Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052011.1 Olea europaea HOM05D005971 ORTHO05D007459 0.0e+00 2008.0 1048 100.0
Dinv19623 Davidia involucrata HOM05D005971 ORTHO05D007459 0.0e+00 1177.9 1019 59.4
Migut.M01561 Erythranthe guttata HOM05D005971 ORTHO05D007459 0.0e+00 1157.9 1013 58.3
Actinidia35435 Actinidia chinensis HOM05D005971 ORTHO05D007459 0.0e+00 1095.1 1022 55.5
SGA_v2.0_scaffold7G03577 Striga asiatica HOM05D005971 ORTHO05D007459 3.6e-311 1071.6 1014 54.1
Lj1C905G3 Lonicera japonica HOM05D005971 ORTHO05D007459 6.5e-311 1070.8 1005 55.0
Cc05_g16010 Coffea canephora HOM05D005971 ORTHO05D007459 4.8e-306 1054.7 1008 55.1
CSS0033662 Camellia sinensis var. sinensis HOM05D005971 ORTHO05D007459 1.4e-305 1053.1 964 56.4
CSS0049989 Camellia sinensis var. sinensis HOM05D005971 ORTHO05D007459 4.2e-302 1041.6 951 56.6
QL04p073974 Quercus lobata HOM05D005971 ORTHO05D007459 3.0e-300 1035.4 1096 50.5
TAR626G0017 Trochodendron aralioides HOM05D005971 ORTHO05D007459 3.1e-297 1025.4 1027 52.4
Sopen10g001570 Solanum pennellii HOM05D005971 ORTHO05D007459 5.3e-297 1024.6 1016 52.8
CAN.G492.69 Capsicum annuum HOM05D005971 ORTHO05D007459 2.2e-295 1019.2 1014 52.6
Potri.001G457550 Populus trichocarpa HOM05D005971 ORTHO05D007459 1.0e-292 1010.4 1002 52.7
SalBow8G3201 Salvia bowleyana HOM05D005971 ORTHO05D007459 1.1e-291 1006.9 985 53.1
Atru.chr12.2184 Acer truncatum HOM05D005971 ORTHO05D007459 9.6e-291 1003.8 1023 50.4
Cfa019419 Carpinus fangiana HOM05D005971 ORTHO05D007459 7.6e-288 994.2 1024 51.6
Sabra16G0310100 Salix brachista HOM05D005971 ORTHO05D007459 5.1e-284 981.5 1030 50.6
MD05G1219300 Malus domestica HOM05D005971 ORTHO05D007459 1.9e-283 979.5 1020 50.7
Peaxi162Scf00267g01016 Petunia axillaris HOM05D005971 ORTHO05D007459 2.8e-282 975.7 999 51.5
Nitab4.5_0000611g0060 Nicotiana tabacum HOM05D005971 ORTHO05D007459 3.1e-281 972.2 965 53.7
Ciclev10018677m.g Citrus clementina HOM05D005971 ORTHO05D007459 1.9e-275 953.0 1013 49.4
FvH4_3g15860 Fragaria vesca HOM05D005971 ORTHO05D007459 1.4e-270 936.8 1018 48.3
Solyc10g005600.4 Solanum lycopersicum HOM05D005971 ORTHO05D007459 2.7e-269 932.6 984 51.2
FAN11G3334 Fragaria x ananassa HOM05D005971 ORTHO05D007459 3.6e-269 932.2 1018 48.4
Nitab4.5_0004488g0030 Nicotiana tabacum HOM05D005971 ORTHO05D007459 7.9e-269 931.0 986 50.4
FAN16G0465 Fragaria x ananassa HOM05D005971 ORTHO05D007459 2.3e-268 929.5 1019 48.9
RcHm_v2.0_Chr5g0026671 Rosa chinensis HOM05D005971 ORTHO05D007459 6.7e-268 927.9 1015 48.3
Glyma.15G255000 Glycine max HOM05D005971 ORTHO05D007459 4.2e-262 908.7 1019 47.0
CANSAT80G2256 Cannabis sativa HOM05D005971 ORTHO05D007459 9.1e-257 891.0 1018 47.0
Phvul.005G056400 Phaseolus vulgaris HOM05D005971 ORTHO05D007459 3.5e-256 889.0 1018 45.7
Duzib268G0338 Durio zibethinus HOM05D005971 ORTHO05D007459 5.7e-251 871.7 1016 46.5
Ca_03684_v3 Cicer arietinum L. HOM05D005971 ORTHO05D007459 9.7e-251 870.9 1020 46.7
TPR.G9756 Trifolium pratense HOM05D005971 ORTHO05D007459 1.3e-250 870.5 1027 46.5
DCAR_009638 Daucus carota HOM05D005971 ORTHO05D007459 2.2e-250 869.8 928 50.1
Lalb_Chr25g0285011 Lupinus albus HOM05D005971 ORTHO05D007459 2.8e-250 869.4 1007 45.6
Psat1g011400 Pisum sativum HOM05D005971 ORTHO05D007459 1.6e-248 863.6 1019 45.4
Medtr2g069560 Medicago truncatula HOM05D005971 ORTHO05D007459 2.6e-248 862.8 1017 46.1
ECA240G1928 Erigeron canadensis HOM05D005971 ORTHO05D007459 1.3e-247 860.5 1013 46.9
vmacro09786 Vaccinium macrocarpon HOM05D005971 ORTHO05D007459 2.9e-247 859.4 1012 47.2
TWI39G0032 Tripterygium wilfordii HOM05D005971 ORTHO05D007459 6.5e-247 858.2 1023 46.6
Gorai.013G178300 Gossypium raimondii HOM05D005971 ORTHO05D007459 8.5e-247 857.8 1019 46.3
Lj3g0007743 Lotus japonicus HOM05D005971 ORTHO05D007459 8.5e-247 857.8 1022 45.7
Lsat_1_v5_gn_7_71401 Lactuca sativa HOM05D005971 ORTHO05D007459 8.8e-244 847.8 1013 46.7
arahy.Tifrunner.gnm1.ann1.MUD8D6 Arachis hypogaea HOM05D005971 ORTHO05D007459 2.0e-243 846.7 1005 45.0
Rhsim04G0005800 Rhododendron simsii HOM05D005971 ORTHO05D007459 2.9e-239 832.8 1135 43.3
ClCG11G016380 Citrullus lanatus HOM05D005971 ORTHO05D007459 8.5e-239 831.2 1007 44.2
Prupe.4G140600 Prunus persica HOM05D005971 ORTHO05D007459 4.2e-238 828.9 910 48.2
HanXRQChr05g0160991 Helianthus annuus HOM05D005971 ORTHO05D007459 5.2e-236 822.0 1005 45.5
CsaV3_4G031820 Cucumis sativus L. HOM05D005971 ORTHO05D007459 4.4e-235 818.9 1021 44.3
PSO675G3107 Papaver somniferum HOM05D005971 ORTHO05D007459 9.8e-235 817.8 1008 43.8
PSO017G5934 Papaver somniferum HOM05D005971 ORTHO05D007459 9.1e-233 811.2 1008 43.7
PGR031G0315 Punica granatum HOM05D005971 ORTHO05D007459 2.0e-232 810.1 1018 44.0
THA.LOC104822751 Tarenaya hassleriana HOM05D005971 ORTHO05D007459 1.3e-231 807.4 994 43.8
AL1G14000 Arabidopsis lyrata HOM05D005971 ORTHO05D007459 2.3e-231 806.6 1004 43.2
GSVIVG01020430001 Vitis vinifera HOM05D005971 ORTHO05D007459 1.9e-230 803.5 887 47.7
Carub.0001s0356 Capsella rubella HOM05D005971 ORTHO05D007459 3.3e-230 802.7 1004 43.1
C05p02580 Brassica napus HOM05D005971 ORTHO05D007459 2.8e-229 799.7 994 43.6
BolC5t29039H Brassica oleracea HOM05D005971 ORTHO05D007459 2.8e-229 799.7 994 43.4
AT1G04390 Arabidopsis thaliana HOM05D005971 ORTHO05D007459 8.9e-228 794.7 1004 43.0
Aa31LG1G20480 Aethionema arabicum HOM05D005971 ORTHO05D007459 1.2e-227 794.3 1006 41.9
A10p02830 Brassica napus HOM05D005971 ORTHO05D007459 5.7e-227 792.0 1003 43.5
Atru.chr12.2179 Acer truncatum HOM05D005971 ORTHO05D007459 3.7e-226 789.3 737 52.6
Manes.14G015836 Manihot esculenta HOM05D005971 ORTHO05D007459 1.8e-225 786.9 826 48.8
Ah.06g185720 Amaranthus hybridus HOM05D005971 ORTHO05D007459 1.6e-221 773.9 1024 40.1
EL10Ac2g03354 Beta vulgaris HOM05D005971 ORTHO05D007459 6.8e-220 768.5 1005 41.2
Aqoxy2G04113 Aquilegia oxysepala HOM05D005971 ORTHO05D007459 8.3e-218 761.5 1018 42.9
Sed0013026 Sechium edule HOM05D005971 ORTHO05D007459 6.0e-216 755.4 916 44.1
Hma1.2p1_0637F.1_g193590 Hydrangea macrophylla HOM05D005971 ORTHO05D007459 1.7e-202 710.7 1033 41.9
FAN21G1476 Fragaria x ananassa HOM05D005971 ORTHO05D007459 2.9e-202 709.9 979 41.5
GSVIVG01020427001 Vitis vinifera HOM05D005971 ORTHO05D007459 1.6e-200 704.1 900 44.0
Nn7g37820 Nelumbo nucifera HOM05D005971 ORTHO05D007459 1.9e-193 680.6 846 45.2
Sc06g0001560 Simmondsia chinensis HOM05D005971 ORTHO05D007459 1.6e-192 677.6 731 46.6
Eucgr.F03182 Eucalyptus grandis HOM05D005971 ORTHO05D007459 5.1e-191 672.5 738 48.0
Hund12466 Selenicereus undatus HOM05D005971 ORTHO05D007459 1.3e-189 667.9 905 39.9
BraA10t42550Z Brassica rapa HOM05D005971 ORTHO05D007459 6.9e-188 662.1 998 38.7
Thecc.07G154200 Theobroma cacao HOM05D005971 ORTHO05D007459 6.9e-188 662.1 836 45.2
MBI02_g40085_MAGBIO Magnolia biondii HOM05D005971 ORTHO05D007459 8.1e-181 638.6 823 42.4
VMungo1080G0173 Vigna mungo HOM05D005971 ORTHO05D007459 3.2e-177 626.7 855 41.8
Thhalv10006788m.g Eutrema salsugineum HOM05D005971 ORTHO05D007459 6.7e-175 619.0 1004 36.8
AUR62038398 Chenopodium quinoa HOM05D005971 ORTHO05D007459 1.5e-174 617.8 1019 35.9
PGSC0003DMG402011239 Solanum tuberosum HOM05D005971 ORTHO05D007459 3.4e-171 606.7 559 54.9
CARHR003720 Cardamine hirsuta HOM05D005971 ORTHO05D007459 3.8e-162 576.6 710 43.1
MELO3C010564.2 Cucumis melo HOM05D005971 ORTHO05D007459 7.4e-158 562.4 1034 35.5
Sp1g03210 Schrenkiella parvula HOM05D005971 ORTHO05D007459 6.9e-156 555.8 699 42.2
ATR0165G004 Amborella trichopoda HOM05D005971 ORTHO05D007459 9.4e-145 518.8 1009 33.7
Cpa.g.sc10.37 Carica papaya HOM05D005971 ORTHO05D007459 9.4e-145 518.8 812 39.8
Gohir.D13G157500 Gossypium hirsutum HOM05D005971 ORTHO05D007459 1.4e-140 505.0 569 47.3
PGSC0003DMG401011239 Solanum tuberosum HOM05D005971 ORTHO05D007459 5.2e-119 433.3 456 51.8
Gohir.A13G153066 Gossypium hirsutum HOM05D005971 ORTHO05D007459 1.0e-111 409.1 410 48.5
Zm00001eb273960 Zea mays HOM05D005971 ORTHO05D007459 1.3e-109 402.1 895 31.4
CDE12G0091 Ceratophyllum demersum HOM05D005971 ORTHO05D007459 3.5e-107 394.0 748 34.8
unitig_26.g10082 Utricularia gibba HOM05D005971 ORTHO05D007459 1.8e-95 355.1 984 29.1
FAN25G3291 Fragaria x ananassa HOM05D005971 ORTHO05D007459 1.1e-81 309.3 345 47.0
Gohir.A13G153099 Gossypium hirsutum HOM05D005971 ORTHO05D007459 6.9e-79 300.1 500 41.4
Mapoly0060s0028 Marchantia polymorpha HOM05D005971 ORTHO05D007459 3.3e-73 281.2 976 26.7
Peaxi162Scf01123g00008 Petunia axillaris HOM05D005971 ORTHO05D007459 2.0e-70 271.9 233 56.2
Pp3c6_21780 Physcomitrium patens HOM05D005971 ORTHO05D007459 2.7e-67 261.5 1014 24.7
Cpa.g.sc10.38 Carica papaya HOM05D005971 ORTHO05D007459 6.7e-66 256.9 240 51.7
HPP92_026348 Vanilla planifolia HOM05D005971 ORTHO05D007459 4.2e-60 237.7 313 38.0
Nn7g37821 Nelumbo nucifera HOM05D005971 ORTHO05D007459 7.9e-59 233.4 181 59.1
Peaxi162Scf00095g00013 Petunia axillaris HOM05D005971 ORTHO05D007459 1.3e-58 232.6 248 51.2
HPP92_026349 Vanilla planifolia HOM05D005971 ORTHO05D007459 4.9e-53 214.2 521 30.5
Peaxi162Scf01123g00003 Petunia axillaris HOM05D005971 ORTHO05D007459 1.2e-51 209.5 427 33.5
Haze_08564 Corylus avellana HOM05D005971 ORTHO05D000006 1.8e-47 195.7 186 54.8
Atru.chr12.2180 Acer truncatum HOM05D005971 ORTHO05D007459 3.1e-47 194.9 225 47.6
CARHR003730 Cardamine hirsuta HOM05D005971 ORTHO05D007459 1.6e-43 182.6 214 46.7
Os06g0674800 Oryza sativa ssp. japonica HOM05D005971 ORTHO05D007459 7.4e-41 173.7 443 29.8
VMungo1080G1570 Vigna mungo HOM05D005971 ORTHO05D007459 1.8e-39 169.1 131 56.5
arahy.Tifrunner.gnm1.ann1.Q40ZT9 Arachis hypogaea HOM05D005971 ORTHO05D007459 9.1e-39 166.8 197 42.1
GSVIVG01020425001 Vitis vinifera HOM05D005971 ORTHO05D007459 4.5e-30 137.9 137 48.2
Gohir.D13G157600 Gossypium hirsutum HOM05D005971 ORTHO05D007459 8.5e-29 133.7 193 42.5
GSVIVG01020426001 Vitis vinifera HOM05D005971 ORTHO05D007459 7.2e-28 130.6 147 44.9
COL.COLO4_20820 Corchorus olitorius HOM05D005971 ORTHO05D007459 5.2e-26 124.4 113 51.3
Glyma.08G171633 Glycine max HOM05D005971 ORTHO05D007459 1.3e-24 119.8 94 58.5
Zm00001eb395680 Zea mays HOM05D005971 ORTHO05D007459 1.2e-22 113.2 245 32.2
Sc06g0001570 Simmondsia chinensis HOM05D005971 ORTHO05D007459 8.5e-21 107.1 109 51.4
C03p00610 Brassica napus HOM05D005971 ORTHO05D040551 1.4e-15 89.7 114 43.0
Glyma.13G098800 Glycine max HOM05D005971 ORTHO05D007459 1.8e-15 89.4 103 47.6
Glyma.13G358366 Glycine max HOM05D005971 ORTHO05D007459 4.1e-15 88.2 103 47.6
BolC3t12626H Brassica oleracea HOM05D005971 ORTHO05D040551 2.0e-14 85.9 137 36.5
CDE12G0613 Ceratophyllum demersum HOM05D005971 ORTHO05D007459 1.1e-12 80.1 93 38.7
CAN.G1199.4 Capsicum annuum HOM05D002053 ORTHO05D007459 1.8e-10 72.8 68 51.5
GSVIVG01020432001 Vitis vinifera HOM05D005971 ORTHO05D007459 8.8e-10 70.5 89 43.8
Glyma.13G052600 Glycine max HOM05D005971 ORTHO05D007459 8.3e-08 63.9 102 38.2
Glyma.13G358300 Glycine max HOM05D005971 ORTHO05D007459 5.4e-07 61.2 141 30.5
CBR_g36330 Chara braunii HOM05D000019 ORTHO05D000048 7.7e-06 57.4 81 30.9


User provided reference genes

Program Settings