Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu051555.1 Olea europaea HOM05D005382 ORTHO05D006795 1.5e-78 296.2 157 100.0
Oeu003125.1 Olea europaea HOM05D005382 ORTHO05D006795 1.3e-74 283.1 157 94.9
TWI12G1456 Tripterygium wilfordii HOM05D005382 ORTHO05D006795 4.1e-60 235.0 156 78.8
Manes.04G100900 Manihot esculenta HOM05D005382 ORTHO05D006795 2.6e-59 232.3 158 77.8
MSTRG.22842 Avicennia marina HOM05D005382 ORTHO05D006795 7.6e-59 230.7 158 77.8
PGR102G0492 Punica granatum HOM05D005382 ORTHO05D006795 4.2e-57 224.9 157 76.4
Potri.001G041900 Populus trichocarpa HOM05D005382 ORTHO05D006795 5.5e-57 224.6 163 76.1
TWI75G0559 Tripterygium wilfordii HOM05D005382 ORTHO05D006795 5.5e-57 224.6 156 75.6
QL05p036845 Quercus lobata HOM05D005382 ORTHO05D006795 9.3e-57 223.8 156 74.4
HanXRQChr04g0100021 Helianthus annuus HOM05D005382 ORTHO05D006795 1.2e-56 223.4 163 73.6
Cfa001857 Carpinus fangiana HOM05D005382 ORTHO05D006795 1.6e-56 223.0 159 74.2
Manes.11G069200 Manihot esculenta HOM05D005382 ORTHO05D006795 2.1e-56 222.6 163 74.8
Thecc.06G046600 Theobroma cacao HOM05D005382 ORTHO05D006795 2.1e-56 222.6 157 75.2
DCAR_021374 Daucus carota HOM05D005382 ORTHO05D006795 2.7e-56 222.2 158 76.6
MSTRG.9395 Avicennia marina HOM05D005382 ORTHO05D006795 4.6e-56 221.5 157 77.7
MD17G1226400 Malus domestica HOM05D005382 ORTHO05D006795 4.6e-56 221.5 159 74.8
COL.COLO4_26772 Corchorus olitorius HOM05D005382 ORTHO05D006795 6.1e-56 221.1 157 74.5
Hma1.2p1_0329F.1_g127290 Hydrangea macrophylla HOM05D005382 ORTHO05D006795 6.1e-56 221.1 158 74.1
Eucgr.F03985 Eucalyptus grandis HOM05D005382 ORTHO05D006795 7.9e-56 220.7 159 76.7
Potri.003G184925 Populus trichocarpa HOM05D005382 ORTHO05D006795 7.9e-56 220.7 159 75.5
Ciclev10026461m.g Citrus clementina HOM05D005382 ORTHO05D006795 1.0e-55 220.3 147 78.9
SGA_v2.0_scaffold515G52664 Striga asiatica HOM05D003096 ORTHO05D003521 1.3e-55 219.9 144 81.9
MSTRG.11221 Avicennia marina HOM05D005382 ORTHO05D006795 1.8e-55 219.5 159 74.2
Actinidia08935 Actinidia chinensis HOM05D005382 ORTHO05D006795 2.3e-55 219.2 161 75.8
Sabra03G0135500 Salix brachista HOM05D005382 ORTHO05D006795 2.3e-55 219.2 163 73.0
CiPaw.01G256500 Carya illinoinensis HOM05D005382 ORTHO05D006795 3.0e-55 218.8 159 73.6
Lsat_1_v5_gn_4_85061 Lactuca sativa HOM05D005382 ORTHO05D006795 3.0e-55 218.8 142 82.4
MD09G1227600 Malus domestica HOM05D005382 ORTHO05D006795 3.0e-55 218.8 159 73.6
Glyma.08G220400 Glycine max HOM05D005382 ORTHO05D006795 5.1e-55 218.0 158 74.1
vmacro16842 Vaccinium macrocarpon HOM05D005382 ORTHO05D006795 5.1e-55 218.0 160 74.4
Cc04_g05300 Coffea canephora HOM05D005382 ORTHO05D006795 6.7e-55 217.6 160 75.0
ECA247G2189 Erigeron canadensis HOM05D005382 ORTHO05D006795 6.7e-55 217.6 160 72.5
Prupe.3G103600 Prunus persica HOM05D005382 ORTHO05D006795 6.7e-55 217.6 139 80.6
Duzib235G0288 Durio zibethinus HOM05D005382 ORTHO05D006795 1.1e-54 216.9 159 73.6
CAN.G1008.7 Capsicum annuum HOM05D005382 ORTHO05D006795 1.5e-54 216.5 157 73.2
Lsat_1_v5_gn_1_30801 Lactuca sativa HOM05D005382 ORTHO05D006795 1.5e-54 216.5 164 75.0
SalBow1G1272 Salvia bowleyana HOM05D005382 ORTHO05D006795 1.5e-54 216.5 153 81.0
Haze_16689 Corylus avellana HOM05D005382 ORTHO05D006795 1.9e-54 216.1 152 75.0
ECA232G4196 Erigeron canadensis HOM05D005382 ORTHO05D006795 1.9e-54 216.1 159 72.3
Eucgr.J03130 Eucalyptus grandis HOM05D005382 ORTHO05D006795 2.5e-54 215.7 158 72.8
Gorai.007G085500 Gossypium raimondii HOM05D005382 ORTHO05D006795 2.5e-54 215.7 153 74.5
HanXRQChr09g0274181 Helianthus annuus HOM05D005382 ORTHO05D006795 2.5e-54 215.7 141 82.3
Migut.I00626 Erythranthe guttata HOM05D005382 ORTHO05D006795 3.3e-54 215.3 158 74.7
Sabra01G0028700 Salix brachista HOM05D005382 ORTHO05D006795 3.3e-54 215.3 163 73.0
Nitab4.5_0004738g0090 Nicotiana tabacum HOM05D005382 ORTHO05D006795 4.3e-54 214.9 158 74.1
Phvul.008G253200 Phaseolus vulgaris HOM05D005382 ORTHO05D006795 4.3e-54 214.9 139 80.6
Duzib192G0805 Durio zibethinus HOM05D005382 ORTHO05D006795 5.7e-54 214.5 159 73.6
Gohir.A11G075200 Gossypium hirsutum HOM05D005382 ORTHO05D006795 7.4e-54 214.2 153 73.9
CSS0039254 Camellia sinensis var. sinensis HOM05D005382 ORTHO05D006795 1.6e-53 213.0 141 79.4
Rhsim08G0203100 Rhododendron simsii HOM05D005382 ORTHO05D006795 2.2e-53 212.6 168 70.2
Lj5A81T85 Lonicera japonica HOM05D005382 ORTHO05D006795 2.8e-53 212.2 146 75.3
TAR625G1145 Trochodendron aralioides HOM05D005382 ORTHO05D006795 2.8e-53 212.2 139 79.9
FAN02G4537 Fragaria x ananassa HOM05D005382 ORTHO05D006795 3.7e-53 211.8 161 72.7
Glyma.07G021400 Glycine max HOM05D005382 ORTHO05D006795 3.7e-53 211.8 139 79.1
Rhsim12G0185400 Rhododendron simsii HOM05D005382 ORTHO05D006795 4.8e-53 211.5 169 70.4
SGA_v2.0_scaffold74G24593 Striga asiatica HOM05D005382 ORTHO05D006795 4.8e-53 211.5 140 75.7
VMungo0647G2390 Vigna mungo HOM05D005382 ORTHO05D006795 6.3e-53 211.1 139 79.9
EL10Ac8g19398 Beta vulgaris HOM05D005382 ORTHO05D006795 8.2e-53 210.7 152 75.0
FAN09G0036 Fragaria x ananassa HOM05D005382 ORTHO05D006795 8.2e-53 210.7 160 71.9
Medtr4g007700 Medicago truncatula HOM05D005382 ORTHO05D006795 8.2e-53 210.7 145 76.6
Nitab4.5_0002700g0060 Nicotiana tabacum HOM05D005382 ORTHO05D006795 1.1e-52 210.3 158 72.2
RcHm_v2.0_Chr2g0132311 Rosa chinensis HOM05D005382 ORTHO05D006795 1.1e-52 210.3 161 73.3
FvH4_6g28270 Fragaria vesca HOM05D005382 ORTHO05D006795 1.4e-52 209.9 161 72.0
FAN05G5289 Fragaria x ananassa HOM05D005382 ORTHO05D006795 1.4e-52 209.9 161 72.0
PSO782G0145 Papaver somniferum HOM05D005382 ORTHO05D006795 2.4e-52 209.1 162 72.8
GSVIVG01016103001 Vitis vinifera HOM05D005382 ORTHO05D006795 4.1e-52 208.4 154 70.8
Lj3g0027435 Lotus japonicus HOM05D005382 ORTHO05D006795 5.3e-52 208.0 163 71.2
Sc12g0008250 Simmondsia chinensis HOM05D005382 ORTHO05D006795 1.2e-51 206.8 157 72.0
Aa31LG4G1250 Aethionema arabicum HOM05D005382 ORTHO05D006795 1.5e-51 206.5 161 70.2
CiPaw.02G163400 Carya illinoinensis HOM05D005382 ORTHO05D006795 1.5e-51 206.5 155 70.3
Lalb_Chr25g0278731 Lupinus albus HOM05D005382 ORTHO05D006795 2.6e-51 205.7 146 74.0
Peaxi162Scf00314g01032 Petunia axillaris HOM05D005382 ORTHO05D006795 3.4e-51 205.3 143 74.1
AUR62034069 Chenopodium quinoa HOM05D007611 ORTHO05D006795 4.5e-51 204.9 141 75.2
Sopen03g036580 Solanum pennellii HOM05D005382 ORTHO05D006795 7.7e-51 204.1 169 67.5
THA.LOC104808172 Tarenaya hassleriana HOM05D005382 ORTHO05D006795 7.7e-51 204.1 161 71.4
Dinv21426 Davidia involucrata HOM05D005382 ORTHO05D006795 1.0e-50 203.8 140 78.6
PSO063G0682 Papaver somniferum HOM05D005382 ORTHO05D006795 1.0e-50 203.8 162 71.6
Nn8g40079 Nelumbo nucifera HOM05D005382 ORTHO05D006795 1.3e-50 203.4 145 73.8
AUR62032996 Chenopodium quinoa HOM05D005382 ORTHO05D006795 1.7e-50 203.0 159 69.2
Thhalv10019121m.g Eutrema salsugineum HOM05D005382 ORTHO05D006795 1.7e-50 203.0 162 69.1
PGSC0003DMG400014155 Solanum tuberosum HOM05D005382 ORTHO05D006795 1.7e-50 203.0 137 77.4
CARHR073510 Cardamine hirsuta HOM05D005382 ORTHO05D006795 2.9e-50 202.2 163 68.7
MELO3C023486.2 Cucumis melo HOM05D005382 ORTHO05D006795 8.5e-50 200.7 161 70.2
Sed0008280 Sechium edule HOM05D005382 ORTHO05D006795 8.5e-50 200.7 159 68.6
AT1G80940 Arabidopsis thaliana HOM05D005382 ORTHO05D006795 1.1e-49 200.3 162 67.9
BcaB02g07237 Brassica carinata HOM05D005382 ORTHO05D006795 1.1e-49 200.3 154 70.1
A07p26960 Brassica napus HOM05D005382 ORTHO05D006795 1.9e-49 199.5 163 68.1
BraA07t30340Z Brassica rapa HOM05D005382 ORTHO05D006795 1.9e-49 199.5 163 68.1
Carub.0002s2660 Capsella rubella HOM05D005382 ORTHO05D006795 1.9e-49 199.5 162 67.9
Solyc03g117670.4 Solanum lycopersicum HOM05D005382 ORTHO05D006795 1.9e-49 199.5 169 66.3
AL2G40440 Arabidopsis lyrata HOM05D005382 ORTHO05D006795 2.5e-49 199.1 158 68.4
Zm00001eb257680 Zea mays HOM05D005382 ORTHO05D006795 2.5e-49 199.1 135 74.1
BcaNung04166 Brassica carinata HOM05D005382 ORTHO05D006795 3.2e-49 198.7 163 68.1
C06p53570 Brassica napus HOM05D005382 ORTHO05D006795 3.2e-49 198.7 134 76.9
Nn8g40087 Nelumbo nucifera HOM05D005382 ORTHO05D006795 3.2e-49 198.7 145 72.4
BcaC08g47533 Brassica carinata HOM05D005382 ORTHO05D006795 4.2e-49 198.4 142 73.9
BolC6t40373H Brassica oleracea HOM05D005382 ORTHO05D006795 4.2e-49 198.4 142 73.9
Sp5g34800 Schrenkiella parvula HOM05D005382 ORTHO05D006795 4.2e-49 198.4 155 69.0
C06p29630 Brassica napus HOM05D005382 ORTHO05D006795 5.5e-49 198.0 163 68.1
BolC6t38128H Brassica oleracea HOM05D005382 ORTHO05D006795 5.5e-49 198.0 163 68.1
A07p44750 Brassica napus HOM05D005382 ORTHO05D006795 7.2e-49 197.6 134 76.1
BraA07t31983Z Brassica rapa HOM05D005382 ORTHO05D006795 7.2e-49 197.6 134 76.1
Os02g0793900 Oryza sativa ssp. japonica HOM05D005382 ORTHO05D006795 7.2e-49 197.6 135 73.3
BcaB02g08711 Brassica carinata HOM05D005382 ORTHO05D006795 9.4e-49 197.2 139 76.3
CsaV3_7G031710 Cucumis sativus L. HOM05D005382 ORTHO05D006795 9.4e-49 197.2 161 69.6
ClCG09G003490 Citrullus lanatus HOM05D005382 ORTHO05D006795 1.2e-48 196.8 161 68.9
Gohir.D11G079900 Gossypium hirsutum HOM05D005382 ORTHO05D006795 2.1e-48 196.1 136 75.7
Lalb_Chr01g0011991 Lupinus albus HOM05D005382 ORTHO05D006795 2.1e-48 196.1 138 75.4
MBI15_g08404_MAGBIO Magnolia biondii HOM05D005382 ORTHO05D006795 1.4e-47 193.4 159 65.4
CDE07G1687 Ceratophyllum demersum HOM05D005382 ORTHO05D006795 6.7e-47 191.0 140 72.9
FAN14G0578 Fragaria x ananassa HOM05D005382 ORTHO05D006795 8.8e-47 190.7 137 75.2
CDE04G1090 Ceratophyllum demersum HOM05D005382 ORTHO05D006795 1.1e-46 190.3 139 73.4
TPR.G3367 Trifolium pratense HOM05D005382 ORTHO05D006795 3.3e-46 188.7 134 75.4
ATR0580G392 Amborella trichopoda HOM05D005382 ORTHO05D006795 4.4e-46 188.3 156 69.2
Psat7g262200 Pisum sativum HOM05D005382 ORTHO05D006795 1.4e-44 183.3 133 73.7
Cpa.g.c28380.1 Carica papaya HOM05D005382 ORTHO05D006795 2.0e-43 179.5 138 69.6
HPP92_010348 Vanilla planifolia HOM05D005382 ORTHO05D006795 4.5e-43 178.3 149 62.4
CANSAT56G2690 Cannabis sativa HOM05D005382 ORTHO05D006795 1.0e-42 177.2 168 60.1
Mapoly0128s0009 Marchantia polymorpha HOM05D005382 ORTHO05D006795 9.4e-41 170.6 131 67.9
SEGI_41275 Sequoiadendron giganteum HOM05D005382 ORTHO05D006795 1.2e-40 170.2 129 67.4
SMO145G0139 Selaginella moellendorffii HOM05D005382 ORTHO05D006795 1.6e-40 169.9 133 63.2
arahy.Tifrunner.gnm1.ann1.7IZ6IW Arachis hypogaea HOM05D005382 ORTHO05D006795 3.6e-40 168.7 152 63.8
arahy.Tifrunner.gnm1.ann1.HUQR60 Arachis hypogaea HOM05D005382 ORTHO05D006795 3.6e-40 168.7 152 63.8
Ah.14g085670 Amaranthus hybridus HOM05D005382 ORTHO05D006795 2.8e-37 159.1 141 63.8
Pp3c16_25700 Physcomitrium patens HOM05D005382 ORTHO05D006795 2.8e-37 159.1 156 59.0
Pp3c25_9780 Physcomitrium patens HOM05D005382 ORTHO05D006795 4.8e-37 158.3 149 61.1
SEGI_02613 Sequoiadendron giganteum HOM05D005382 ORTHO05D006795 4.7e-32 141.7 120 60.8
CSS0015514 Camellia sinensis var. sinensis HOM05D005382 ORTHO05D006795 1.7e-26 123.2 73 80.8
Hund12559 Selenicereus undatus HOM05D005382 ORTHO05D006795 2.1e-24 116.3 91 63.7
unitig_22.g6275 Utricularia gibba HOM05D005382 ORTHO05D006795 4.0e-23 112.1 77 77.9
Atru.chr1.2804_Atru.chr1.2805 Acer truncatum HOM05D005382 ORTHO05D006795 5.2e-23 111.7 156 49.4
Actinidia36864 Actinidia chinensis HOM05D005382 ORTHO05D006795 1.5e-22 110.2 145 50.3
BcaB07g33703 Brassica carinata HOM05D005382 ORTHO05D006795 3.4e-22 109.0 96 64.6
BcaB07g33704 Brassica carinata HOM05D005382 ORTHO05D006795 3.5e-19 99.0 63 79.4
BcaB07g33705 Brassica carinata HOM05D005382 ORTHO05D006795 3.5e-19 99.0 63 79.4
Actinidia26580 Actinidia chinensis HOM05D005382 ORTHO05D006795 3.3e-17 92.4 70 72.9
AagrBONN_evm.TU.Sc2ySwM_117.2014 Anthoceros agrestis HOM05D005382 ORTHO05D006795 6.1e-16 88.2 72 66.7
TPR.G1583 Trifolium pratense HOM05D005382 ORTHO05D006795 1.6e-08 63.5 45 73.3


User provided reference genes

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