Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu051650.1 Olea europaea HOM05D000606 ORTHO05D018733 1.4e-23 112.1 55 100.0
SGA_v2.0_scaffold192G40635 Striga asiatica HOM05D000606 ORTHO05D002249 1.8e-10 68.6 45 71.1
MSTRG.26450 Avicennia marina HOM05D000606 ORTHO05D002249 5.1e-10 67.0 47 68.1
Cc06_g11750 Coffea canephora HOM05D000606 ORTHO05D002249 5.7e-09 63.5 42 66.7
Nitab4.5_0002824g0020 Nicotiana tabacum HOM05D000606 ORTHO05D002249 5.7e-09 63.5 42 69.0
Nitab4.5_0002642g0020 Nicotiana tabacum HOM05D000606 ORTHO05D002249 7.4e-09 63.2 42 71.4
QL02p061836 Quercus lobata HOM05D000606 ORTHO05D002249 7.4e-09 63.2 44 68.2
Migut.L01528 Erythranthe guttata HOM05D000606 ORTHO05D002249 9.7e-09 62.8 47 61.7
SalBow6G2770 Salvia bowleyana HOM05D000606 ORTHO05D002249 1.6e-08 62.0 45 64.4
unitig_8.g4688 Utricularia gibba HOM05D000606 ORTHO05D018733 1.6e-08 62.0 47 59.6
TAR626G1319 Trochodendron aralioides HOM05D000606 ORTHO05D002249 2.2e-08 61.6 45 64.4
TAR626G1448 Trochodendron aralioides HOM05D000606 ORTHO05D002249 2.2e-08 61.6 45 64.4
CAN.G1583.10 Capsicum annuum HOM05D000606 ORTHO05D002249 2.8e-08 61.2 42 69.0
CAN.G2430.1 Capsicum annuum HOM05D000606 ORTHO05D002249 2.8e-08 61.2 42 69.0
ClCG03G015350 Citrullus lanatus HOM05D000606 ORTHO05D002249 2.8e-08 61.2 44 63.6
Dinv42349 Davidia involucrata HOM05D000606 ORTHO05D002249 2.8e-08 61.2 44 61.4
Nitab4.5_0001519g0180 Nicotiana tabacum HOM05D000606 ORTHO05D002249 3.7e-08 60.8 42 66.7
Nitab4.5_0002079g0030 Nicotiana tabacum HOM05D000606 ORTHO05D002249 4.8e-08 60.5 42 66.7
PGSC0003DMG400000273 Solanum tuberosum HOM05D000606 ORTHO05D002249 4.8e-08 60.5 42 69.0
SGA_v2.0_scaffold23G10045 Striga asiatica HOM05D000606 ORTHO05D002249 6.3e-08 60.1 45 66.7
Actinidia25233 Actinidia chinensis HOM05D000606 ORTHO05D002249 1.1e-07 59.3 39 66.7
Actinidia39699 Actinidia chinensis HOM05D000606 ORTHO05D002249 1.1e-07 59.3 39 66.7
Hma1.2p1_0672F.1_g200940 Hydrangea macrophylla HOM05D000606 ORTHO05D002249 1.1e-07 59.3 44 61.4
Solyc12g009020.2 Solanum lycopersicum HOM05D000606 ORTHO05D002249 1.1e-07 59.3 42 66.7
Sopen12g003950 Solanum pennellii HOM05D000606 ORTHO05D002249 1.1e-07 59.3 42 66.7
Glyma.13G106900 Glycine max HOM05D000606 ORTHO05D002249 2.4e-07 58.2 44 52.3
Glyma.17G052400 Glycine max HOM05D000606 ORTHO05D002249 2.4e-07 58.2 44 52.3
Sed0025582 Sechium edule HOM05D000606 ORTHO05D002249 2.4e-07 58.2 44 59.1
Rhsim05G0014500 Rhododendron simsii HOM05D000606 ORTHO05D002249 3.1e-07 57.8 39 66.7
Eucgr.C00849 Eucalyptus grandis HOM05D000606 ORTHO05D002249 4.1e-07 57.4 44 59.1
HanXRQChr12g0354521 Helianthus annuus HOM05D000606 ORTHO05D002249 4.1e-07 57.4 39 64.1
CSS0013235 Camellia sinensis var. sinensis HOM05D000606 ORTHO05D002249 5.3e-07 57.0 37 70.3
ECA234G0695 Erigeron canadensis HOM05D000606 ORTHO05D002249 5.3e-07 57.0 42 61.9
Manes.03G037000 Manihot esculenta HOM05D000606 ORTHO05D002249 5.3e-07 57.0 44 56.8
Sed0006236 Sechium edule HOM05D000606 ORTHO05D002249 5.3e-07 57.0 47 55.3
unitig_85.g27255 Utricularia gibba HOM05D000606 ORTHO05D002249 5.3e-07 57.0 44 56.8
Cfa003048 Carpinus fangiana HOM05D000606 ORTHO05D002249 6.9e-07 56.6 44 59.1
CiPaw.04G147300 Carya illinoinensis HOM05D000606 ORTHO05D002249 6.9e-07 56.6 44 56.8
MELO3C015497.2 Cucumis melo HOM05D000606 ORTHO05D002249 6.9e-07 56.6 44 59.1
CsaV3_1G040690 Cucumis sativus L. HOM05D000606 ORTHO05D002249 6.9e-07 56.6 44 59.1
Peaxi162Scf00498g00534 Petunia axillaris HOM05D000606 ORTHO05D002249 6.9e-07 56.6 41 63.4
RcHm_v2.0_Chr2g0094061 Rosa chinensis HOM05D000606 ORTHO05D002249 6.9e-07 56.6 44 56.8
arahy.Tifrunner.gnm1.ann1.CNS53F Arachis hypogaea HOM05D000606 ORTHO05D002249 9.0e-07 56.2 43 53.5
MELO3C004635.2 Cucumis melo HOM05D000606 ORTHO05D002249 9.0e-07 56.2 47 55.3
CsaV3_2G001350 Cucumis sativus L. HOM05D000606 ORTHO05D002249 9.0e-07 56.2 47 55.3
PGR142G0336 Punica granatum HOM05D000606 ORTHO05D002249 9.0e-07 56.2 44 56.8
FvH4_1g08020 Fragaria vesca HOM05D000606 ORTHO05D002249 1.2e-06 55.8 44 54.5
FAN19G0699 Fragaria x ananassa HOM05D000606 ORTHO05D002249 1.2e-06 55.8 44 54.5
FAN26G1651 Fragaria x ananassa HOM05D000606 ORTHO05D002249 1.2e-06 55.8 44 54.5
FAN26G2279 Fragaria x ananassa HOM05D000606 ORTHO05D002249 1.2e-06 55.8 44 54.5
FAN28G1541 Fragaria x ananassa HOM05D000606 ORTHO05D002249 1.2e-06 55.8 44 54.5
Migut.J00561 Erythranthe guttata HOM05D000606 ORTHO05D002249 1.5e-06 55.5 47 55.3
TWI32G0436 Tripterygium wilfordii HOM05D000606 ORTHO05D002249 1.5e-06 55.5 44 54.5
GSVIVG01001713001 Vitis vinifera HOM05D000606 ORTHO05D018733 1.5e-06 55.5 44 52.3
GSVIVG01015155001 Vitis vinifera HOM05D000606 ORTHO05D002249 1.5e-06 55.5 44 52.3
arahy.Tifrunner.gnm1.ann1.84JEJ8 Arachis hypogaea HOM05D000606 ORTHO05D002249 2.0e-06 55.1 44 52.3
arahy.Tifrunner.gnm1.ann1.8S1XGC Arachis hypogaea HOM05D000606 ORTHO05D002249 2.0e-06 55.1 44 52.3
MD15G1212100 Malus domestica HOM05D000606 ORTHO05D002249 2.0e-06 55.1 44 54.5
PSO210G5580 Papaver somniferum HOM05D000606 ORTHO05D002249 2.0e-06 55.1 44 56.8
PSO210G7333 Papaver somniferum HOM05D000606 ORTHO05D002249 2.0e-06 55.1 44 56.8
Ah.14g085020 Amaranthus hybridus HOM05D000606 ORTHO05D002249 2.6e-06 54.7 47 55.3
arahy.Tifrunner.gnm1.ann1.KNR1MN Arachis hypogaea HOM05D000606 ORTHO05D002249 2.6e-06 54.7 47 48.9
Cpa.g.sc371.4 Carica papaya HOM05D000606 ORTHO05D002249 2.6e-06 54.7 48 54.2
HanXRQChr10g0319531 Helianthus annuus HOM05D000606 ORTHO05D002249 2.6e-06 54.7 39 61.5
BcaC09g51759 Brassica carinata HOM05D000606 ORTHO05D002249 3.4e-06 54.3 49 53.1
CiPaw.03G211300 Carya illinoinensis HOM05D000606 ORTHO05D002249 3.4e-06 54.3 44 59.1
Lalb_Chr12g0199941 Lupinus albus HOM05D000606 ORTHO05D002249 3.4e-06 54.3 44 52.3
Potri.006G146500 Populus trichocarpa HOM05D000606 ORTHO05D002249 3.4e-06 54.3 44 54.5
Sc14g0000630 Simmondsia chinensis HOM05D000606 ORTHO05D002249 3.4e-06 54.3 44 54.5
DCAR_028280 Daucus carota HOM05D000606 ORTHO05D002249 4.5e-06 53.9 44 54.5
Lalb_Chr08g0232441 Lupinus albus HOM05D000606 ORTHO05D002249 4.5e-06 53.9 47 48.9
Sed0020907 Sechium edule HOM05D000606 ORTHO05D002249 4.5e-06 53.9 47 53.2
Thecc.09G083200 Theobroma cacao HOM05D000606 ORTHO05D002249 4.5e-06 53.9 44 50.0
Thecc.09G083300 Theobroma cacao HOM05D000101 ORTHO05D002249 4.5e-06 53.9 44 50.0
Duzib150G0785 Durio zibethinus HOM05D000606 ORTHO05D002249 5.9e-06 53.5 44 50.0
Thhalv10025531m.g Eutrema salsugineum HOM05D000606 ORTHO05D002249 5.9e-06 53.5 49 53.1
FAN23G1803 Fragaria x ananassa HOM05D000606 ORTHO05D002249 5.9e-06 53.5 44 52.3
TAR636G0423 Trochodendron aralioides HOM05D000606 ORTHO05D002249 5.9e-06 53.5 44 54.5
Lj4g0011656 Lotus japonicus HOM05D000606 ORTHO05D002249 7.7e-06 53.1 44 52.3
MD02G1084700 Malus domestica HOM05D000606 ORTHO05D002249 7.7e-06 53.1 44 54.5
vmacro17164 Vaccinium macrocarpon HOM05D000606 ORTHO05D002249 7.7e-06 53.1 39 59.0
Ciclev10008579m.g Citrus clementina HOM05D000606 ORTHO05D002249 1.0e-05 52.8 44 52.3
Sabra18G0047400 Salix brachista HOM05D000606 ORTHO05D002249 1.0e-05 52.8 44 52.3


User provided reference genes

Program Settings