Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 4.2e-37 157.5 80 100.0
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 1.4e-32 142.5 80 90.0
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 6.7e-27 123.6 69 91.3
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 2.5e-26 121.7 80 80.0
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 1.3e-17 92.8 85 62.4
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 4.8e-17 90.9 78 60.3
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 8.2e-17 90.1 79 62.0
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.8e-16 89.0 79 60.8
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 7.0e-16 87.0 78 57.7
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 7.0e-16 87.0 77 57.1
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 7.0e-16 87.0 73 63.0
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 9.1e-16 86.7 79 60.8
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 1.2e-15 86.3 78 56.4
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 5.9e-15 84.0 77 54.5
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 5.9e-15 84.0 80 58.8
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 1.3e-14 82.8 79 57.0
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 1.3e-14 82.8 47 87.2
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 5.0e-14 80.9 77 53.2
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 5.0e-14 80.9 77 53.2
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 5.0e-14 80.9 77 53.2
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 6.5e-14 80.5 73 56.2
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 8.5e-14 80.1 80 58.8
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 8.5e-14 80.1 79 53.2
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 8.5e-14 80.1 79 50.6
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 1.1e-13 79.7 76 53.9
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 1.5e-13 79.3 79 51.9
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 1.5e-13 79.3 81 51.9
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 2.5e-13 78.6 74 56.8
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 3.2e-13 78.2 75 54.7
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 3.2e-13 78.2 80 53.8
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 4.2e-13 77.8 77 53.2
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 5.5e-13 77.4 86 55.8
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 7.2e-13 77.0 74 56.8
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 7.2e-13 77.0 76 61.8
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 1.2e-12 76.3 84 51.2
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 2.1e-12 75.5 78 51.3
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 3.6e-12 74.7 82 47.6
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 4.7e-12 74.3 81 48.1
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 8.0e-12 73.6 67 58.2
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 1.0e-11 73.2 81 45.7
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 1.4e-11 72.8 88 45.5
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 1.4e-11 72.8 75 57.3
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.4e-11 72.8 78 53.8
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 2.3e-11 72.0 82 51.2
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 2.3e-11 72.0 83 54.2
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 3.0e-11 71.6 84 47.6
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 4.0e-11 71.2 88 44.3
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 6.7e-11 70.5 104 40.4
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 1.1e-10 69.7 77 51.9
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 1.5e-10 69.3 84 48.8
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 1.5e-10 69.3 79 48.1
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 2.0e-10 68.9 80 47.5
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 2.0e-10 68.9 80 47.5
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 2.6e-10 68.6 82 50.0
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 2.6e-10 68.6 81 46.9
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 3.3e-10 68.2 83 50.6
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 4.4e-10 67.8 82 46.3
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 5.7e-10 67.4 81 48.1
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 7.5e-10 67.0 76 51.3
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 7.5e-10 67.0 76 51.3
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 7.5e-10 67.0 76 51.3
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 7.5e-10 67.0 88 42.0
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 7.5e-10 67.0 79 46.8
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 9.7e-10 66.6 82 46.3
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 9.7e-10 66.6 82 46.3
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 2.8e-09 65.1 75 50.7
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 4.8e-09 64.3 79 53.2
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 4.8e-09 64.3 81 46.9
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 6.3e-09 63.9 80 43.8
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 8.2e-09 63.5 83 41.0
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 8.2e-09 63.5 85 48.2
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 8.2e-09 63.5 80 48.8
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 1.1e-08 63.2 75 56.0
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 1.4e-08 62.8 89 38.2
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 1.8e-08 62.4 83 44.6
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 4.1e-08 61.2 82 43.9
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 4.1e-08 61.2 85 41.2
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 7.0e-08 60.5 75 52.0
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 1.6e-07 59.3 78 42.3
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 1.6e-07 59.3 78 47.4
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 2.0e-07 58.9 79 43.0
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 2.7e-07 58.5 96 42.7
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 2.7e-07 58.5 75 52.0
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 3.5e-07 58.2 86 43.0
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 7.7e-07 57.0 80 45.0
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 1.0e-06 56.6 89 43.8
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 1.3e-06 56.2 92 45.7
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 1.3e-06 56.2 80 46.2
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 1.3e-06 56.2 81 42.0
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 1.7e-06 55.8 89 43.8
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 1.7e-06 55.8 94 41.5
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 2.2e-06 55.5 79 43.0
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 2.9e-06 55.1 70 52.9
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 3.8e-06 54.7 84 41.7
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 6.5e-06 53.9 59 49.2
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 8.5e-06 53.5 69 53.6


User provided reference genes

Program Settings