Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu051604.1 Olea europaea HOM05D004765 ORTHO05D005900 0.0e+00 1240.3 709 100.0
Migut.N02474 Erythranthe guttata HOM05D004765 ORTHO05D005900 1.3e-246 856.7 566 77.7
MSTRG.18770 Avicennia marina HOM05D004765 ORTHO05D005900 1.7e-246 856.3 561 78.8
Dinv22819 Davidia involucrata HOM05D004765 ORTHO05D005900 5.4e-237 824.7 555 76.4
Cc01_g08830 Coffea canephora HOM05D004765 ORTHO05D005900 5.1e-235 818.1 574 74.2
Dinv08934 Davidia involucrata HOM05D004765 ORTHO05D005900 6.6e-235 817.8 557 75.8
CSS0013873 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 4.3e-234 815.1 548 76.6
CSS0028820 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 7.3e-234 814.3 548 76.6
Actinidia07259 Actinidia chinensis HOM05D004765 ORTHO05D005900 9.5e-234 813.9 554 75.1
vmacro14340 Vaccinium macrocarpon HOM05D004765 ORTHO05D005900 3.6e-233 812.0 553 75.6
Prupe.6G135800 Prunus persica HOM05D004765 ORTHO05D005900 4.7e-233 811.6 548 76.3
Ciclev10028115m.g Citrus clementina HOM05D004765 ORTHO05D005900 8.1e-233 810.8 554 75.5
SGA_v2.0_scaffold295G47508 Striga asiatica HOM05D004765 ORTHO05D005900 8.1e-233 810.8 585 71.5
Peaxi162Scf00345g01023 Petunia axillaris HOM05D004765 ORTHO05D005900 1.1e-232 810.4 572 75.2
CSS0015967 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 4.0e-232 808.5 564 74.6
GSVIVG01036081001 Vitis vinifera HOM05D004765 ORTHO05D005900 6.8e-232 807.7 555 74.8
Actinidia24229 Actinidia chinensis HOM05D004765 ORTHO05D005900 8.9e-232 807.4 555 75.0
CiPaw.14G098100 Carya illinoinensis HOM05D004765 ORTHO05D005900 1.2e-231 807.0 550 74.5
Manes.11G164300 Manihot esculenta HOM05D004765 ORTHO05D005900 1.5e-231 806.6 570 72.1
CSS0022046 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 3.4e-231 805.4 564 74.3
SGA_v2.0_scaffold177G39433 Striga asiatica HOM05D004765 ORTHO05D005900 3.4e-231 805.4 565 74.5
Nitab4.5_0000731g0090 Nicotiana tabacum HOM05D004765 ORTHO05D005900 4.4e-231 805.1 570 74.0
Atru.chr3.3169 Acer truncatum HOM05D004765 ORTHO05D005900 5.8e-231 804.7 554 75.8
Cfa009988 Carpinus fangiana HOM05D004765 ORTHO05D005900 9.9e-231 803.9 554 75.3
Thecc.09G278900 Theobroma cacao HOM05D004765 ORTHO05D005900 2.4e-229 799.3 554 74.4
Cpa.g.sc195.23 Carica papaya HOM05D004765 ORTHO05D005900 3.2e-229 798.9 551 74.6
Potri.009G160400 Populus trichocarpa HOM05D004765 ORTHO05D005900 5.4e-229 798.1 573 70.9
SalBow6G2851 Salvia bowleyana HOM05D004765 ORTHO05D005900 9.2e-229 797.3 598 71.2
DCAR_006171 Daucus carota HOM05D004765 ORTHO05D005900 3.5e-228 795.4 556 75.0
Rhsim01G0203800 Rhododendron simsii HOM05D004765 ORTHO05D005900 6.0e-228 794.7 604 70.2
MD03G1149800 Malus domestica HOM05D004765 ORTHO05D005900 1.0e-227 793.9 548 74.5
Nitab4.5_0000227g0370 Nicotiana tabacum HOM05D004765 ORTHO05D005900 1.0e-227 793.9 555 75.7
QL01p011857 Quercus lobata HOM05D004765 ORTHO05D005900 1.7e-227 793.1 548 74.5
Sabra09G0125600 Salix brachista HOM05D004765 ORTHO05D005900 5.1e-227 791.6 572 71.2
MD11G1168600 Malus domestica HOM05D004765 ORTHO05D005900 6.6e-227 791.2 548 74.8
Sopen11g027390 Solanum pennellii HOM05D004765 ORTHO05D005900 6.6e-227 791.2 571 73.0
Nitab4.5_0003068g0090 Nicotiana tabacum HOM05D004765 ORTHO05D005900 8.7e-227 790.8 551 76.0
Solyc01g009380.3 Solanum lycopersicum HOM05D004765 ORTHO05D005900 1.5e-226 790.0 571 73.9
RcHm_v2.0_Chr5g0045881 Rosa chinensis HOM05D004765 ORTHO05D005900 1.9e-226 789.6 555 73.5
TWI31G1403 Tripterygium wilfordii HOM05D004765 ORTHO05D005900 2.5e-226 789.3 550 74.2
Ca_19442_v3 Cicer arietinum L. HOM05D004765 ORTHO05D005900 3.3e-226 788.9 571 70.8
PGR119G0504 Punica granatum HOM05D004765 ORTHO05D005900 3.3e-226 788.9 548 74.5
Peaxi162Scf00224g00217 Petunia axillaris HOM05D004765 ORTHO05D005900 4.3e-226 788.5 570 73.0
Solyc11g068670.2 Solanum lycopersicum HOM05D004765 ORTHO05D005900 7.3e-226 787.7 570 72.6
Eucgr.J00522 Eucalyptus grandis HOM05D004765 ORTHO05D005900 9.6e-226 787.3 554 72.7
ECA248G3663 Erigeron canadensis HOM05D004765 ORTHO05D005900 2.8e-225 785.8 547 74.2
COL.COLO4_34006 Corchorus olitorius HOM05D004765 ORTHO05D005900 6.2e-225 784.6 553 73.4
Gorai.009G084100 Gossypium raimondii HOM05D004765 ORTHO05D005900 6.2e-225 784.6 547 73.5
TPR.G17196 Trifolium pratense HOM05D004765 ORTHO05D005900 8.1e-225 784.3 571 71.1
Gohir.D05G082500 Gossypium hirsutum HOM05D004765 ORTHO05D005900 1.4e-224 783.5 547 73.3
Gohir.A05G079600 Gossypium hirsutum HOM05D004765 ORTHO05D005900 2.4e-224 782.7 547 73.3
Glyma.12G091700 Glycine max HOM05D004765 ORTHO05D005900 3.1e-224 782.3 563 70.9
FAN11G2377 Fragaria x ananassa HOM05D004765 ORTHO05D005900 5.3e-224 781.6 562 72.6
Lalb_Chr01g0004931 Lupinus albus HOM05D004765 ORTHO05D005900 5.3e-224 781.6 570 70.5
Lsat_1_v5_gn_1_77581 Lactuca sativa HOM05D004765 ORTHO05D005900 2.6e-223 779.2 550 73.5
Haze_23347 Corylus avellana HOM05D004765 ORTHO05D005900 4.4e-223 778.5 622 67.4
FAN16G1441 Fragaria x ananassa HOM05D004765 ORTHO05D005900 4.4e-223 778.5 555 72.6
Lj3g0002417 Lotus japonicus HOM05D004765 ORTHO05D005900 7.6e-223 777.7 551 71.5
Lalb_Chr03g0028231 Lupinus albus HOM05D004765 ORTHO05D005900 7.6e-223 777.7 572 69.9
HanXRQChr11g0343661 Helianthus annuus HOM05D004765 ORTHO05D005900 9.9e-223 777.3 550 73.3
Gohir.D09G096800 Gossypium hirsutum HOM05D004765 ORTHO05D005900 1.3e-222 776.9 570 71.2
Glyma.11G181400 Glycine max HOM05D004765 ORTHO05D005900 1.7e-222 776.5 551 71.1
Gohir.A09G097000 Gossypium hirsutum HOM05D004765 ORTHO05D005900 1.7e-222 776.5 570 71.1
Gorai.006G113500 Gossypium raimondii HOM05D004765 ORTHO05D005900 2.2e-222 776.2 570 71.1
CANSAT54G2137 Cannabis sativa HOM05D004765 ORTHO05D005900 4.9e-222 775.0 557 72.4
TWI79G1303 Tripterygium wilfordii HOM05D004765 ORTHO05D005900 6.4e-222 774.6 550 72.7
Nitab4.5_0008177g0070 Nicotiana tabacum HOM05D004765 ORTHO05D005900 8.4e-222 774.2 626 67.3
Medtr4g052530 Medicago truncatula HOM05D004765 ORTHO05D005900 3.2e-221 772.3 593 69.0
arahy.Tifrunner.gnm1.ann1.HXUJ4C Arachis hypogaea HOM05D004765 ORTHO05D005900 5.4e-221 771.5 568 70.4
Phvul.011G096100 Phaseolus vulgaris HOM05D004765 ORTHO05D005900 1.2e-220 770.4 571 69.9
FAN21G2648 Fragaria x ananassa HOM05D004765 ORTHO05D005900 2.1e-220 769.6 570 70.7
Potri.004G198200 Populus trichocarpa HOM05D004765 ORTHO05D005900 2.1e-220 769.6 559 71.4
arahy.Tifrunner.gnm1.ann1.E8Y1JT Arachis hypogaea HOM05D004765 ORTHO05D005900 3.5e-220 768.8 568 70.2
HanXRQChr01g0024031 Helianthus annuus HOM05D004765 ORTHO05D005900 7.8e-220 767.7 551 72.8
FAN25G0471 Fragaria x ananassa HOM05D004765 ORTHO05D005900 1.3e-219 766.9 578 69.9
CAN.G745.10 Capsicum annuum HOM05D004765 ORTHO05D005900 3.0e-219 765.8 554 72.0
Sabra04G0134200 Salix brachista HOM05D004765 ORTHO05D005900 3.9e-219 765.4 559 71.0
Sc12g0004610 Simmondsia chinensis HOM05D004765 ORTHO05D005900 6.6e-219 764.6 555 71.2
Hund20934 Selenicereus undatus HOM05D004765 ORTHO05D005900 3.3e-218 762.3 548 71.7
Migut.D02363 Erythranthe guttata HOM05D004765 ORTHO05D005900 2.8e-217 759.2 504 77.6
CDE08G1681 Ceratophyllum demersum HOM05D004765 ORTHO05D005900 1.8e-216 756.5 551 69.3
THA.LOC104814781 Tarenaya hassleriana HOM05D004765 ORTHO05D005900 1.7e-214 750.0 570 67.7
CARHR104550 Cardamine hirsuta HOM05D004765 ORTHO05D005900 2.9e-214 749.2 565 68.8
Sp5g16890 Schrenkiella parvula HOM05D004765 ORTHO05D005900 3.8e-214 748.8 570 68.4
Aa31LG4G13830 Aethionema arabicum HOM05D004765 ORTHO05D005900 4.9e-214 748.4 565 68.8
ClCG01G011820 Citrullus lanatus HOM05D004765 ORTHO05D005900 4.9e-214 748.4 570 68.1
AL5G22480 Arabidopsis lyrata HOM05D004765 ORTHO05D005900 6.4e-214 748.0 553 69.4
Carub.0005s1005 Capsella rubella HOM05D004765 ORTHO05D005900 1.1e-213 747.3 570 67.7
AUR62020257 Chenopodium quinoa HOM05D004765 ORTHO05D005900 1.1e-213 747.3 551 70.6
Thhalv10010249m.g Eutrema salsugineum HOM05D004765 ORTHO05D005900 2.4e-213 746.1 570 68.4
AT3G44330 Arabidopsis thaliana HOM05D004765 ORTHO05D005900 3.2e-213 745.7 570 67.7
PSO801G0028 Papaver somniferum HOM05D004765 ORTHO05D005900 3.2e-213 745.7 557 69.7
Sed0019641 Sechium edule HOM05D004765 ORTHO05D005900 3.2e-213 745.7 547 69.3
Duzib170G0619 Durio zibethinus HOM05D004765 ORTHO05D005900 4.2e-213 745.3 530 71.3
PSO339G1244 Papaver somniferum HOM05D004765 ORTHO05D005900 4.2e-213 745.3 557 69.5
Psat7g187280 Pisum sativum HOM05D004765 ORTHO05D005900 7.1e-213 744.6 533 70.4
ATR0081G060 Amborella trichopoda HOM05D004765 ORTHO05D005900 1.2e-212 743.8 547 68.0
MELO3C025589.2 Cucumis melo HOM05D004765 ORTHO05D005900 1.6e-212 743.4 567 67.7
BraA06t25294Z Brassica rapa HOM05D004765 ORTHO05D005900 2.3e-211 739.6 556 68.5
CsaV3_1G015080 Cucumis sativus L. HOM05D004765 ORTHO05D005900 3.9e-211 738.8 567 67.2
BcaB01g01169 Brassica carinata HOM05D004765 ORTHO05D005900 2.5e-210 736.1 556 67.3
unitig_0.g1473 Utricularia gibba HOM05D004765 ORTHO05D005900 2.5e-210 736.1 574 67.2
BcaC01g02231 Brassica carinata HOM05D004765 ORTHO05D005900 5.6e-210 734.9 570 67.4
Aqoxy2G01052 Aquilegia oxysepala HOM05D004765 ORTHO05D005900 1.3e-209 733.8 553 68.7
A06p22050 Brassica napus HOM05D004765 ORTHO05D005900 2.1e-209 733.0 556 68.0
C03p69330 Brassica napus HOM05D004765 ORTHO05D005900 8.1e-209 731.1 556 67.8
BolC3t19191H Brassica oleracea HOM05D004765 ORTHO05D005900 8.1e-209 731.1 556 67.8
Nn6g34806 Nelumbo nucifera HOM05D004765 ORTHO05D005900 1.8e-208 729.9 555 68.8
BcaC01g02031 Brassica carinata HOM05D004765 ORTHO05D005900 5.3e-208 728.4 556 67.4
A06p26850 Brassica napus HOM05D004765 ORTHO05D005900 6.9e-208 728.0 565 67.3
BcaB02g10755 Brassica carinata HOM05D004765 ORTHO05D005900 5.8e-207 724.9 550 67.8
Aqoxy4G02718 Aquilegia oxysepala HOM05D004765 ORTHO05D005900 1.2e-204 717.2 594 64.6
HPP92_006357 Vanilla planifolia HOM05D004765 ORTHO05D005900 8.7e-203 711.1 557 65.9
EL10Ac7g16329 Beta vulgaris HOM05D004765 ORTHO05D005900 1.0e-198 697.6 627 60.8
Os08g0102100 Oryza sativa ssp. japonica HOM05D004765 ORTHO05D005900 4.9e-198 695.3 563 63.6
FvH4_3g25670 Fragaria vesca HOM05D004765 ORTHO05D005900 3.2e-197 692.6 497 71.4
Lj1A257T30 Lonicera japonica HOM05D004765 ORTHO05D005900 1.9e-194 683.3 444 78.2
Duzib168G0312 Durio zibethinus HOM05D004765 ORTHO05D005900 1.8e-192 676.8 554 65.2
Zm00001eb259900 Zea mays HOM05D004765 ORTHO05D005900 6.5e-190 668.3 559 62.3
Zm00001eb198750 Zea mays HOM05D004765 ORTHO05D005900 1.0e-182 644.4 534 61.2
CDE02G4012 Ceratophyllum demersum HOM05D004765 ORTHO05D005900 2.9e-182 642.9 550 62.4
Oeu014468.1 Olea europaea HOM05D004765 ORTHO05D005900 5.1e-179 632.1 375 87.7
Sc12g0004660 Simmondsia chinensis HOM05D004765 ORTHO05D005900 2.4e-176 623.2 474 69.0
Mapoly0185s0020 Marchantia polymorpha HOM05D004765 ORTHO05D005900 5.0e-174 615.5 563 57.0
Pp3c12_11630 Physcomitrium patens HOM05D004765 ORTHO05D005900 8.2e-169 598.2 543 56.7
AUR62001526 Chenopodium quinoa HOM05D004765 ORTHO05D005900 3.6e-164 582.8 437 68.9
SMO141G0161 Selaginella moellendorffii HOM05D004765 ORTHO05D005900 6.1e-164 582.0 552 56.0
C03p67600 Brassica napus HOM05D004765 ORTHO05D005900 5.7e-154 548.9 436 64.9
BolSC21t60262H Brassica oleracea HOM05D004765 ORTHO05D005900 6.3e-153 545.4 436 64.7
BraA06t25618Z Brassica rapa HOM05D004765 ORTHO05D005900 1.1e-152 544.7 431 65.0
TAR633G2468 Trochodendron aralioides HOM05D004765 ORTHO05D005900 3.5e-151 539.7 379 72.6
Sopen01g004890 Solanum pennellii HOM05D004765 ORTHO05D005900 6.8e-131 472.2 364 70.1
CBR_g17963 Chara braunii HOM05D004765 ORTHO05D005900 3.2e-128 463.4 548 46.7
AagrBONN_evm.TU.Sc2ySwM_368.2350 Anthoceros agrestis HOM05D004765 ORTHO05D005900 1.7e-118 431.0 531 44.1
CAN.G226.4 Capsicum annuum HOM05D004765 ORTHO05D005900 9.9e-114 415.2 357 64.1
VMungo1127G1239 Vigna mungo HOM05D004765 ORTHO05D005900 1.7e-105 387.9 245 78.4
SEGI_38882 Sequoiadendron giganteum HOM05D004765 ORTHO05D005900 3.4e-98 363.6 219 79.0
CAN.G30.1 Capsicum annuum HOM05D004765 ORTHO05D005900 1.0e-78 298.9 217 68.2
Migut.D02428 Erythranthe guttata HOM05D004765 ORTHO05D005900 5.5e-72 276.6 172 82.0
Psat4g157520 Pisum sativum HOM05D004765 ORTHO05D005900 2.6e-61 241.1 216 61.1
CAN.G198.33 Capsicum annuum HOM05D004765 ORTHO05D005900 2.3e-54 218.0 152 70.4
CAN.G1211.3 Capsicum annuum HOM05D004765 ORTHO05D005900 1.4e-51 208.8 147 71.4
CAN.G79.7 Capsicum annuum HOM05D004765 ORTHO05D005900 2.2e-41 174.9 139 66.2
CAN.G79.6 Capsicum annuum HOM05D004765 ORTHO05D005900 9.4e-40 169.5 119 70.6
SEGI_20304 Sequoiadendron giganteum HOM05D004765 ORTHO05D005900 1.0e-38 166.0 114 72.8
Lj1C257T9 Lonicera japonica HOM05D004765 ORTHO05D030006 1.8e-22 112.1 119 54.6
SEGI_19690 Sequoiadendron giganteum HOM05D004765 ORTHO05D005900 5.2e-22 110.5 110 51.8
VMungo0251G2550 Vigna mungo HOM05D000107 ORTHO05D000001 6.4e-20 103.6 127 46.5
Sc12g0004650 Simmondsia chinensis HOM05D004765 ORTHO05D030006 2.0e-18 98.6 84 61.9
QL04p027443 Quercus lobata HOM05D004765 ORTHO05D030006 1.0e-17 96.3 81 60.5
SEGI_24377 Sequoiadendron giganteum HOM05D004765 ORTHO05D030006 3.9e-17 94.4 83 54.2
TAR633G0557 Trochodendron aralioides HOM05D004765 ORTHO05D005900 3.9e-17 94.4 100 57.0
Os12g0509400 Oryza sativa ssp. japonica HOM05D004765 ORTHO05D296799 2.5e-08 65.1 53 58.5
Pp3c10_16910 Physcomitrium patens HOM05D004765 ORTHO05D315325 9.5e-08 63.2 111 35.1


User provided reference genes

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