Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu051690.1 Olea europaea HOM05D005260 ORTHO05D006390 1.5e-200 702.6 353 100.0
Oeu050475.1 Olea europaea HOM05D005260 ORTHO05D006390 2.6e-171 605.5 357 86.6
SGA_v2.0_scaffold265G46122 Striga asiatica HOM05D005260 ORTHO05D006390 1.0e-143 513.8 351 75.2
MSTRG.6120 Avicennia marina HOM05D005260 ORTHO05D006390 3.0e-143 512.3 360 73.3
Migut.J01331 Erythranthe guttata HOM05D005260 ORTHO05D006390 4.9e-138 495.0 353 71.7
SalBow1G8640 Salvia bowleyana HOM05D005260 ORTHO05D006390 6.4e-130 468.0 353 67.4
Peaxi162Scf00347g00088 Petunia axillaris HOM05D005260 ORTHO05D006390 1.9e-126 456.4 398 63.8
Nitab4.5_0008157g0020 Nicotiana tabacum HOM05D005260 ORTHO05D006390 9.6e-126 454.1 393 64.4
Hma1.2p1_0028F.1_g017400 Hydrangea macrophylla HOM05D005260 ORTHO05D006390 2.8e-125 452.6 393 64.9
CSS0012073 Camellia sinensis var. sinensis HOM05D005260 ORTHO05D006390 1.4e-124 450.3 393 64.6
Cc06_g15200 Coffea canephora HOM05D005260 ORTHO05D006390 2.4e-124 449.5 378 66.1
Sopen07g001450 Solanum pennellii HOM05D005260 ORTHO05D006390 1.5e-123 446.8 392 64.0
Solyc07g005340.2 Solanum lycopersicum HOM05D005260 ORTHO05D006390 2.0e-123 446.4 392 64.0
PGSC0003DMG400003180 Solanum tuberosum HOM05D005260 ORTHO05D006390 4.4e-123 445.3 392 64.5
CAN.G1116.9 Capsicum annuum HOM05D005260 ORTHO05D006390 5.8e-123 444.9 398 62.6
Nitab4.5_0001201g0060 Nicotiana tabacum HOM05D005260 ORTHO05D006390 2.9e-122 442.6 381 64.6
Cfa020845 Carpinus fangiana HOM05D005260 ORTHO05D006390 1.9e-121 439.9 374 65.8
Haze_19232 Corylus avellana HOM05D005260 ORTHO05D006390 6.0e-120 434.9 374 65.2
RhsimUnG0040000 Rhododendron simsii HOM05D005260 ORTHO05D006390 6.0e-120 434.9 363 65.3
QL02p092738 Quercus lobata HOM05D005260 ORTHO05D006390 1.3e-119 433.7 381 64.8
Lsat_1_v5_gn_6_38260 Lactuca sativa HOM05D005260 ORTHO05D006390 1.5e-118 430.3 379 63.3
Potri.018G109800 Populus trichocarpa HOM05D005260 ORTHO05D006390 2.5e-118 429.5 377 63.1
Rhsim01G0035700 Rhododendron simsii HOM05D005260 ORTHO05D006390 5.6e-118 428.3 386 62.4
Rhsim01G0045600 Rhododendron simsii HOM05D005260 ORTHO05D006390 1.3e-117 427.2 393 61.8
SGA_v2.0_scaffold45G17044 Striga asiatica HOM05D005260 ORTHO05D006390 8.1e-117 424.5 351 63.2
Rhsim01G0036000 Rhododendron simsii HOM05D005260 ORTHO05D006390 1.1e-116 424.1 393 61.6
TAR625G1225 Trochodendron aralioides HOM05D005260 ORTHO05D006390 1.8e-116 423.3 378 63.0
Ciclev10008691m.g Citrus clementina HOM05D005260 ORTHO05D006390 2.4e-116 422.9 375 62.4
CiPaw.15G174600 Carya illinoinensis HOM05D005260 ORTHO05D006390 6.9e-116 421.4 378 62.7
PGR102G1636 Punica granatum HOM05D005260 ORTHO05D006390 1.2e-115 420.6 356 63.2
FAN19G1826 Fragaria x ananassa HOM05D005260 ORTHO05D006390 7.6e-115 417.9 383 62.7
Sabra06G0142800 Salix brachista HOM05D005260 ORTHO05D006390 1.3e-114 417.2 351 63.8
FAN23G1120 Fragaria x ananassa HOM05D005260 ORTHO05D006390 2.9e-114 416.0 384 62.5
Potri.006G186900 Populus trichocarpa HOM05D005260 ORTHO05D006390 8.4e-114 414.5 377 62.1
Ca_21113_v3 Cicer arietinum L. HOM05D005260 ORTHO05D006390 1.9e-113 413.3 376 62.2
TAR383G0874 Trochodendron aralioides HOM05D005260 ORTHO05D006390 4.2e-113 412.1 383 60.1
RcHm_v2.0_Chr2g0085941 Rosa chinensis HOM05D005260 ORTHO05D006390 5.4e-113 411.8 390 61.0
Sabra06G0141800 Salix brachista HOM05D005260 ORTHO05D006390 5.4e-113 411.8 352 63.4
Eucgr.C02595 Eucalyptus grandis HOM05D005260 ORTHO05D006390 7.1e-113 411.4 377 59.7
Prupe.7G260500 Prunus persica HOM05D005260 ORTHO05D006390 9.3e-113 411.0 384 60.7
FAN26G1108 Fragaria x ananassa HOM05D005260 ORTHO05D006390 3.5e-112 409.1 380 61.8
Sabra18G0092700 Salix brachista HOM05D005260 ORTHO05D006390 6.0e-112 408.3 380 60.8
Manes.14G111500 Manihot esculenta HOM05D005260 ORTHO05D006390 7.9e-112 407.9 382 61.3
Psat4g008640 Pisum sativum HOM05D005260 ORTHO05D006390 1.0e-111 407.5 379 61.7
Lalb_Chr13g0300941 Lupinus albus HOM05D005260 ORTHO05D006390 1.3e-111 407.1 377 60.5
TWI34G1822 Tripterygium wilfordii HOM05D005260 ORTHO05D006390 1.8e-111 406.8 385 58.7
FAN28G1391 Fragaria x ananassa HOM05D005260 ORTHO05D006390 2.3e-111 406.4 380 61.8
Duzib150G0891 Durio zibethinus HOM05D005260 ORTHO05D006390 3.0e-111 406.0 360 62.5
TPR.G9269 Trifolium pratense HOM05D005260 ORTHO05D006390 8.7e-111 404.4 372 61.0
Thecc.09G033300 Theobroma cacao HOM05D005260 ORTHO05D006390 2.5e-110 402.9 356 61.8
MELO3C010238.2 Cucumis melo HOM05D005260 ORTHO05D006390 3.3e-110 402.5 384 59.6
Glyma.02G202400 Glycine max HOM05D005260 ORTHO05D006390 4.3e-110 402.1 378 60.3
Glyma.17G075400 Glycine max HOM05D005260 ORTHO05D006390 4.3e-110 402.1 380 61.1
Lj4g0015138 Lotus japonicus HOM05D005260 ORTHO05D006390 4.3e-110 402.1 357 61.3
MD15G1155100 Malus domestica HOM05D005260 ORTHO05D006390 5.6e-110 401.7 383 61.1
Gohir.A13G184700 Gossypium hirsutum HOM05D005260 ORTHO05D006390 9.6e-110 401.0 345 63.5
Phvul.003G157300 Phaseolus vulgaris HOM05D005260 ORTHO05D006390 9.6e-110 401.0 375 59.2
Duzib168G1964 Durio zibethinus HOM05D005260 ORTHO05D006390 1.3e-109 400.6 356 62.6
HanXRQChr13g0397631 Helianthus annuus HOM05D005260 ORTHO05D006390 1.3e-109 400.6 386 59.1
Gohir.D13G191100 Gossypium hirsutum HOM05D005260 ORTHO05D006390 2.1e-109 399.8 345 63.2
Gorai.013G217000 Gossypium raimondii HOM05D005260 ORTHO05D006390 2.1e-109 399.8 345 63.2
Sc18g0000130 Simmondsia chinensis HOM05D005260 ORTHO05D006390 2.8e-109 399.4 393 59.5
FvH4_1g01150 Fragaria vesca HOM05D005260 ORTHO05D006390 4.8e-109 398.7 386 60.6
Atru.chr6.1391 Acer truncatum HOM05D005260 ORTHO05D006390 1.1e-108 397.5 365 61.1
Atru.chr7.58 Acer truncatum HOM05D005260 ORTHO05D006390 9.0e-108 394.4 365 60.8
CsaV3_1G028770 Cucumis sativus L. HOM05D005260 ORTHO05D006390 9.0e-108 394.4 384 58.3
Actinidia04287 Actinidia chinensis HOM05D005260 ORTHO05D006390 8.4e-106 387.9 381 57.7
Gorai.006G273400 Gossypium raimondii HOM05D005260 ORTHO05D006390 7.1e-105 384.8 330 63.0
Medtr4g131190 Medicago truncatula HOM05D005260 ORTHO05D006390 7.1e-105 384.8 363 60.6
ClCG06G015480 Citrullus lanatus HOM05D005260 ORTHO05D006390 9.3e-105 384.4 382 57.6
Lj7P455T24 Lonicera japonica HOM05D005260 ORTHO05D006390 3.5e-104 382.5 311 65.9
Cpa.g.sc46.130 Carica papaya HOM05D005260 ORTHO05D006390 3.0e-103 379.4 359 60.7
GSVIVG01023592001 Vitis vinifera HOM05D005260 ORTHO05D006390 4.3e-102 375.6 351 62.7
ATR0739G050 Amborella trichopoda HOM05D005260 ORTHO05D006390 2.8e-101 372.9 393 56.2
Sed0012515 Sechium edule HOM05D005260 ORTHO05D006390 3.7e-101 372.5 389 55.3
VMungo1215G1942 Vigna mungo HOM05D005260 ORTHO05D006390 1.1e-100 370.9 369 57.2
PSO170G6608 Papaver somniferum HOM05D005260 ORTHO05D006390 3.1e-100 369.4 398 54.5
ECA233G0390 Erigeron canadensis HOM05D005260 ORTHO05D006390 4.0e-100 369.0 342 61.4
AT5G58020 Arabidopsis thaliana HOM05D005260 ORTHO05D006390 6.9e-100 368.2 359 58.2
Thhalv10013961m.g Eutrema salsugineum HOM05D005260 ORTHO05D006390 1.2e-99 367.5 356 58.7
Ah.11g045050 Amaranthus hybridus HOM05D005260 ORTHO05D006390 1.5e-99 367.1 375 57.3
SHI04751 Sapria himalayana HOM05D005260 ORTHO05D006390 2.0e-99 366.7 367 55.9
BolC2t07483H Brassica oleracea HOM05D005260 ORTHO05D006390 4.5e-99 365.5 341 60.1
AL8G34120 Arabidopsis lyrata HOM05D005260 ORTHO05D006390 1.3e-98 364.0 356 58.1
BcaB05g22395 Brassica carinata HOM05D005260 ORTHO05D006390 1.3e-98 364.0 345 58.8
COL.COLO4_18779 Corchorus olitorius HOM05D005260 ORTHO05D006390 2.2e-98 363.2 349 60.2
Sp6g19700 Schrenkiella parvula HOM05D005260 ORTHO05D006390 2.2e-98 363.2 356 57.6
A02p08050 Brassica napus HOM05D005260 ORTHO05D006390 2.9e-98 362.8 326 62.0
PSO017G5909 Papaver somniferum HOM05D005260 ORTHO05D006390 4.9e-98 362.1 398 53.8
BraA02t05877Z Brassica rapa HOM05D005260 ORTHO05D006390 6.5e-98 361.7 326 62.0
CARHR271830 Cardamine hirsuta HOM05D005260 ORTHO05D006390 1.1e-97 360.9 356 58.1
THA.LOC104817828 Tarenaya hassleriana HOM05D005260 ORTHO05D006390 1.9e-97 360.1 361 57.1
BraA10t43614Z Brassica rapa HOM05D005260 ORTHO05D006390 1.6e-96 357.1 306 63.1
BcaC04g19916 Brassica carinata HOM05D005260 ORTHO05D006390 2.1e-96 356.7 357 58.3
C09p49880 Brassica napus HOM05D005260 ORTHO05D006390 2.1e-96 356.7 357 58.3
Carub.0008s1857 Capsella rubella HOM05D005260 ORTHO05D006390 3.5e-96 355.9 357 57.7
A10p16150 Brassica napus HOM05D005260 ORTHO05D006390 6.0e-96 355.1 307 63.2
BolC9t57839H Brassica oleracea HOM05D005260 ORTHO05D006390 7.9e-96 354.8 354 58.8
C02p13690 Brassica napus HOM05D005260 ORTHO05D006390 1.0e-95 354.4 326 61.3
THA.LOC104817826 Tarenaya hassleriana HOM05D005260 ORTHO05D006390 3.9e-95 352.4 357 55.7
Aqoxy3G00834 Aquilegia oxysepala HOM05D005260 ORTHO05D006390 6.7e-95 351.7 358 57.8
Aa31LG3G13860 Aethionema arabicum HOM05D005260 ORTHO05D006390 7.4e-94 348.2 355 56.3
Os06g0183900 Oryza sativa ssp. japonica HOM05D005260 ORTHO05D006390 2.0e-91 340.1 355 55.2
MBI14_g37102_MAGBIO Magnolia biondii HOM05D005260 ORTHO05D006390 4.5e-91 339.0 397 51.4
EL10Ac8g18850 Beta vulgaris HOM05D005260 ORTHO05D006390 1.1e-89 334.3 389 51.7
DCAR_020883 Daucus carota HOM05D005260 ORTHO05D006390 7.2e-89 331.6 277 66.4
Dinv42879 Davidia involucrata HOM05D005260 ORTHO05D006390 3.0e-87 326.2 342 56.1
Dinv43221 Davidia involucrata HOM05D005260 ORTHO05D006390 3.0e-87 326.2 342 56.1
SEGI_13576 Sequoiadendron giganteum HOM05D005260 ORTHO05D006390 6.3e-85 318.5 380 48.7
Pp3c14_10930 Physcomitrium patens HOM05D005260 ORTHO05D006390 5.3e-84 315.5 334 53.3
SMO307G0072 Selaginella moellendorffii HOM05D005260 ORTHO05D006390 1.6e-80 303.9 297 55.9
AagrBONN_evm.TU.Sc2ySwM_228.4055 Anthoceros agrestis HOM05D005260 ORTHO05D006390 5.1e-79 298.9 292 55.5
Gohir.D09G249000 Gossypium hirsutum HOM05D005260 ORTHO05D006390 5.7e-78 295.4 264 61.7
Mapoly0043s0023 Marchantia polymorpha HOM05D005260 ORTHO05D006390 8.2e-77 291.6 398 44.7
CiPaw.16G114800 Carya illinoinensis HOM05D005260 ORTHO05D006390 1.2e-75 287.7 275 59.3
AUR62031434 Chenopodium quinoa HOM05D005260 ORTHO05D006390 1.2e-75 287.7 312 52.2
AUR62021106 Chenopodium quinoa HOM05D005260 ORTHO05D006390 7.0e-68 261.9 240 56.2
Actinidia38337 Actinidia chinensis HOM05D005260 ORTHO05D006390 2.7e-64 250.0 166 72.3
Gohir.D07G030400 Gossypium hirsutum HOM05D005260 ORTHO05D006390 8.0e-64 248.4 261 55.9
Gorai.001G031600 Gossypium raimondii HOM05D005260 ORTHO05D006390 1.8e-63 247.3 261 55.6
CBR_g44540 Chara braunii HOM05D005260 ORTHO05D006390 2.6e-62 243.4 381 41.5
unitig_0.g2819 Utricularia gibba HOM05D005260 ORTHO05D006390 1.4e-60 237.7 192 66.1
HPP92_018747 Vanilla planifolia HOM05D005260 ORTHO05D006390 6.8e-47 192.2 182 62.1
Lalb_Chr12g0198621 Lupinus albus HOM05D005260 ORTHO05D006390 1.8e-44 184.1 188 56.9
CDE02G0414 Ceratophyllum demersum HOM05D005260 ORTHO05D006390 4.4e-38 162.9 365 37.0
Cre03.g150650 Chlamydomonas reinhardtii HOM05D005260 ORTHO05D006390 9.2e-36 155.2 312 34.6
AagrBONN_evm.TU.Sc2ySwM_344.4069 Anthoceros agrestis HOM05D005260 ORTHO05D006390 8.0e-32 142.1 162 53.7
PRCOL_00003864 Prasinoderma coloniale HOM05D005260 ORTHO05D006390 3.7e-29 133.3 185 42.2
HPP92_018748 Vanilla planifolia HOM05D005260 ORTHO05D006390 3.2e-28 130.2 133 50.4
HanXRQChr09g0262911 Helianthus annuus HOM05D005260 ORTHO05D006390 4.1e-28 129.8 79 78.5
Atru.chr13.1961 Acer truncatum HOM05D005260 ORTHO05D006390 1.6e-27 127.9 144 55.6
TAR625G0635 Trochodendron aralioides HOM05D005260 ORTHO05D006390 3.6e-24 116.7 139 57.6
MELO3C004727.2 Cucumis melo HOM05D005260 ORTHO05D006390 5.8e-22 109.4 90 58.9
ATR0579G027 Amborella trichopoda HOM05D005260 ORTHO05D006390 7.8e-19 99.0 120 47.5
Zm00001eb158280 Zea mays HOM05D005260 ORTHO05D006390 1.4e-15 88.2 65 61.5
BolC3t13905H Brassica oleracea HOM05D005260 ORTHO05D006390 1.0e-10 72.0 51 72.5
unitig_0.g2818 Utricularia gibba HOM05D002170 ORTHO05D005003 1.7e-10 71.2 74 51.4
ClCG06G012260 Citrullus lanatus HOM05D005260 ORTHO05D006390 5.1e-10 69.7 58 60.3
MCO05G557 Micromonas commoda HOM05D005260 ORTHO05D006390 5.1e-10 69.7 244 25.4
unitig_747.g21900 Utricularia gibba HOM05D005260 ORTHO05D006390 1.9e-09 67.8 77 51.9
Cfa026666 Carpinus fangiana HOM05D005260 ORTHO05D006390 2.8e-08 63.9 275 26.5
CiPaw.12G098000 Carya illinoinensis HOM05D003547 ORTHO05D004236 8.1e-08 62.4 41 68.3
Cre17.g715950 Chlamydomonas reinhardtii HOM05D005260 ORTHO05D006390 3.1e-07 60.5 170 28.8
CBR_g37538 Chara braunii HOM05D005260 ORTHO05D006390 1.5e-06 58.2 98 32.7
Gorai.011G083100 Gossypium raimondii HOM05D005260 ORTHO05D006390 4.4e-06 56.6 78 48.7


User provided reference genes

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