Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu051794.2 Olea europaea HOM05D003605 ORTHO05D004292 7.7e-107 390.6 209 100.0
Migut.H02387 Erythranthe guttata HOM05D003605 ORTHO05D004292 1.4e-52 210.3 195 66.2
MSTRG.23329 Avicennia marina HOM05D003605 ORTHO05D004292 2.4e-52 209.5 194 64.4
SGA_v2.0_scaffold34G13608 Striga asiatica HOM05D003605 ORTHO05D004292 9.2e-52 207.6 195 66.2
Oeu032173.1 Olea europaea HOM05D003605 ORTHO05D004292 1.7e-50 203.4 168 69.0
Nitab4.5_0000214g0060 Nicotiana tabacum HOM05D003605 ORTHO05D004292 1.1e-49 200.7 195 66.2
Rhsim08G0008800 Rhododendron simsii HOM05D003605 ORTHO05D004292 1.2e-48 197.2 186 66.7
Cc07_g15560 Coffea canephora HOM05D003605 ORTHO05D004292 1.6e-48 196.8 199 60.8
Nitab4.5_0004386g0030 Nicotiana tabacum HOM05D003605 ORTHO05D004292 2.1e-48 196.4 195 64.6
Dinv16312 Davidia involucrata HOM05D003605 ORTHO05D004292 8.1e-48 194.5 196 63.3
Solyc04g054710.3 Solanum lycopersicum HOM05D003605 ORTHO05D004292 8.1e-48 194.5 193 61.7
Peaxi162Scf00183g01421 Petunia axillaris HOM05D003605 ORTHO05D004292 1.1e-47 194.1 194 63.9
Sopen04g024460 Solanum pennellii HOM05D003605 ORTHO05D004292 1.4e-47 193.7 193 61.1
Hma1.2p1_0011F.1_g007160 Hydrangea macrophylla HOM05D003605 ORTHO05D004292 3.1e-47 192.6 197 62.4
PGSC0003DMG400027919 Solanum tuberosum HOM05D003605 ORTHO05D004292 1.5e-46 190.3 194 61.3
GSVIVG01008982001 Vitis vinifera HOM05D003605 ORTHO05D004292 1.5e-46 190.3 184 61.4
Duzib147G1273 Durio zibethinus HOM05D003605 ORTHO05D004292 4.4e-46 188.7 114 85.1
Thecc.01G106100 Theobroma cacao HOM05D003605 ORTHO05D004292 4.4e-46 188.7 193 60.6
vmacro18616 Vaccinium macrocarpon HOM05D003605 ORTHO05D004292 4.4e-46 188.7 181 63.5
CiPaw.03G138800 Carya illinoinensis HOM05D003605 ORTHO05D004292 1.7e-45 186.8 193 61.1
Gorai.007G241800 Gossypium raimondii HOM05D003605 ORTHO05D004292 1.7e-45 186.8 193 59.1
Atru.chr1.3714 Acer truncatum HOM05D003605 ORTHO05D004292 2.2e-45 186.4 114 82.5
Gohir.D13G027000 Gossypium hirsutum HOM05D003605 ORTHO05D004292 2.2e-45 186.4 114 83.3
Gorai.013G030300 Gossypium raimondii HOM05D003605 ORTHO05D004292 2.2e-45 186.4 193 59.6
GSVIVG01022163001 Vitis vinifera HOM05D003605 ORTHO05D004292 3.8e-45 185.7 167 66.5
Gohir.D11G224500 Gossypium hirsutum HOM05D003605 ORTHO05D004292 4.9e-45 185.3 193 58.5
TAR628G1078 Trochodendron aralioides HOM05D003605 ORTHO05D004292 4.9e-45 185.3 188 60.1
Ciclev10025279m.g Citrus clementina HOM05D003605 ORTHO05D004292 8.4e-45 184.5 181 61.9
Gohir.A13G028200 Gossypium hirsutum HOM05D003605 ORTHO05D004292 8.4e-45 184.5 193 59.6
Nn5g29013 Nelumbo nucifera HOM05D003605 ORTHO05D004292 8.4e-45 184.5 190 61.6
Prupe.6G179700 Prunus persica HOM05D003605 ORTHO05D004292 8.4e-45 184.5 114 81.6
Rhsim08G0008700 Rhododendron simsii HOM05D003605 ORTHO05D004292 8.4e-45 184.5 114 83.3
EL10Ac5g11501 Beta vulgaris HOM05D003605 ORTHO05D004292 1.1e-44 184.1 116 81.9
Duzib264G0977 Durio zibethinus HOM05D003605 ORTHO05D004292 1.1e-44 184.1 187 61.0
Hma1.2p1_0614F.1_g189540 Hydrangea macrophylla HOM05D003605 ORTHO05D004292 1.1e-44 184.1 96 94.8
Atru.chr4.227 Acer truncatum HOM05D003605 ORTHO05D004292 1.4e-44 183.7 179 62.0
CAN.G878.8 Capsicum annuum HOM05D003605 ORTHO05D004292 1.4e-44 183.7 192 61.5
Gohir.A11G199633 Gossypium hirsutum HOM05D003605 ORTHO05D004292 1.4e-44 183.7 192 57.8
Potri.007G088426 Populus trichocarpa HOM05D003605 ORTHO05D004292 1.4e-44 183.7 195 60.0
Sc04g0003290 Simmondsia chinensis HOM05D003605 ORTHO05D004292 1.4e-44 183.7 114 81.6
Sabra07G0072900 Salix brachista HOM05D003605 ORTHO05D004292 1.9e-44 183.3 197 61.4
DCAR_032171 Daucus carota HOM05D003605 ORTHO05D004292 2.4e-44 183.0 114 80.7
arahy.Tifrunner.gnm1.ann1.RRG4JE Arachis hypogaea HOM05D003605 ORTHO05D004292 4.2e-44 182.2 131 74.0
Cpa.g.sc20.227 Carica papaya HOM05D003605 ORTHO05D004292 4.2e-44 182.2 191 61.8
MD15G1329000 Malus domestica HOM05D003605 ORTHO05D004292 4.2e-44 182.2 114 80.7
CiPaw.04G096600 Carya illinoinensis HOM05D003605 ORTHO05D004292 7.1e-44 181.4 171 64.3
MD01G1024400 Malus domestica HOM05D003605 ORTHO05D004292 7.1e-44 181.4 114 78.9
Potri.005G079200 Populus trichocarpa HOM05D003605 ORTHO05D004292 7.1e-44 181.4 171 64.3
Rhsim04G0097000 Rhododendron simsii HOM05D003605 ORTHO05D004292 7.1e-44 181.4 114 81.6
RhsimUnG0163700 Rhododendron simsii HOM05D003605 ORTHO05D004292 7.1e-44 181.4 114 81.6
RhsimUnG0212800 Rhododendron simsii HOM05D003605 ORTHO05D004292 7.1e-44 181.4 114 81.6
TPR.G2157 Trifolium pratense HOM05D003605 ORTHO05D004292 7.1e-44 181.4 114 80.7
Ah.04g164730 Amaranthus hybridus HOM05D003605 ORTHO05D004292 9.2e-44 181.0 114 79.8
Manes.12G138300 Manihot esculenta HOM05D003605 ORTHO05D004292 9.2e-44 181.0 167 62.9
arahy.Tifrunner.gnm1.ann1.8A1TPW Arachis hypogaea HOM05D003605 ORTHO05D004292 1.2e-43 180.6 131 73.3
CANSAT01G2754 Cannabis sativa HOM05D003605 ORTHO05D004292 1.6e-43 180.3 162 64.8
ECA232G1065 Erigeron canadensis HOM05D003605 ORTHO05D004292 2.1e-43 179.9 114 79.8
Lj6g0022585 Lotus japonicus HOM05D003605 ORTHO05D004292 2.1e-43 179.9 114 78.9
Phvul.001G250600 Phaseolus vulgaris HOM05D003605 ORTHO05D004292 2.1e-43 179.9 114 78.1
Psat7g053000 Pisum sativum HOM05D003605 ORTHO05D004292 2.1e-43 179.9 114 79.8
Oeu053564.1 Olea europaea HOM05D003605 ORTHO05D004292 2.7e-43 179.5 114 81.6
ClCG07G009440 Citrullus lanatus HOM05D003605 ORTHO05D004292 3.5e-43 179.1 154 68.2
Lj4g0017562 Lotus japonicus HOM05D003605 ORTHO05D004292 4.6e-43 178.7 163 61.3
COL.COLO4_09912 Corchorus olitorius HOM05D003605 ORTHO05D004292 6.0e-43 178.3 193 58.5
VMungo0251G1785 Vigna mungo HOM05D003605 ORTHO05D004292 6.0e-43 178.3 149 67.1
AUR62029939 Chenopodium quinoa HOM05D003605 ORTHO05D004292 7.8e-43 177.9 114 78.9
Sabra05G0065200 Salix brachista HOM05D006521 ORTHO05D004292 7.8e-43 177.9 196 59.2
AUR62033748 Chenopodium quinoa HOM05D003605 ORTHO05D004292 1.0e-42 177.6 114 78.1
TAR376G0746 Trochodendron aralioides HOM05D003605 ORTHO05D004292 1.0e-42 177.6 170 62.4
Glyma.11G238300 Glycine max HOM05D003605 ORTHO05D004292 1.3e-42 177.2 114 78.1
HanXRQChr09g0260211 Helianthus annuus HOM05D003605 ORTHO05D004292 1.7e-42 176.8 194 57.2
QL02p032424 Quercus lobata HOM05D003605 ORTHO05D004292 1.7e-42 176.8 186 58.6
CSS0003079 Camellia sinensis var. sinensis HOM05D003605 ORTHO05D004292 3.0e-42 176.0 114 79.8
Lsat_1_v5_gn_4_141440 Lactuca sativa HOM05D003605 ORTHO05D004292 3.0e-42 176.0 177 60.5
TWI53G0811 Tripterygium wilfordii HOM05D003605 ORTHO05D004292 3.0e-42 176.0 172 61.0
HanXRQChr15g0484161 Helianthus annuus HOM05D003605 ORTHO05D004292 5.1e-42 175.3 175 59.4
Medtr8g091280 Medicago truncatula HOM05D003605 ORTHO05D004292 5.1e-42 175.3 161 62.7
Glyma.08G138800 Glycine max HOM05D003605 ORTHO05D004292 1.1e-41 174.1 150 66.7
Phvul.002G262100 Phaseolus vulgaris HOM05D003605 ORTHO05D004292 1.1e-41 174.1 149 65.8
TWI77G0071 Tripterygium wilfordii HOM05D003605 ORTHO05D004292 1.1e-41 174.1 182 58.8
Sed0024954 Sechium edule HOM05D003605 ORTHO05D004292 1.5e-41 173.7 161 64.0
Hund02342 Selenicereus undatus HOM05D003605 ORTHO05D004292 1.5e-41 173.7 183 58.5
CDE03G0458 Ceratophyllum demersum HOM05D003605 ORTHO05D004292 1.9e-41 173.3 169 59.2
VMungo1383G3703 Vigna mungo HOM05D003605 ORTHO05D004292 1.9e-41 173.3 114 75.4
HPP92_016106 Vanilla planifolia HOM05D003605 ORTHO05D004292 2.5e-41 172.9 114 76.3
ECA232G4497 Erigeron canadensis HOM05D003605 ORTHO05D004292 3.3e-41 172.6 99 83.8
PGR004G1268 Punica granatum HOM05D003605 ORTHO05D004292 3.3e-41 172.6 114 78.1
RcHm_v2.0_Chr2g0115381 Rosa chinensis HOM05D003605 ORTHO05D004292 3.3e-41 172.6 114 76.3
ATR0564G471 Amborella trichopoda HOM05D003605 ORTHO05D004292 4.3e-41 172.2 96 87.5
Migut.L00103 Erythranthe guttata HOM05D003605 ORTHO05D004292 4.3e-41 172.2 117 76.1
QL06p050316 Quercus lobata HOM05D003605 ORTHO05D004292 5.6e-41 171.8 114 76.3
FvH4_1g21500 Fragaria vesca HOM05D003605 ORTHO05D004292 7.3e-41 171.4 186 58.6
FAN19G1223 Fragaria x ananassa HOM05D003605 ORTHO05D004292 7.3e-41 171.4 186 58.6
Glyma.05G181000 Glycine max HOM05D003605 ORTHO05D004292 7.3e-41 171.4 150 65.3
Eucgr.I00463 Eucalyptus grandis HOM05D003605 ORTHO05D004292 1.3e-40 170.6 114 76.3
Glyma.11G238200 Glycine max HOM05D003605 ORTHO05D004292 1.3e-40 170.6 114 77.2
Medtr7g106830 Medicago truncatula HOM05D003605 ORTHO05D004292 1.6e-40 170.2 114 76.3
CsaV3_4G000360 Cucumis sativus L. HOM05D003605 ORTHO05D004292 2.1e-40 169.9 187 58.3
FAN26G2714 Fragaria x ananassa HOM05D003605 ORTHO05D004292 2.1e-40 169.9 181 59.7
Sed0022642 Sechium edule HOM05D003605 ORTHO05D004292 2.1e-40 169.9 144 63.9
Eucgr.I00395 Eucalyptus grandis HOM05D003605 ORTHO05D004292 3.6e-40 169.1 164 61.0
Lalb_Chr07g0185001 Lupinus albus HOM05D003605 ORTHO05D004292 3.6e-40 169.1 156 62.8
MELO3C017998.2 Cucumis melo HOM05D003605 ORTHO05D004292 4.8e-40 168.7 187 56.7
Os01g0871300 Oryza sativa ssp. japonica HOM05D003605 ORTHO05D004292 4.8e-40 168.7 114 76.3
CARHR113480 Cardamine hirsuta HOM05D003605 ORTHO05D004292 8.1e-40 167.9 160 58.8
VMungo1383G1191 Vigna mungo HOM05D003605 ORTHO05D004292 1.1e-39 167.5 114 75.4
Pp3c1_16910 Physcomitrium patens HOM05D003605 ORTHO05D004292 1.8e-39 166.8 122 70.5
Eucgr.I00398 Eucalyptus grandis HOM05D003605 ORTHO05D004292 3.1e-39 166.0 114 74.6
arahy.Tifrunner.gnm1.ann1.28TKL1 Arachis hypogaea HOM05D003605 ORTHO05D004292 4.0e-39 165.6 112 74.1
Phvul.001G250500 Phaseolus vulgaris HOM05D003605 ORTHO05D004292 4.0e-39 165.6 114 74.6
SEGI_19936 Sequoiadendron giganteum HOM05D003605 ORTHO05D004292 4.0e-39 165.6 111 71.2
arahy.Tifrunner.gnm1.ann1.7QDM7Z Arachis hypogaea HOM05D000001 ORTHO05D000003 5.3e-39 165.2 112 75.9
Zm00001eb146400 Zea mays HOM05D003605 ORTHO05D004292 1.2e-38 164.1 114 74.6
AT2G22250 Arabidopsis thaliana HOM05D003605 ORTHO05D004292 1.5e-38 163.7 149 61.7
THA.LOC104824869 Tarenaya hassleriana HOM05D003605 ORTHO05D004292 3.4e-38 162.5 114 73.7
CANSAT01G1177 Cannabis sativa HOM05D003605 ORTHO05D004292 7.6e-38 161.4 163 58.9
Zm00001eb348660 Zea mays HOM05D003605 ORTHO05D004292 1.3e-37 160.6 175 58.9
Carub.0004s0139 Capsella rubella HOM05D003605 ORTHO05D004292 1.7e-37 160.2 149 59.1
SMO351G0219 Selaginella moellendorffii HOM05D003605 ORTHO05D004292 1.7e-37 160.2 97 79.4
AL4G11730 Arabidopsis lyrata HOM05D003605 ORTHO05D004292 2.9e-37 159.5 151 60.9
SHI11587 Sapria himalayana HOM05D003605 ORTHO05D004292 3.8e-37 159.1 123 67.5
FAN23G2759 Fragaria x ananassa HOM05D003605 ORTHO05D004292 6.4e-37 158.3 211 51.7
Lsat_1_v5_gn_4_141381 Lactuca sativa HOM05D003605 ORTHO05D004292 6.4e-37 158.3 195 55.4
BcaC07g41087 Brassica carinata HOM05D003605 ORTHO05D004292 8.4e-37 157.9 166 56.0
CARHR231470 Cardamine hirsuta HOM05D003605 ORTHO05D004292 1.1e-36 157.5 96 81.2
Thhalv10000093m.g Eutrema salsugineum HOM05D003605 ORTHO05D004292 1.4e-36 157.1 156 60.3
BcaC02g08723 Brassica carinata HOM05D003605 ORTHO05D004292 1.9e-36 156.8 162 56.2
BcaC02g08676 Brassica carinata HOM05D003605 ORTHO05D004292 2.4e-36 156.4 189 51.9
AUR62006827 Chenopodium quinoa HOM05D003605 ORTHO05D004292 2.4e-36 156.4 114 70.2
Sp4g01300 Schrenkiella parvula HOM05D003605 ORTHO05D004292 3.2e-36 156.0 170 56.5
EL10Ac4g09572 Beta vulgaris HOM05D003605 ORTHO05D004292 9.3e-36 154.5 110 69.1
BcaB08g35052 Brassica carinata HOM05D003605 ORTHO05D004292 1.6e-35 153.7 177 54.8
BraA04t17309Z Brassica rapa HOM05D003605 ORTHO05D004292 1.6e-35 153.7 177 53.7
CBR_g81019 Chara braunii HOM05D003605 ORTHO05D004292 1.6e-35 153.7 122 65.6
Aa31LG7G14510 Aethionema arabicum HOM05D003605 ORTHO05D004292 2.1e-35 153.3 183 52.5
AUR62000485 Chenopodium quinoa HOM05D003605 ORTHO05D004292 2.3e-34 149.8 114 68.4
Cre02.g147302 Chlamydomonas reinhardtii HOM05D003605 ORTHO05D004292 3.0e-34 149.4 96 71.9
Lalb_Chr13g0296071 Lupinus albus HOM05D003605 ORTHO05D004292 1.1e-33 147.5 98 74.5
Mapoly0058s0104 Marchantia polymorpha HOM05D003605 ORTHO05D004292 1.6e-32 143.7 126 58.7
arahy.Tifrunner.gnm1.ann1.K33YLS Arachis hypogaea HOM05D003605 ORTHO05D004292 2.1e-32 143.3 103 71.8
PSO210G3598 Papaver somniferum HOM05D003605 ORTHO05D004292 6.9e-31 138.3 164 54.3
PSO447G0276 Papaver somniferum HOM05D003605 ORTHO05D004292 9.0e-31 137.9 164 54.3
MCO16G531 Micromonas commoda HOM05D003605 ORTHO05D004292 7.6e-30 134.8 112 57.1
PRCOL_00005023 Prasinoderma coloniale HOM05D003605 ORTHO05D004292 2.7e-27 126.3 114 57.9
CSS0002259 Camellia sinensis var. sinensis HOM05D003605 ORTHO05D004292 2.5e-25 119.8 96 68.8
Haze_27183 Corylus avellana HOM05D003605 ORTHO05D004292 6.0e-19 98.6 99 51.5
AagrBONN_evm.TU.Sc2ySwM_344.2348 Anthoceros agrestis HOM05D003605 ORTHO05D004292 1.0e-18 97.8 157 43.3
HanXRQChr09g0260221 Helianthus annuus HOM05D024719 ORTHO05D004292 8.7e-18 94.7 78 64.1
CAN.G827.3 Capsicum annuum HOM05D003605 ORTHO05D004292 4.8e-16 89.0 91 53.8
Medtr1807s0010 Medicago truncatula HOM05D003605 ORTHO05D004292 6.2e-16 88.6 99 45.5
arahy.Tifrunner.gnm1.ann1.21PEZK Arachis hypogaea HOM05D003605 ORTHO05D004292 2.9e-13 79.7 67 65.7
MCO02G005 Micromonas commoda HOM05D003605 ORTHO05D004292 7.9e-11 71.6 98 35.7
RcHm_v2.0_Chr5g0037501 Rosa chinensis HOM05D003605 ORTHO05D004292 1.8e-10 70.5 58 65.5
GSVIVG01015252001 Vitis vinifera HOM05D003605 ORTHO05D004292 3.9e-10 69.3 86 50.0
PRCOL_00004854 Prasinoderma coloniale HOM05D003605 ORTHO05D004292 8.7e-10 68.2 102 37.3
Cc10_g10990 Coffea canephora HOM05D002771 ORTHO05D003078 5.7e-09 65.5 86 34.9
AL2G37870 Arabidopsis lyrata HOM05D002771 ORTHO05D003078 2.2e-08 63.5 123 31.7
Thhalv10018556m.g Eutrema salsugineum HOM05D002771 ORTHO05D003078 2.2e-08 63.5 156 32.1
DCAR_017393 Daucus carota HOM05D002771 ORTHO05D003078 2.8e-08 63.2 86 33.7
AT1G77670 Arabidopsis thaliana HOM05D002771 ORTHO05D003078 6.3e-08 62.0 148 31.1
Pp3s32_480 Physcomitrium patens HOM05D003605 ORTHO05D309393 8.2e-08 61.6 151 31.8
BcaB02g07124 Brassica carinata HOM05D002771 ORTHO05D003078 1.1e-07 61.2 127 36.2
BcaC08g45463 Brassica carinata HOM05D002771 ORTHO05D003078 1.5e-06 57.4 161 30.4
A07p27900 Brassica napus HOM05D002771 ORTHO05D003078 2.0e-06 57.0 140 31.4
C06p30900 Brassica napus HOM05D002771 ORTHO05D003078 1.0e-05 54.7 172 26.7
BolC6t38252H Brassica oleracea HOM05D002771 ORTHO05D003078 1.0e-05 54.7 172 26.7
CDE06G1056 Ceratophyllum demersum HOM05D002771 ORTHO05D003078 1.0e-05 54.7 114 33.3


User provided reference genes

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