EXI Arachis hypogaea HOM05D004703 ORTHO05D005801 1.3e-24 119.4 80 68.8
arahy.Tifrunner.gnm1.ann1.N0B60F Arachis hypogaea HOM05D003718 ORTHO05D004402 1.3e-24 119.4 80 68.8
arahy.Tifrunner.gnm1.ann1.S1G2KX Arachis hypogaea HOM05D003718 ORTHO05D004402 2.2e-24 118.6 194 38.7
Actinidia09537 Actinidia chinensis HOM05D003718 ORTHO05D004402 9.2e-23 113.2 241 35.7
Psat6g087000 Pisum sativum HOM05D003718 ORTHO05D004402 4.7e-19 100.9 67 76.1
Cre08.g368450 Chlamydomonas reinhardtii HOM05D003718 ORTHO05D004402 8.9e-18 96.7 218 36.2
Actinidia25800 Actinidia chinensis HOM05D003718 ORTHO05D004402 1.2e-17 96.3 214 32.7
Lsat_1_v5_gn_4_881 Lactuca sativa HOM05D003718 ORTHO05D004402 1.2e-17 96.3 186 32.8
Actinidia30157 Actinidia chinensis HOM05D003718 ORTHO05D057597 4.4e-17 94.4 86 58.1
Actinidia25801 Actinidia chinensis HOM05D003718 ORTHO05D004402 7.0e-15 87.0 118 46.6
Lsat_1_v5_gn_3_107020 Lactuca sativa HOM05D003718 ORTHO05D004402 1.6e-11 75.9 141 38.3
Gohir.A01G185580 Gossypium hirsutum HOM05D003718 ORTHO05D000087 3.1e-10 71.6 49 73.5
Lsat_1_v5_gn_9_27880 Lactuca sativa HOM05D003718 ORTHO05D004402 2.0e-09 68.9 92 42.4
arahy.Tifrunner.gnm1.ann1.LM6F6Z Arachis hypogaea HOM05D003718 ORTHO05D004402 2.4e-07 62.0 86 38.4


User provided reference genes

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