Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052022.1 Olea europaea HOM05D005664 ORTHO05D006509 0.0e+00 1431.0 723 100.0
Oeu015275.1 Olea europaea HOM05D005664 ORTHO05D006509 0.0e+00 1077.8 725 77.0
MSTRG.16129 Avicennia marina HOM05D005664 ORTHO05D006509 7.6e-186 654.8 741 51.4
Dinv19639 Davidia involucrata HOM05D005664 ORTHO05D006509 4.3e-173 612.5 728 50.7
SalBow8G4453 Salvia bowleyana HOM05D005664 ORTHO05D006509 1.2e-167 594.3 707 49.4
Dinv40921 Davidia involucrata HOM05D005664 ORTHO05D006509 2.8e-164 583.2 729 49.8
Migut.M01578 Erythranthe guttata HOM05D005664 ORTHO05D006509 1.7e-153 547.4 728 47.3
Hma1.2p1_0193F.1_g084390 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 2.5e-152 543.5 750 46.4
Oeu062669.1 Olea europaea HOM05D005664 ORTHO05D006509 2.1e-151 540.4 707 49.2
Cc05_g15770 Coffea canephora HOM05D005664 ORTHO05D006509 6.0e-151 538.9 753 47.4
CSS0022030 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 1.3e-150 537.7 807 45.1
CSS0015837 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 8.2e-140 501.9 740 46.6
CAN.G492.59 Capsicum annuum HOM05D005664 ORTHO05D006509 8.2e-140 501.9 735 45.6
vmacro11645 Vaccinium macrocarpon HOM05D005664 ORTHO05D006509 3.1e-139 500.0 777 44.4
Actinidia30345 Actinidia chinensis HOM05D005664 ORTHO05D006509 5.3e-139 499.2 756 44.8
Sopen10g001670 Solanum pennellii HOM05D005664 ORTHO05D006509 9.4e-136 488.4 738 44.4
Solyc10g005700.3 Solanum lycopersicum HOM05D005664 ORTHO05D006509 2.1e-135 487.3 740 44.7
TAR627G1206 Trochodendron aralioides HOM05D005664 ORTHO05D006509 2.7e-135 486.9 752 44.0
PGSC0003DMG400011270 Solanum tuberosum HOM05D005664 ORTHO05D006509 4.4e-133 479.6 743 44.3
Ciclev10007600m.g Citrus clementina HOM05D005664 ORTHO05D006509 2.8e-132 476.9 737 42.5
Potri.001G472600 Populus trichocarpa HOM05D005664 ORTHO05D006509 6.3e-132 475.7 750 43.9
Rhsim06G0235600 Rhododendron simsii HOM05D005664 ORTHO05D006509 6.3e-132 475.7 752 44.1
Atru.chr2.3903 Acer truncatum HOM05D005664 ORTHO05D006509 2.6e-130 470.3 742 43.3
Nitab4.5_0000611g0180 Nicotiana tabacum HOM05D005664 ORTHO05D006509 2.7e-127 460.3 726 43.3
QL08p000429 Quercus lobata HOM05D005664 ORTHO05D006509 8.8e-126 455.3 762 41.2
PGSC0003DMG400002313 Solanum tuberosum HOM05D005664 ORTHO05D006509 1.5e-125 454.5 744 43.3
unitig_37.g12212 Utricularia gibba HOM05D005664 ORTHO05D006509 7.4e-125 452.2 748 40.6
Manes.01G007400 Manihot esculenta HOM05D005664 ORTHO05D006509 2.2e-124 450.7 749 42.2
Potri.011G169200 Populus trichocarpa HOM05D005664 ORTHO05D006509 2.8e-124 450.3 749 42.5
SGA_v2.0_scaffold186G40232 Striga asiatica HOM05D005664 ORTHO05D006509 8.2e-124 448.7 747 41.1
TAR629G3046 Trochodendron aralioides HOM05D005664 ORTHO05D006509 9.1e-123 445.3 732 43.3
Sabra16G0320800 Salix brachista HOM05D005664 ORTHO05D006509 1.0e-121 441.8 730 43.3
CAN.G8.46 Capsicum annuum HOM05D005664 ORTHO05D006509 6.5e-121 439.1 758 42.9
Nitab4.5_0001622g0140 Nicotiana tabacum HOM05D005664 ORTHO05D006509 1.1e-120 438.3 720 42.6
Sopen12g008050 Solanum pennellii HOM05D005664 ORTHO05D006509 4.2e-120 436.4 755 41.9
Haze_09920 Corylus avellana HOM05D005664 ORTHO05D006509 1.6e-119 434.5 770 41.8
Solyc12g017230.2 Solanum lycopersicum HOM05D005664 ORTHO05D006509 6.1e-119 432.6 761 41.7
Sabra11G0137600 Salix brachista HOM05D005664 ORTHO05D006509 1.4e-118 431.4 744 41.3
Cfa016966 Carpinus fangiana HOM05D005664 ORTHO05D006509 1.8e-118 431.0 739 42.5
Nn1g09430 Nelumbo nucifera HOM05D005664 ORTHO05D006509 2.3e-118 430.6 885 36.0
Peaxi162Scf00006g00092 Petunia axillaris HOM05D005664 ORTHO05D006509 4.0e-118 429.9 733 42.8
Manes.01G007300 Manihot esculenta HOM05D005664 ORTHO05D006509 9.7e-117 425.2 750 40.8
Cpa.g.sc12.60 Carica papaya HOM05D005664 ORTHO05D006509 8.2e-116 422.2 830 38.4
Prupe.6G035900 Prunus persica HOM05D005664 ORTHO05D006509 2.2e-113 414.1 769 39.4
CSS0025023 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 5.5e-112 409.5 698 41.5
Thecc.07G000900 Theobroma cacao HOM05D005664 ORTHO05D006509 1.2e-111 408.3 777 40.0
MD11G1047100 Malus domestica HOM05D005664 ORTHO05D006509 3.6e-111 406.8 764 40.3
Eucgr.F01983 Eucalyptus grandis HOM05D005664 ORTHO05D006509 1.4e-110 404.8 779 37.7
Duzib170G1037 Durio zibethinus HOM05D005664 ORTHO05D006509 1.8e-110 404.4 776 39.6
Nn7g37452 Nelumbo nucifera HOM05D005664 ORTHO05D006509 3.4e-109 400.2 912 34.5
Duzib268G0032 Durio zibethinus HOM05D005664 ORTHO05D006509 1.7e-108 397.9 764 39.5
COL.COLO4_30921 Corchorus olitorius HOM05D005664 ORTHO05D006509 3.7e-108 396.7 743 38.6
Gorai.013G147600 Gossypium raimondii HOM05D005664 ORTHO05D006509 6.3e-108 396.0 771 39.4
MD03G1043600 Malus domestica HOM05D005664 ORTHO05D006509 8.3e-108 395.6 770 39.2
DCAR_016806 Daucus carota HOM05D005664 ORTHO05D006509 2.4e-107 394.0 727 39.8
Gohir.D13G131600 Gossypium hirsutum HOM05D005664 ORTHO05D006509 1.1e-104 385.2 771 38.8
MELO3C013227.2 Cucumis melo HOM05D005664 ORTHO05D006509 5.5e-104 382.9 742 37.7
CiPaw.12G143100 Carya illinoinensis HOM05D005664 ORTHO05D006509 1.2e-103 381.7 738 39.2
CsaV3_7G021290 Cucumis sativus L. HOM05D005664 ORTHO05D006509 1.8e-102 377.9 745 38.0
Hma1.2p1_0321F.1_g124370 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 2.2e-100 370.9 725 37.5
MSTRG.13052 Avicennia marina HOM05D005664 ORTHO05D006509 7.0e-99 365.9 552 45.5
ClCG09G021770 Citrullus lanatus HOM05D005664 ORTHO05D006509 9.2e-99 365.5 746 37.1
Gohir.A13G128200 Gossypium hirsutum HOM05D005664 ORTHO05D006509 9.2e-99 365.5 749 38.3
TWI39G0285 Tripterygium wilfordii HOM05D005664 ORTHO05D006509 1.7e-97 361.3 759 36.5
FvH4_3g41520 Fragaria vesca HOM05D005664 ORTHO05D006509 2.2e-92 344.4 764 36.3
FAN16G2562 Fragaria x ananassa HOM05D005664 ORTHO05D006509 1.2e-90 338.6 763 37.0
FAN11G0133 Fragaria x ananassa HOM05D005664 ORTHO05D006509 1.6e-90 338.2 772 36.1
Sed0014853 Sechium edule HOM05D005664 ORTHO05D006509 6.0e-90 336.3 741 36.0
FAN25G3031 Fragaria x ananassa HOM05D005664 ORTHO05D006509 3.0e-89 334.0 767 35.9
Sed0021044 Sechium edule HOM05D005664 ORTHO05D006509 3.6e-87 327.0 725 35.7
RcHm_v2.0_Chr5g0074471 Rosa chinensis HOM05D005664 ORTHO05D006509 6.2e-87 326.2 769 36.3
unitig_46.g18526 Utricularia gibba HOM05D005664 ORTHO05D006509 1.4e-86 325.1 650 38.2
FAN21G3314 Fragaria x ananassa HOM05D005664 ORTHO05D006509 1.3e-84 318.5 745 36.4
MBI14_g10255_MAGBIO Magnolia biondii HOM05D005664 ORTHO05D006509 7.3e-80 302.8 753 32.9
THA.LOC104813471 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 2.8e-79 300.8 767 33.2
Lsat_1_v5_gn_7_115861 Lactuca sativa HOM05D005664 ORTHO05D006509 6.8e-78 296.2 727 32.3
THA.LOC104813465 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 5.4e-75 286.6 779 32.1
HanXRQChr17g0546881 Helianthus annuus HOM05D005664 ORTHO05D006509 9.2e-75 285.8 732 33.5
Migut.H01706 Erythranthe guttata HOM05D005664 ORTHO05D006509 3.5e-74 283.9 742 35.4
Aqoxy1G04294 Aquilegia oxysepala HOM05D005664 ORTHO05D006509 8.6e-73 279.3 765 33.3
AL7G26500 Arabidopsis lyrata HOM05D005664 ORTHO05D006509 2.5e-72 277.7 783 32.3
Carub.0007s1448 Capsella rubella HOM05D005664 ORTHO05D006509 5.6e-72 276.6 777 32.7
arahy.Tifrunner.gnm1.ann1.C46LV5 Arachis hypogaea HOM05D005664 ORTHO05D006509 4.7e-71 273.5 751 34.6
Glyma.04G114300 Glycine max HOM05D005664 ORTHO05D006509 1.7e-68 265.0 753 34.0
AT4G26450 Arabidopsis thaliana HOM05D005664 ORTHO05D006509 6.4e-68 263.1 774 31.1
PSO063G4895 Papaver somniferum HOM05D005664 ORTHO05D006509 1.4e-67 261.9 758 31.1
PSO782G2174 Papaver somniferum HOM05D005664 ORTHO05D006509 2.4e-67 261.2 758 31.5
Lalb_Chr18g0048701 Lupinus albus HOM05D005664 ORTHO05D006509 9.2e-67 259.2 768 33.6
arahy.Tifrunner.gnm1.ann1.GFW533 Arachis hypogaea HOM05D005664 ORTHO05D006509 3.5e-66 257.3 750 33.5
Sp7g24360 Schrenkiella parvula HOM05D005664 ORTHO05D006509 4.6e-66 256.9 760 30.9
Aa31LG5G11790 Aethionema arabicum HOM05D005664 ORTHO05D006509 3.9e-65 253.8 755 30.9
Lj3g0022247 Lotus japonicus HOM05D005664 ORTHO05D006509 4.3e-64 250.4 755 31.4
Glyma.06G321000 Glycine max HOM05D005664 ORTHO05D006509 2.8e-63 247.7 738 33.2
Phvul.005G005100 Phaseolus vulgaris HOM05D005664 ORTHO05D006509 1.1e-62 245.7 750 31.7
VMungo1080G0452 Vigna mungo HOM05D005664 ORTHO05D006509 2.2e-60 238.0 734 31.1
CDE11G0421 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 2.9e-60 237.7 768 30.1
EL10Ac4g07635 Beta vulgaris HOM05D005664 ORTHO05D006509 8.4e-60 236.1 696 33.2
Thhalv10024531m.g Eutrema salsugineum HOM05D005664 ORTHO05D006509 2.4e-59 234.6 788 30.1
Sc03g0011800 Simmondsia chinensis HOM05D005664 ORTHO05D006509 2.4e-59 234.6 743 31.5
CARHR234010 Cardamine hirsuta HOM05D005664 ORTHO05D006509 3.2e-59 234.2 790 30.5
Ca_14130_v3 Cicer arietinum L. HOM05D005664 ORTHO05D006509 9.3e-59 232.6 698 31.5
Lj1A901T36 Lonicera japonica HOM05D005664 ORTHO05D006509 1.3e-57 228.8 300 48.7
Hund01929 Selenicereus undatus HOM05D005664 ORTHO05D006509 1.7e-57 228.4 712 31.3
Psat5g231360 Pisum sativum HOM05D005664 ORTHO05D006509 1.9e-56 224.9 774 30.4
ECA236G2587 Erigeron canadensis HOM05D005664 ORTHO05D006509 4.3e-56 223.8 670 30.9
A03p56710 Brassica napus HOM05D005664 ORTHO05D006509 1.3e-55 222.2 790 30.8
BraA03t14741Z Brassica rapa HOM05D005664 ORTHO05D006509 1.3e-55 222.2 790 30.8
Medtr3g009540 Medicago truncatula HOM05D005664 ORTHO05D006509 1.3e-55 222.2 759 31.1
AUR62040680 Chenopodium quinoa HOM05D005664 ORTHO05D006509 6.2e-55 219.9 704 29.8
CDE05G2921 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 8.1e-55 219.5 738 30.6
TPR.G16700 Trifolium pratense HOM05D005664 ORTHO05D006509 1.1e-54 219.2 793 30.8
BcaC06g32747 Brassica carinata HOM05D005664 ORTHO05D006509 1.3e-52 212.2 785 28.9
C01p22360 Brassica napus HOM05D005664 ORTHO05D006509 1.7e-52 211.8 757 30.3
Hund01927 Selenicereus undatus HOM05D005664 ORTHO05D006509 2.2e-52 211.5 673 31.1
BolC1t02167H Brassica oleracea HOM05D005664 ORTHO05D006509 2.9e-52 211.1 760 30.4
AUR62015929 Chenopodium quinoa HOM05D005664 ORTHO05D006509 2.9e-52 211.1 684 32.0
Lalb_Chr15g0079911 Lupinus albus HOM05D005664 ORTHO05D006509 2.9e-52 211.1 724 28.6
BcaC09g50709 Brassica carinata HOM05D005664 ORTHO05D006509 2.4e-51 208.0 756 30.8
BraA01t01725Z Brassica rapa HOM05D005664 ORTHO05D006509 4.2e-51 207.2 759 29.6
A01p17690 Brassica napus HOM05D005664 ORTHO05D006509 7.1e-51 206.5 759 29.2
C07p54910 Brassica napus HOM05D005664 ORTHO05D006509 1.5e-48 198.7 793 29.5
BolC7t45979H Brassica oleracea HOM05D005664 ORTHO05D006509 1.5e-48 198.7 793 29.5
GSVIVG01014850001 Vitis vinifera HOM05D005664 ORTHO05D006509 1.8e-46 191.8 173 56.1
CANSAT11G1251 Cannabis sativa HOM05D005664 ORTHO05D006509 1.2e-45 189.1 713 29.9
Ah.06g181030 Amaranthus hybridus HOM05D000037 ORTHO05D006509 5.5e-43 180.3 698 29.8
Ah.04g166380 Amaranthus hybridus HOM05D005664 ORTHO05D006509 7.4e-40 169.9 690 30.7
Lj1A901G38 Lonicera japonica HOM05D005664 ORTHO05D006509 2.9e-36 157.9 122 60.7
HPP92_019365 Vanilla planifolia HOM05D005664 ORTHO05D006509 1.2e-29 136.0 697 26.7
MSTRG.7045 Avicennia marina HOM05D005664 ORTHO05D006509 4.3e-24 117.5 96 60.4
ATR0021G035 Amborella trichopoda HOM05D005664 ORTHO05D006509 1.1e-22 112.8 662 27.8
Zm00001eb422560 Zea mays HOM05D019841 ORTHO05D006509 2.1e-18 98.6 769 24.3
Zm00001eb082760 Zea mays HOM05D019841 ORTHO05D006509 2.6e-16 91.7 852 23.9
Os02g0550000 Oryza sativa ssp. japonica HOM05D019841 ORTHO05D037008 1.3e-15 89.4 784 24.0
Os04g0431000 Oryza sativa ssp. japonica HOM05D019841 ORTHO05D006509 1.2e-13 82.8 214 31.8
Psat6g196680 Pisum sativum HOM05D005664 ORTHO05D006509 1.8e-09 68.9 89 40.4
Actinidia33104 Actinidia chinensis HOM05D005664 ORTHO05D006509 7.4e-08 63.5 38 73.7
Zm00001eb243360 Zea mays HOM05D019841 ORTHO05D037008 7.4e-08 63.5 158 32.3
SEGI_32826 Sequoiadendron giganteum HOM05D005664 ORTHO05D006509 2.8e-07 61.6 106 45.3
HPP92_028056 Vanilla planifolia HOM05D005664 ORTHO05D006509 2.8e-07 61.6 208 32.7


User provided reference genes

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