Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu051536.1 Olea europaea HOM05D002516 ORTHO05D002703 1.2e-71 273.1 138 100.0
Oeu007786.2 Olea europaea HOM05D002516 ORTHO05D002703 4.2e-29 131.7 80 80.0
MSTRG.18838 Avicennia marina HOM05D002516 ORTHO05D002703 1.2e-23 113.6 81 70.4
SGA_v2.0_scaffold6G03500 Striga asiatica HOM05D002516 ORTHO05D002703 1.4e-19 100.1 80 61.2
Dinv19179 Davidia involucrata HOM05D002516 ORTHO05D002703 5.8e-18 94.7 80 62.5
Dinv12654 Davidia involucrata HOM05D002516 ORTHO05D002703 7.5e-18 94.4 80 63.8
Ciclev10022263m.g Citrus clementina HOM05D002516 ORTHO05D002703 9.8e-18 94.0 78 64.1
Haze_15034 Corylus avellana HOM05D002516 ORTHO05D002703 9.8e-18 94.0 94 53.2
Nitab4.5_0002641g0170 Nicotiana tabacum HOM05D002516 ORTHO05D002703 9.8e-18 94.0 81 59.3
Atru.chr6.1421 Acer truncatum HOM05D002516 ORTHO05D002703 1.7e-17 93.2 125 47.2
Actinidia09470 Actinidia chinensis HOM05D002516 ORTHO05D002703 2.2e-17 92.8 81 59.3
Atru.chr2.3423 Acer truncatum HOM05D002516 ORTHO05D002703 2.9e-17 92.4 79 64.6
CSS0033368 Camellia sinensis var. sinensis HOM05D002516 ORTHO05D002703 3.7e-17 92.0 81 58.0
Hma1.2p1_0226F.1_g095436 Hydrangea macrophylla HOM05D002516 ORTHO05D002703 3.7e-17 92.0 81 61.7
Cfa004378 Carpinus fangiana HOM05D002516 ORTHO05D002703 1.4e-16 90.1 81 56.8
Hma1.2p1_2668F.1_g326570 Hydrangea macrophylla HOM05D002516 ORTHO05D002703 2.4e-16 89.4 81 60.5
Hma1.2p1_0149F.1_g066360 Hydrangea macrophylla HOM05D002516 ORTHO05D002703 3.2e-16 89.0 81 59.3
QL09p051749 Quercus lobata HOM05D002516 ORTHO05D002703 3.2e-16 89.0 75 60.0
QL09p052462 Quercus lobata HOM05D002516 ORTHO05D002703 3.2e-16 89.0 75 60.0
Solyc06g007870.3 Solanum lycopersicum HOM05D002516 ORTHO05D002703 3.2e-16 89.0 81 58.0
Sopen06g002720 Solanum pennellii HOM05D002516 ORTHO05D002703 4.1e-16 88.6 81 58.0
Cc01_g16770 Coffea canephora HOM05D002516 ORTHO05D002703 5.4e-16 88.2 80 57.5
Nitab4.5_0002616g0040 Nicotiana tabacum HOM05D002516 ORTHO05D002703 1.2e-15 87.0 77 59.7
Peaxi162Scf00238g00046 Petunia axillaris HOM05D002516 ORTHO05D002703 1.6e-15 86.7 81 56.8
Actinidia30057 Actinidia chinensis HOM05D002516 ORTHO05D002703 3.5e-15 85.5 80 58.8
PGSC0003DMG400003404 Solanum tuberosum HOM05D002516 ORTHO05D002703 4.6e-15 85.1 81 55.6
CSS0005528 Camellia sinensis var. sinensis HOM05D002516 ORTHO05D002703 6.0e-15 84.7 82 58.5
Nitab4.5_0007846g0010 Nicotiana tabacum HOM05D002516 ORTHO05D002703 6.0e-15 84.7 81 55.6
unitig_899.g15409 Utricularia gibba HOM05D002516 ORTHO05D002703 6.0e-15 84.7 83 55.4
Actinidia39434 Actinidia chinensis HOM05D002516 ORTHO05D002703 1.0e-14 84.0 85 55.3
Nn1g07949 Nelumbo nucifera HOM05D002516 ORTHO05D002703 3.0e-14 82.4 82 51.2
TAR365G0852 Trochodendron aralioides HOM05D002516 ORTHO05D002703 3.0e-14 82.4 85 52.9
Nitab4.5_0000045g0450 Nicotiana tabacum HOM05D002516 ORTHO05D002703 3.9e-14 82.0 81 54.3
Lj1C88T6 Lonicera japonica HOM05D002516 ORTHO05D002703 5.0e-14 81.6 85 56.5
Rhsim13G0047300 Rhododendron simsii HOM05D002516 ORTHO05D002703 6.6e-14 81.3 80 52.5
vmacro02780 Vaccinium macrocarpon HOM05D002516 ORTHO05D002703 8.6e-14 80.9 80 51.2
Migut.D02502 Erythranthe guttata HOM05D002516 ORTHO05D002703 1.1e-13 80.5 83 54.2
Potri.014G191400 Populus trichocarpa HOM05D002516 ORTHO05D002703 2.5e-13 79.3 78 52.6
Manes.13G049000 Manihot esculenta HOM05D002516 ORTHO05D002703 3.3e-13 79.0 100 50.0
CiPaw.01G049600 Carya illinoinensis HOM05D002516 ORTHO05D002703 1.2e-12 77.0 80 55.0
Eucgr.K02140 Eucalyptus grandis HOM05D002516 ORTHO05D002703 8.1e-12 74.3 82 51.2
Rhsim01G0254000 Rhododendron simsii HOM05D002516 ORTHO05D002703 8.1e-12 74.3 80 51.2
CANSAT01G2920 Cannabis sativa HOM05D002516 ORTHO05D002703 1.1e-11 73.9 82 53.7
CANSAT01G0325 Cannabis sativa HOM05D002516 ORTHO05D002703 1.8e-11 73.2 82 53.7
Prupe.8G199600 Prunus persica HOM05D002516 ORTHO05D002703 2.3e-11 72.8 79 50.6
Cpa.g.sc8.125 Carica papaya HOM05D002516 ORTHO05D002703 3.1e-11 72.4 78 51.3
vmacro14740 Vaccinium macrocarpon HOM05D002516 ORTHO05D002703 4.0e-11 72.0 81 48.1
Duzib133G1084 Durio zibethinus HOM05D002516 ORTHO05D002703 5.2e-11 71.6 94 52.1
PGSC0003DMG400027947 Solanum tuberosum HOM05D002516 ORTHO05D002703 5.2e-11 71.6 82 47.6
MELO3C022715.2 Cucumis melo HOM05D002516 ORTHO05D002703 1.2e-10 70.5 79 51.9
CsaV3_3G030010 Cucumis sativus L. HOM05D002516 ORTHO05D002703 1.2e-10 70.5 79 51.9
Gohir.A11G139500 Gossypium hirsutum HOM05D002516 ORTHO05D002703 1.2e-10 70.5 80 52.5
AUR62001129 Chenopodium quinoa HOM05D002516 ORTHO05D002703 1.5e-10 70.1 83 48.2
Solyc09g059450.4 Solanum lycopersicum HOM05D002516 ORTHO05D002703 2.0e-10 69.7 82 46.3
Sopen09g022610 Solanum pennellii HOM05D002516 ORTHO05D002703 2.0e-10 69.7 82 46.3
DCAR_004734 Daucus carota HOM05D002516 ORTHO05D002703 2.6e-10 69.3 79 48.1
Glyma.12G028700 Glycine max HOM05D002516 ORTHO05D002703 2.6e-10 69.3 80 51.2
TWI75G1449 Tripterygium wilfordii HOM05D002516 ORTHO05D002703 3.4e-10 68.9 93 45.2
TAR636G2916 Trochodendron aralioides HOM05D002516 ORTHO05D002703 3.4e-10 68.9 79 49.4
Gorai.007G156200 Gossypium raimondii HOM05D002516 ORTHO05D002703 4.4e-10 68.6 80 51.2
RcHm_v2.0_Chr6g0284181 Rosa chinensis HOM05D002516 ORTHO05D002703 4.4e-10 68.6 77 50.6
Thecc.01G221100 Theobroma cacao HOM05D002516 ORTHO05D002703 5.8e-10 68.2 88 47.7
AUR62016552 Chenopodium quinoa HOM05D002516 ORTHO05D002703 7.5e-10 67.8 84 48.8
Lalb_Chr19g0139301 Lupinus albus HOM05D002516 ORTHO05D002703 7.5e-10 67.8 104 43.3
Nn3g20050 Nelumbo nucifera HOM05D002516 ORTHO05D002703 7.5e-10 67.8 82 43.9
Gohir.A07G199400 Gossypium hirsutum HOM05D002516 ORTHO05D002703 9.8e-10 67.4 84 48.8
Gorai.001G231800 Gossypium raimondii HOM05D002516 ORTHO05D002703 1.3e-09 67.0 84 48.8
Gohir.A07G158100 Gossypium hirsutum HOM05D002516 ORTHO05D002703 1.7e-09 66.6 94 48.9
Glyma.11G103800 Glycine max HOM05D002516 ORTHO05D002703 2.2e-09 66.2 79 50.6
Gohir.D11G145700 Gossypium hirsutum HOM05D002516 ORTHO05D002703 2.2e-09 66.2 77 51.9
TWI18G0693 Tripterygium wilfordii HOM05D002516 ORTHO05D002703 2.2e-09 66.2 93 44.1
CiPaw.02G023100 Carya illinoinensis HOM05D002516 ORTHO05D002703 2.9e-09 65.9 78 48.7
Manes.12G046900 Manihot esculenta HOM05D002516 ORTHO05D002703 2.9e-09 65.9 87 49.4
Ca_03039_v3 Cicer arietinum L. HOM05D002516 ORTHO05D002703 4.9e-09 65.1 90 48.9
Gohir.D07G205800 Gossypium hirsutum HOM05D002516 ORTHO05D002703 4.9e-09 65.1 80 48.8
Duzib138G0225 Durio zibethinus HOM05D002516 ORTHO05D002703 6.4e-09 64.7 77 51.9
Duzib211G0537 Durio zibethinus HOM05D002516 ORTHO05D002703 6.4e-09 64.7 77 51.9
VMungo1127G1407 Vigna mungo HOM05D002516 ORTHO05D002703 6.4e-09 64.7 76 47.4
FvH4_2g18620 Fragaria vesca HOM05D002516 ORTHO05D002703 8.3e-09 64.3 77 48.1
Sc17g0002160 Simmondsia chinensis HOM05D002516 ORTHO05D002703 8.3e-09 64.3 96 45.8
unitig_746.g26592 Utricularia gibba HOM05D002516 ORTHO05D002703 1.4e-08 63.5 61 55.7
Lsat_1_v5_gn_9_15241 Lactuca sativa HOM05D002516 ORTHO05D002703 2.4e-08 62.8 79 43.0
Phvul.011G032000 Phaseolus vulgaris HOM05D002516 ORTHO05D002703 2.4e-08 62.8 75 49.3
Psat7g174120 Pisum sativum HOM05D002516 ORTHO05D002703 2.4e-08 62.8 87 46.0
FAN24G0368 Fragaria x ananassa HOM05D002516 ORTHO05D002703 3.2e-08 62.4 77 46.8
Peaxi162Scf00372g01213 Petunia axillaris HOM05D002516 ORTHO05D002703 3.2e-08 62.4 44 65.9
FAN15G3756 Fragaria x ananassa HOM05D002516 ORTHO05D002703 4.1e-08 62.0 77 46.8
TAR362G0418 Trochodendron aralioides HOM05D002516 ORTHO05D002703 4.1e-08 62.0 69 52.2
MBI07_g22277_MAGBIO Magnolia biondii HOM05D002516 ORTHO05D002703 5.4e-08 61.6 89 42.7
Sed0020045 Sechium edule HOM05D002516 ORTHO05D002703 7.1e-08 61.2 74 45.9
Gorai.001G188100 Gossypium raimondii HOM05D002516 ORTHO05D002703 1.2e-07 60.5 94 46.8
ClCG07G002050 Citrullus lanatus HOM05D002516 ORTHO05D002703 1.6e-07 60.1 131 34.4
FAN27G2188 Fragaria x ananassa HOM05D002516 ORTHO05D002703 2.1e-07 59.7 76 47.4
THA.LOC104818971 Tarenaya hassleriana HOM05D002516 ORTHO05D002703 2.1e-07 59.7 80 42.5
Hund05574 Selenicereus undatus HOM05D002516 ORTHO05D002703 2.7e-07 59.3 84 47.6
TWI36G0113 Tripterygium wilfordii HOM05D002516 ORTHO05D002703 3.5e-07 58.9 77 46.8
DCAR_012667 Daucus carota HOM05D002516 ORTHO05D002703 6.0e-07 58.2 85 43.5
PGR083G1441 Punica granatum HOM05D002516 ORTHO05D002703 7.8e-07 57.8 79 40.5
Sabra02G0186800 Salix brachista HOM05D002516 ORTHO05D002703 1.3e-06 57.0 91 41.8
MD05G1172100 Malus domestica HOM05D002516 ORTHO05D002703 1.7e-06 56.6 87 44.8
Lsat_1_v5_gn_8_89640 Lactuca sativa HOM05D002516 ORTHO05D002703 2.3e-06 56.2 94 40.4
arahy.Tifrunner.gnm1.ann1.7060PQ Arachis hypogaea HOM05D002516 ORTHO05D002703 3.9e-06 55.5 73 47.9
arahy.Tifrunner.gnm1.ann1.WSZ24T Arachis hypogaea HOM05D002516 ORTHO05D002703 3.9e-06 55.5 73 47.9
Medtr4g074240 Medicago truncatula HOM05D002516 ORTHO05D002703 8.6e-06 54.3 44 63.6


User provided reference genes

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