Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052016.1 Olea europaea HOM05D006002 ORTHO05D007651 2.1e-140 502.3 245 100.0
Migut.M01570 Erythranthe guttata HOM05D006002 ORTHO05D007651 7.4e-85 317.8 240 65.4
MSTRG.16122 Avicennia marina HOM05D006002 ORTHO05D007651 1.4e-83 313.5 235 66.8
Rhsim04G0006400 Rhododendron simsii HOM05D006002 ORTHO05D007651 5.3e-83 311.6 228 67.5
Actinidia37107 Actinidia chinensis HOM05D006002 ORTHO05D007651 4.5e-82 308.5 240 64.6
Nitab4.5_0001235g0050 Nicotiana tabacum HOM05D006002 ORTHO05D007651 4.5e-82 308.5 212 70.3
PGSC0003DMG400022243 Solanum tuberosum HOM05D006002 ORTHO05D007651 1.3e-81 307.0 215 69.8
Sopen07g034460 Solanum pennellii HOM05D006002 ORTHO05D007651 2.5e-80 302.8 215 69.8
CAN.G943.23 Capsicum annuum HOM05D006002 ORTHO05D007651 3.2e-80 302.4 215 69.3
Cc05_g15870 Coffea canephora HOM05D006002 ORTHO05D007651 3.2e-80 302.4 232 65.1
Nitab4.5_0000294g0110 Nicotiana tabacum HOM05D006002 ORTHO05D007651 5.5e-80 301.6 214 69.2
vmacro09790 Vaccinium macrocarpon HOM05D006002 ORTHO05D007651 1.2e-79 300.4 228 67.1
Lsat_1_v5_gn_7_116060 Lactuca sativa HOM05D006002 ORTHO05D007651 1.6e-79 300.1 217 65.0
Solyc07g066280.3 Solanum lycopersicum HOM05D006002 ORTHO05D007651 6.1e-79 298.1 215 68.4
Peaxi162Scf00232g00102 Petunia axillaris HOM05D006002 ORTHO05D007651 1.8e-78 296.6 208 68.3
SGA_v2.0_scaffold7G03564 Striga asiatica HOM05D006002 ORTHO05D007651 6.7e-78 294.7 242 63.2
CSS0008604 Camellia sinensis var. sinensis HOM05D006002 ORTHO05D007651 1.5e-77 293.5 224 67.0
QL04p088541 Quercus lobata HOM05D006002 ORTHO05D007651 5.7e-77 291.6 241 62.2
unitig_748.g7639 Utricularia gibba HOM05D006002 ORTHO05D007651 2.8e-76 289.3 230 63.9
Actinidia35439 Actinidia chinensis HOM05D006002 ORTHO05D007651 8.2e-76 287.7 226 65.0
Hma1.2p1_0193F.1_g084460 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 1.6e-74 283.5 215 63.7
Nn3g20175 Nelumbo nucifera HOM05D006002 ORTHO05D007651 4.5e-74 282.0 239 58.6
Medtr7g107330 Medicago truncatula HOM05D006002 ORTHO05D007651 7.7e-74 281.2 239 57.7
Cfa022974 Carpinus fangiana HOM05D006002 ORTHO05D007651 1.0e-73 280.8 251 59.8
MD10G1197800 Malus domestica HOM05D006002 ORTHO05D007651 1.0e-73 280.8 228 62.7
Potri.003G221400 Populus trichocarpa HOM05D006002 ORTHO05D007651 1.3e-73 280.4 243 60.5
QL04p088993 Quercus lobata HOM05D006002 ORTHO05D007651 1.3e-73 280.4 202 67.3
TAR627G1081 Trochodendron aralioides HOM05D006002 ORTHO05D007651 1.3e-73 280.4 238 59.7
Hma1.2p1_0193F.1_g084470 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 2.9e-73 279.3 208 64.9
Manes.03G102600 Manihot esculenta HOM05D006002 ORTHO05D007651 3.8e-73 278.9 227 61.2
Psat3g026200 Pisum sativum HOM05D006002 ORTHO05D007651 6.5e-73 278.1 236 57.2
TWI53G1943 Tripterygium wilfordii HOM05D006002 ORTHO05D007651 8.5e-73 277.7 219 63.5
Ca_09098_v3 Cicer arietinum L. HOM05D006002 ORTHO05D007651 1.5e-72 276.9 228 60.1
Sabra03G0164800 Salix brachista HOM05D006002 ORTHO05D007651 1.9e-72 276.6 221 62.9
CANSAT56G1259 Cannabis sativa HOM05D006002 ORTHO05D007651 3.2e-72 275.8 227 60.8
HanXRQChr11g0335201 Helianthus annuus HOM05D006002 ORTHO05D007651 2.7e-71 272.7 224 59.8
SalBow8G1862 Salvia bowleyana HOM05D006002 ORTHO05D007651 2.7e-71 272.7 225 60.9
Atru.chr2.1886 Acer truncatum HOM05D006002 ORTHO05D007651 3.6e-71 272.3 211 62.6
arahy.Tifrunner.gnm1.ann1.0RH0I3 Arachis hypogaea HOM05D006002 ORTHO05D007651 3.6e-71 272.3 211 61.1
Haze_07820 Corylus avellana HOM05D006002 ORTHO05D007651 3.6e-71 272.3 199 66.8
arahy.Tifrunner.gnm1.ann1.HWL53Q Arachis hypogaea HOM05D006002 ORTHO05D007651 8.0e-71 271.2 211 60.7
Glyma.15G260100 Glycine max HOM05D006002 ORTHO05D007651 8.0e-71 271.2 207 61.8
Eucgr.F01438 Eucalyptus grandis HOM05D006002 ORTHO05D007651 1.4e-70 270.4 219 61.2
Lj3g0018048 Lotus japonicus HOM05D006002 ORTHO05D007651 1.4e-70 270.4 222 59.0
Prupe.4G144100 Prunus persica HOM05D006002 ORTHO05D007651 1.8e-70 270.0 202 65.3
VMungo1080G0998 Vigna mungo HOM05D001395 ORTHO05D002039 2.3e-70 269.6 221 59.3
Ah.04g163380 Amaranthus hybridus HOM05D006002 ORTHO05D007651 3.0e-70 269.2 216 62.0
Cpa.g.sc42.79 Carica papaya HOM05D006002 ORTHO05D007651 4.0e-70 268.9 221 61.1
Sc03g0007860 Simmondsia chinensis HOM05D006002 ORTHO05D007651 4.4e-69 265.4 209 62.2
Glyma.08G167200 Glycine max HOM05D006002 ORTHO05D007651 1.7e-68 263.5 224 58.9
FAN16G0275 Fragaria x ananassa HOM05D006002 ORTHO05D007651 2.2e-68 263.1 202 62.9
Phvul.005G050900 Phaseolus vulgaris HOM05D006002 ORTHO05D007651 8.2e-68 261.2 222 59.5
EL10Ac4g08518 Beta vulgaris HOM05D006002 ORTHO05D007651 1.1e-67 260.8 227 58.1
MELO3C010553.2 Cucumis melo HOM05D006002 ORTHO05D007651 1.4e-67 260.4 218 60.6
Aqoxy1G01586 Aquilegia oxysepala HOM05D006002 ORTHO05D007651 2.4e-67 259.6 227 54.6
Ciclev10020646m.g Citrus clementina HOM05D006002 ORTHO05D007651 2.4e-67 259.6 200 61.0
FvH4_3g16091 Fragaria vesca HOM05D006002 ORTHO05D007651 2.4e-67 259.6 197 63.5
FAN11G0453 Fragaria x ananassa HOM05D006002 ORTHO05D007651 2.4e-67 259.6 197 64.0
CsaV3_2G022200 Cucumis sativus L. HOM05D006002 ORTHO05D007651 5.3e-67 258.5 217 60.8
Eucgr.F01442 Eucalyptus grandis HOM05D006002 ORTHO05D007651 5.3e-67 258.5 199 62.8
Lj8A185G55 Lonicera japonica HOM05D006002 ORTHO05D007651 5.3e-67 258.5 198 67.2
Hund02296 Selenicereus undatus HOM05D006002 ORTHO05D007651 5.3e-67 258.5 206 63.6
THA.LOC104819332 Tarenaya hassleriana HOM05D006002 ORTHO05D007651 9.1e-67 257.7 198 61.1
COL.COLO4_25103 Corchorus olitorius HOM05D006002 ORTHO05D007651 2.0e-66 256.5 228 60.1
FAN25G3512 Fragaria x ananassa HOM05D006002 ORTHO05D007651 4.5e-66 255.4 234 56.0
RcHm_v2.0_Chr5g0027061 Rosa chinensis HOM05D006002 ORTHO05D007651 5.9e-66 255.0 232 59.1
PSO675G3741 Papaver somniferum HOM05D006002 ORTHO05D007651 1.3e-65 253.8 206 60.7
ClCG11G016270 Citrullus lanatus HOM05D006002 ORTHO05D007651 3.8e-65 252.3 209 61.2
Sed0002243 Sechium edule HOM05D006002 ORTHO05D007651 2.5e-64 249.6 212 60.8
Gohir.A05G076100 Gossypium hirsutum HOM05D006002 ORTHO05D007651 5.5e-64 248.4 212 59.9
CDE02G2905 Ceratophyllum demersum HOM05D006002 ORTHO05D007651 1.6e-63 246.9 216 55.1
MBI02_g43301_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 2.1e-63 246.5 240 51.2
Gohir.D05G078800 Gossypium hirsutum HOM05D006002 ORTHO05D007651 3.6e-63 245.7 212 59.4
Gorai.009G080200 Gossypium raimondii HOM05D006002 ORTHO05D007651 3.6e-63 245.7 212 59.4
PSO541G1619 Papaver somniferum HOM05D006002 ORTHO05D007651 4.7e-63 245.4 217 56.7
ECA236G2913 Erigeron canadensis HOM05D006002 ORTHO05D007651 1.8e-62 243.4 200 60.5
CARHR278060 Cardamine hirsuta HOM05D006002 ORTHO05D007651 6.8e-62 241.5 248 50.4
CiPaw.11G062100 Carya illinoinensis HOM05D006002 ORTHO05D007651 2.0e-61 240.0 213 58.2
QL03p043202 Quercus lobata HOM05D006002 ORTHO05D007651 2.6e-61 239.6 174 67.8
Thecc.03G324000 Theobroma cacao HOM05D006002 ORTHO05D007651 2.6e-61 239.6 231 55.4
Aa31LG1G17780 Aethionema arabicum HOM05D006002 ORTHO05D007651 9.8e-61 237.7 198 57.1
Duzib168G0541 Durio zibethinus HOM05D006002 ORTHO05D007651 9.8e-61 237.7 235 55.3
PGR083G2675 Punica granatum HOM05D006002 ORTHO05D007651 1.7e-60 236.9 205 60.0
Thhalv10004403m.g Eutrema salsugineum HOM05D006002 ORTHO05D007651 4.8e-60 235.3 252 49.6
BraA06t26026Z Brassica rapa HOM05D006002 ORTHO05D007651 1.8e-59 233.4 193 57.0
BcaB02g09782 Brassica carinata HOM05D006002 ORTHO05D007651 3.1e-59 232.6 201 56.2
BcaC01g02672 Brassica carinata HOM05D006002 ORTHO05D007651 4.1e-59 232.3 198 57.1
A06p30870 Brassica napus HOM05D006002 ORTHO05D007651 5.4e-59 231.9 193 56.0
AT5G64150 Arabidopsis thaliana HOM05D006002 ORTHO05D007651 7.0e-59 231.5 220 52.3
C03p62100 Brassica napus HOM05D006002 ORTHO05D007651 7.0e-59 231.5 195 57.4
BolC3t18471H Brassica oleracea HOM05D006002 ORTHO05D007651 7.0e-59 231.5 195 57.4
AL8G41420 Arabidopsis lyrata HOM05D006002 ORTHO05D007651 9.1e-59 231.1 234 50.9
Carub.0008s2494 Capsella rubella HOM05D006002 ORTHO05D007651 1.1e-56 224.2 200 54.5
Sp2g27210 Schrenkiella parvula HOM05D006002 ORTHO05D007651 7.2e-56 221.5 199 53.3
TPR.G18376 Trifolium pratense HOM05D006002 ORTHO05D007651 1.6e-55 220.3 157 66.2
MBI02_g20986_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 3.0e-54 216.1 265 45.3
SEGI_37419 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 5.2e-54 215.3 206 49.0
Lalb_Chr25g0284701 Lupinus albus HOM05D006002 ORTHO05D007651 8.8e-54 214.5 155 63.9
Gohir.1Z049302 Gossypium hirsutum HOM05D006002 ORTHO05D007651 5.4e-51 205.3 213 53.5
GSVIVG01020461001 Vitis vinifera HOM05D006002 ORTHO05D007651 4.3e-48 195.7 127 73.2
HPP92_001894 Vanilla planifolia HOM05D006002 ORTHO05D004222 7.3e-48 194.9 216 50.9
Dinv42524 Davidia involucrata HOM05D006002 ORTHO05D007651 1.6e-47 193.7 242 45.9
Potri.018G000850 Populus trichocarpa HOM05D006002 ORTHO05D007651 2.1e-47 193.4 187 53.5
SMO145G0236 Selaginella moellendorffii HOM05D006002 ORTHO05D007651 5.2e-46 188.7 203 48.3
QL04p062372 Quercus lobata HOM05D006002 ORTHO05D007651 1.2e-45 187.6 123 73.2
QL04p088694 Quercus lobata HOM05D006002 ORTHO05D007651 1.1e-43 181.0 174 56.3
ATR0165G036 Amborella trichopoda HOM05D006002 ORTHO05D007651 7.8e-42 174.9 127 61.4
AUR62041934 Chenopodium quinoa HOM05D006002 ORTHO05D007651 3.0e-41 172.9 215 47.0
MD05G1214000 Malus domestica HOM05D006002 ORTHO05D007651 8.6e-41 171.4 164 55.5
AUR62035491 Chenopodium quinoa HOM05D006002 ORTHO05D007651 2.1e-39 166.8 215 47.0
AagrBONN_evm.TU.Sc2ySwM_344.4971 Anthoceros agrestis HOM05D006002 ORTHO05D007651 1.4e-38 164.1 195 43.6
MD05G1214300 Malus domestica HOM05D006002 ORTHO05D007651 7.5e-37 158.3 110 72.7
Potri.001G003632 Populus trichocarpa HOM05D006002 ORTHO05D007651 1.3e-36 157.5 109 69.7
Pp3c1_22930 Physcomitrium patens HOM05D006002 ORTHO05D007651 3.7e-36 156.0 120 59.2
Os12g0612500 Oryza sativa ssp. japonica HOM05D006002 ORTHO05D007651 2.0e-34 150.2 212 43.9
Mapoly0051s0043 Marchantia polymorpha HOM05D006002 ORTHO05D007651 4.6e-34 149.1 312 32.4
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 1.8e-30 137.1 127 55.1
BcaB04g17517 Brassica carinata HOM05D006002 ORTHO05D007651 2.4e-27 126.7 91 63.7
MCO01G477 Micromonas commoda HOM05D006002 ORTHO05D007651 3.4e-21 106.3 232 32.3
PRCOL_00003514 Prasinoderma coloniale HOM05D006002 ORTHO05D007651 7.6e-21 105.1 226 33.2
TPR.G32276 Trifolium pratense HOM05D006002 ORTHO05D007651 4.1e-19 99.4 108 45.4
Cre07.g337516 Chlamydomonas reinhardtii HOM05D006002 ORTHO05D007651 3.5e-18 96.3 107 46.7
CAN.G42.13 Capsicum annuum HOM05D006002 ORTHO05D007651 1.9e-11 73.9 70 57.1


User provided reference genes

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