Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu051515.1 Olea europaea HOM05D006548 ORTHO05D008064 1.1e-81 306.6 157 100.0
Cc01_g16030 Coffea canephora HOM05D006548 ORTHO05D008064 1.4e-68 263.1 161 83.2
Nitab4.5_0002311g0090 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.3e-66 256.5 161 80.1
Nitab4.5_0011925g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 2.9e-66 255.4 164 78.7
MSTRG.17967 Avicennia marina HOM05D006548 ORTHO05D008064 8.4e-66 253.8 157 79.6
Peaxi162Scf00372g00041 Petunia axillaris HOM05D006548 ORTHO05D008064 1.4e-65 253.1 163 79.8
Lj2P1115T39 Lonicera japonica HOM05D006548 ORTHO05D008064 7.9e-64 247.3 164 76.2
Rhsim13G0053600 Rhododendron simsii HOM05D006548 ORTHO05D008064 7.9e-64 247.3 163 76.7
SGA_v2.0_scaffold95G28706 Striga asiatica HOM05D006548 ORTHO05D008064 1.0e-63 246.9 162 77.2
Hma1.2p1_0161F.1_g071510 Hydrangea macrophylla HOM05D006548 ORTHO05D008064 2.3e-63 245.7 164 75.6
Sabra02G0182000 Salix brachista HOM05D006548 ORTHO05D008064 2.3e-63 245.7 157 77.1
Sopen06g034400 Solanum pennellii HOM05D006548 ORTHO05D008064 2.3e-63 245.7 163 76.1
CSS0021481 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 3.0e-63 245.4 164 76.2
PGSC0003DMG400027686 Solanum tuberosum HOM05D006548 ORTHO05D008064 3.9e-63 245.0 163 75.5
Nitab4.5_0001348g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.5e-62 243.0 165 74.5
Nitab4.5_0007144g0040 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.5e-62 243.0 165 74.5
Migut.N00670 Erythranthe guttata HOM05D006548 ORTHO05D008064 5.7e-62 241.1 164 75.0
Potri.002G239000 Populus trichocarpa HOM05D006548 ORTHO05D008064 5.7e-62 241.1 159 75.5
Nn3g18599 Nelumbo nucifera HOM05D006548 ORTHO05D008064 7.4e-62 240.7 158 77.2
vmacro02826 Vaccinium macrocarpon HOM05D006548 ORTHO05D008064 7.4e-62 240.7 166 75.3
Gorai.007G160300 Gossypium raimondii HOM05D006548 ORTHO05D008064 9.7e-62 240.4 163 76.7
Gohir.A11G143200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 1.6e-61 239.6 163 76.7
Manes.13G055300 Manihot esculenta HOM05D006548 ORTHO05D008064 1.6e-61 239.6 163 74.2
Manes.12G059600 Manihot esculenta HOM05D006548 ORTHO05D008064 3.7e-61 238.4 160 72.5
CAN.G874.34 Capsicum annuum HOM05D006548 ORTHO05D008064 6.3e-61 237.7 162 73.5
Gohir.D11G149500 Gossypium hirsutum HOM05D006548 ORTHO05D008064 6.3e-61 237.7 160 76.9
TAR362G1118 Trochodendron aralioides HOM05D006548 ORTHO05D008064 6.3e-61 237.7 165 72.7
Sabra14G0135300 Salix brachista HOM05D006548 ORTHO05D008064 8.2e-61 237.3 156 75.0
CSS0032607 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 3.1e-60 235.3 166 71.7
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 3.1e-60 235.3 160 74.4
Nn4g25121 Nelumbo nucifera HOM05D006548 ORTHO05D008064 3.1e-60 235.3 158 75.3
COL.COLO4_06931 Corchorus olitorius HOM05D006548 ORTHO05D008064 6.9e-60 234.2 165 73.3
Potri.014G177100 Populus trichocarpa HOM05D006548 ORTHO05D008064 1.2e-59 233.4 157 73.9
Sed0004612 Sechium edule HOM05D006548 ORTHO05D008064 1.5e-59 233.0 161 73.9
PGR083G0463 Punica granatum HOM05D006548 ORTHO05D008064 2.0e-59 232.6 160 74.4
Gohir.D07G202600 Gossypium hirsutum HOM05D006548 ORTHO05D008064 3.4e-59 231.9 159 75.5
PSO017G5831 Papaver somniferum HOM05D006548 ORTHO05D008064 5.9e-59 231.1 158 73.4
Gorai.001G228000 Gossypium raimondii HOM05D006548 ORTHO05D008064 1.0e-58 230.3 159 74.8
CiPaw.13G058400 Carya illinoinensis HOM05D006548 ORTHO05D008064 1.7e-58 229.6 150 77.3
Ciclev10017030m.g Citrus clementina HOM05D006548 ORTHO05D008064 1.7e-58 229.6 159 72.3
Duzib138G0849 Durio zibethinus HOM05D006548 ORTHO05D008064 8.5e-58 227.3 159 73.6
PSO675G8742 Papaver somniferum HOM05D006548 ORTHO05D008064 2.5e-57 225.7 157 72.0
Cpa.g.sc8.57 Carica papaya HOM05D004405 ORTHO05D005613 3.2e-57 225.3 161 71.4
Duzib211G0675 Durio zibethinus HOM05D006548 ORTHO05D008064 4.2e-57 224.9 159 73.6
PGSC0003DMG400020639 Solanum tuberosum HOM05D006548 ORTHO05D008064 4.2e-57 224.9 162 71.0
HanXRQChr08g0231851 Helianthus annuus HOM05D006548 ORTHO05D008064 5.5e-57 224.6 157 70.7
Solyc06g007630.1 Solanum lycopersicum HOM05D006548 ORTHO05D008064 5.5e-57 224.6 162 71.6
Sopen06g002520 Solanum pennellii HOM05D006548 ORTHO05D008064 5.5e-57 224.6 162 71.6
Atru.chr6.3534 Acer truncatum HOM05D006548 ORTHO05D008064 9.3e-57 223.8 163 71.2
Aqoxy2G04054 Aquilegia oxysepala HOM05D006548 ORTHO05D008064 9.3e-57 223.8 163 69.3
ClCG09G007890 Citrullus lanatus HOM05D006548 ORTHO05D008064 9.3e-57 223.8 167 70.1
Cfa010631 Carpinus fangiana HOM05D006548 ORTHO05D008064 1.2e-56 223.4 164 72.0
THA.LOC104819003 Tarenaya hassleriana HOM05D006548 ORTHO05D008064 1.2e-56 223.4 166 69.3
VMungo1383G2587 Vigna mungo HOM05D006548 ORTHO05D008064 2.7e-56 222.2 157 70.1
Haze_03573 Corylus avellana HOM05D006548 ORTHO05D008064 1.0e-55 220.3 166 69.9
Prupe.8G188900 Prunus persica HOM05D006548 ORTHO05D008064 1.0e-55 220.3 164 72.6
HPP92_002744 Vanilla planifolia HOM05D006548 ORTHO05D008064 1.8e-55 219.5 160 68.8
Ah.11g050830 Amaranthus hybridus HOM05D006548 ORTHO05D008064 3.9e-55 218.4 163 69.9
AL3G18800 Arabidopsis lyrata HOM05D006548 ORTHO05D008064 6.7e-55 217.6 161 68.9
AT3G07480 Arabidopsis thaliana HOM05D006548 ORTHO05D008064 6.7e-55 217.6 161 68.9
MD10G1150500 Malus domestica HOM05D006548 ORTHO05D008064 6.7e-55 217.6 160 73.8
Sp3g06390 Schrenkiella parvula HOM05D006548 ORTHO05D008064 8.7e-55 217.2 166 68.1
DCAR_030798 Daucus carota HOM05D006548 ORTHO05D008064 1.5e-54 216.5 160 68.8
QL09p047049 Quercus lobata HOM05D006548 ORTHO05D008064 1.5e-54 216.5 156 71.2
RcHm_v2.0_Chr6g0282621 Rosa chinensis HOM05D006548 ORTHO05D008064 1.5e-54 216.5 165 68.5
Os09g0514600 Oryza sativa ssp. japonica HOM05D006548 ORTHO05D008064 1.9e-54 216.1 157 66.2
unitig_61.g26345 Utricularia gibba HOM05D006548 ORTHO05D008064 1.9e-54 216.1 158 67.1
BolC5t34638H Brassica oleracea HOM05D006548 ORTHO05D008064 5.7e-54 214.5 156 71.8
A05p40730 Brassica napus HOM05D006548 ORTHO05D008064 9.7e-54 213.8 156 71.2
BraA05t22804Z Brassica rapa HOM05D006548 ORTHO05D008064 9.7e-54 213.8 156 71.2
CARHR082130 Cardamine hirsuta HOM05D006548 ORTHO05D008064 9.7e-54 213.8 165 66.1
Glyma.08G343100 Glycine max HOM05D006548 ORTHO05D008064 9.7e-54 213.8 156 66.0
Carub.0003s0703 Capsella rubella HOM05D006548 ORTHO05D008064 1.3e-53 213.4 161 68.3
C05p59840 Brassica napus HOM05D006548 ORTHO05D008064 2.2e-53 212.6 156 70.5
Thhalv10021677m.g Eutrema salsugineum HOM05D006548 ORTHO05D008064 2.8e-53 212.2 162 67.9
Lalb_Chr01g0021941 Lupinus albus HOM05D006548 ORTHO05D008064 2.8e-53 212.2 160 63.1
Phvul.008G137800 Phaseolus vulgaris HOM05D006548 ORTHO05D008064 6.3e-53 211.1 162 64.2
AUR62028648 Chenopodium quinoa HOM05D006548 ORTHO05D008064 8.2e-53 210.7 167 63.5
BcaC05g29539 Brassica carinata HOM05D006548 ORTHO05D008064 1.1e-52 210.3 163 67.5
FAN24G3284 Fragaria x ananassa HOM05D006548 ORTHO05D008064 1.1e-52 210.3 163 67.5
Glyma.18G153900 Glycine max HOM05D006548 ORTHO05D008064 1.4e-52 209.9 154 64.9
FvH4_2g17650 Fragaria vesca HOM05D006548 ORTHO05D008064 1.8e-52 209.5 165 66.7
MELO3C015717.2 Cucumis melo HOM05D006548 ORTHO05D008064 2.4e-52 209.1 166 65.1
ECA247G0922 Erigeron canadensis HOM05D006548 ORTHO05D008064 2.4e-52 209.1 163 68.1
FAN27G0042 Fragaria x ananassa HOM05D006548 ORTHO05D008064 4.1e-52 208.4 165 65.5
FAN27G0390 Fragaria x ananassa HOM05D006548 ORTHO05D008064 4.1e-52 208.4 165 65.5
Lalb_Chr03g0040981 Lupinus albus HOM05D006548 ORTHO05D008064 5.3e-52 208.0 160 65.6
Zm00001eb102720 Zea mays HOM05D006548 ORTHO05D008064 6.9e-52 207.6 158 64.6
BcaB03g14699 Brassica carinata HOM05D006548 ORTHO05D008064 9.1e-52 207.2 156 68.6
Aa31LG5G18040 Aethionema arabicum HOM05D006548 ORTHO05D008064 1.5e-51 206.5 164 64.6
Thecc.01G209700 Theobroma cacao HOM05D006548 ORTHO05D008064 1.5e-51 206.5 143 75.5
Lsat_1_v5_gn_9_16480 Lactuca sativa HOM05D006548 ORTHO05D008064 2.0e-51 206.1 164 67.7
TWI36G0698 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 2.0e-51 206.1 151 66.2
ATR0824G029 Amborella trichopoda HOM05D006548 ORTHO05D008064 2.6e-51 205.7 128 75.0
Psat3g151760 Pisum sativum HOM05D006548 ORTHO05D008064 1.0e-50 203.8 154 64.3
CANSAT01G2941 Cannabis sativa HOM05D006548 ORTHO05D008064 1.3e-50 203.4 167 59.9
arahy.Tifrunner.gnm1.ann1.C7NXRU Arachis hypogaea HOM05D006548 ORTHO05D008064 6.5e-50 201.1 159 64.8
TWI18G0731 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 2.5e-49 199.1 153 66.0
TPR.G26806 Trifolium pratense HOM05D006548 ORTHO05D008064 3.2e-49 198.7 157 64.3
TWI75G1339 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 4.2e-49 198.4 154 64.3
Ca_07442_v3 Cicer arietinum L. HOM05D006548 ORTHO05D008064 5.5e-49 198.0 154 64.3
Lj1g0008534 Lotus japonicus HOM05D006548 ORTHO05D008064 5.5e-49 198.0 162 61.1
arahy.Tifrunner.gnm1.ann1.I0E60T Arachis hypogaea HOM05D006548 ORTHO05D008064 7.2e-49 197.6 159 63.5
Medtr7g051230 Medicago truncatula HOM05D006548 ORTHO05D008064 1.2e-48 196.8 154 63.0
Zm00001eb318350 Zea mays HOM05D006548 ORTHO05D008064 2.1e-48 196.1 119 75.6
GSVIVG01003797001 Vitis vinifera HOM05D006548 ORTHO05D008064 2.0e-46 189.5 118 70.3
Sc05g0001680 Simmondsia chinensis HOM05D006548 ORTHO05D008064 3.3e-46 188.7 134 68.7
CsaV3_7G027180 Cucumis sativus L. HOM05D006548 ORTHO05D008064 1.3e-42 176.8 150 62.7
EL10Ac5g10597 Beta vulgaris HOM05D006548 ORTHO05D008064 9.4e-41 170.6 151 58.9
Gohir.A07G196200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 4.4e-38 161.8 91 83.5
Pp3c2_31000 Physcomitrium patens HOM05D006548 ORTHO05D008064 8.5e-34 147.5 149 49.0
AagrBONN_evm.TU.Sc2ySwM_362.984 Anthoceros agrestis HOM05D006548 ORTHO05D008064 1.5e-30 136.7 158 46.2
CDE12G0850 Ceratophyllum demersum HOM05D006548 ORTHO05D008064 2.6e-30 136.0 77 74.0
Ciclev10013747m.g Citrus clementina HOM05D006548 ORTHO05D008064 1.1e-28 130.6 82 73.2
BcaC05g29538 Brassica carinata HOM05D006548 ORTHO05D008064 1.9e-25 119.8 104 63.5
C03p67920 Brassica napus HOM05D006548 ORTHO05D008064 9.4e-25 117.5 90 66.7
Mapoly0085s0036 Marchantia polymorpha HOM05D006548 ORTHO05D008064 2.7e-24 115.9 131 42.7
BcaC01g02172 Brassica carinata HOM05D006548 ORTHO05D008064 6.1e-24 114.8 90 65.6
Actinidia30005 Actinidia chinensis HOM05D006548 ORTHO05D008064 1.2e-19 100.5 171 46.2
SEGI_16405 Sequoiadendron giganteum HOM05D002489 ORTHO05D002653 1.8e-15 86.7 86 57.0
BolC3t19017H Brassica oleracea HOM05D006548 ORTHO05D008064 1.3e-13 80.5 48 75.0
BraA03t13759Z Brassica rapa HOM05D006548 ORTHO05D008064 2.8e-13 79.3 48 77.1
SMO119G0279 Selaginella moellendorffii HOM05D006548 ORTHO05D008064 4.9e-13 78.6 126 34.9
CBR_g34314 Chara braunii HOM05D006548 ORTHO05D008064 1.4e-12 77.0 125 36.8
Mapoly0113s0043 Marchantia polymorpha HOM05D006548 ORTHO05D008064 1.9e-09 66.6 131 34.4


User provided reference genes

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