Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu051295.1 Olea europaea HOM05D004042 ORTHO05D004552 2.4e-306 1054.7 533 100.0
Oeu054835.1 Olea europaea HOM05D004042 ORTHO05D004552 1.4e-266 922.5 534 87.8
Migut.J00573 Erythranthe guttata HOM05D004042 ORTHO05D004552 4.2e-234 814.7 548 76.6
MSTRG.19492 Avicennia marina HOM05D004042 ORTHO05D004552 2.7e-225 785.4 543 74.2
Cc06_g11620 Coffea canephora HOM05D004042 ORTHO05D004552 1.2e-215 753.4 426 85.4
Cfa003057 Carpinus fangiana HOM05D004042 ORTHO05D004552 4.4e-215 751.5 545 72.1
Haze_25938 Corylus avellana HOM05D004042 ORTHO05D004552 9.7e-215 750.4 545 72.5
Prupe.7G206100 Prunus persica HOM05D004042 ORTHO05D004552 2.9e-211 738.8 518 73.9
Ciclev10008048m.g Citrus clementina HOM05D004042 ORTHO05D004552 1.9e-210 736.1 520 72.5
Atru.chr7.1627 Acer truncatum HOM05D004042 ORTHO05D004552 2.5e-210 735.7 507 74.0
MD02G1082600 Malus domestica HOM05D004042 ORTHO05D004552 5.5e-210 734.6 543 70.2
Potri.018G066100 Populus trichocarpa HOM05D004042 ORTHO05D004552 9.4e-210 733.8 501 73.5
GSVIVG01015174001 Vitis vinifera HOM05D004042 ORTHO05D004552 3.6e-209 731.9 466 77.0
MELO3C004632.2 Cucumis melo HOM05D004042 ORTHO05D004552 1.0e-208 730.3 459 77.8
Thecc.09G085400 Theobroma cacao HOM05D004042 ORTHO05D004552 5.7e-207 724.5 541 70.8
CsaV3_2G001380 Cucumis sativus L. HOM05D004042 ORTHO05D004552 7.5e-207 724.2 537 69.8
Dinv42339 Davidia involucrata HOM05D004042 ORTHO05D004552 2.2e-206 722.6 536 72.0
CAN.G57.12 Capsicum annuum HOM05D004042 ORTHO05D004552 3.7e-206 721.8 539 69.2
TAR624G0704 Trochodendron aralioides HOM05D004042 ORTHO05D004552 1.4e-205 719.9 527 71.0
Lj4g0002498 Lotus japonicus HOM05D004042 ORTHO05D004552 2.4e-205 719.2 536 70.7
CiPaw.03G212500 Carya illinoinensis HOM05D004042 ORTHO05D004552 5.4e-205 718.0 546 69.0
QL02p062121 Quercus lobata HOM05D004042 ORTHO05D004552 5.4e-205 718.0 553 68.9
Glyma.13G106100 Glycine max HOM05D004042 ORTHO05D004552 2.7e-204 715.7 421 81.7
Actinidia25240 Actinidia chinensis HOM05D004042 ORTHO05D004552 7.7e-204 714.1 455 79.8
CiPaw.04G147900 Carya illinoinensis HOM05D004042 ORTHO05D004552 3.8e-203 711.8 539 69.2
Solyc07g040740.3 Solanum lycopersicum HOM05D004042 ORTHO05D004552 5.0e-203 711.4 532 69.2
MD15G1210700 Malus domestica HOM05D004042 ORTHO05D004552 1.9e-202 709.5 531 70.2
Psat7g044040 Pisum sativum HOM05D004042 ORTHO05D004552 4.2e-202 708.4 441 77.6
HanXRQChr10g0319461 Helianthus annuus HOM05D004042 ORTHO05D004552 7.2e-202 707.6 476 73.3
DCAR_028272 Daucus carota HOM05D004042 ORTHO05D004552 9.5e-202 707.2 449 76.8
Sopen07g019480 Solanum pennellii HOM05D004042 ORTHO05D004552 9.5e-202 707.2 532 68.8
Nn6g35535 Nelumbo nucifera HOM05D004042 ORTHO05D004552 1.2e-201 706.8 529 67.9
Glyma.17G053300 Glycine max HOM05D004042 ORTHO05D004552 2.8e-201 705.7 528 69.1
Sed0015499 Sechium edule HOM05D004042 ORTHO05D004552 4.7e-201 704.9 505 71.7
HanXRQChr12g0354671 Helianthus annuus HOM05D004042 ORTHO05D004552 6.1e-201 704.5 454 76.4
PGR142G2341 Punica granatum HOM05D004042 ORTHO05D004552 1.4e-200 703.4 532 68.6
PSO063G3240 Papaver somniferum HOM05D004042 ORTHO05D004552 1.8e-200 703.0 429 79.3
Medtr4g125980 Medicago truncatula HOM05D004042 ORTHO05D004552 3.0e-200 702.2 493 71.2
Sc08g0008580 Simmondsia chinensis HOM05D004042 ORTHO05D004552 6.8e-200 701.0 424 80.4
Medtr2g039940 Medicago truncatula HOM05D004042 ORTHO05D004552 8.9e-200 700.7 516 69.8
CANSAT56G0725 Cannabis sativa HOM05D004042 ORTHO05D004552 2.6e-199 699.1 553 66.7
Psat1g132200 Pisum sativum HOM05D004042 ORTHO05D004552 4.4e-199 698.4 536 67.9
Nitab4.5_0009216g0010 Nicotiana tabacum HOM05D004042 ORTHO05D004552 7.5e-199 697.6 599 64.4
Phvul.009G230700 Phaseolus vulgaris HOM05D004042 ORTHO05D004552 7.5e-199 697.6 528 68.4
Aqoxy7G01162 Aquilegia oxysepala HOM05D004042 ORTHO05D004552 9.8e-199 697.2 448 76.6
RcHm_v2.0_Chr2g0093781 Rosa chinensis HOM05D004042 ORTHO05D004552 1.7e-198 696.4 517 70.8
Glyma.09G065300 Glycine max HOM05D004042 ORTHO05D004552 2.2e-198 696.0 531 67.8
SGA_v2.0_scaffold91G28060 Striga asiatica HOM05D004042 ORTHO05D004552 2.2e-198 696.0 543 70.7
VMungo1215G0315 Vigna mungo HOM05D004042 ORTHO05D004552 4.9e-198 694.9 420 79.5
TPR.G9438 Trifolium pratense HOM05D004042 ORTHO05D004552 6.3e-198 694.5 513 69.4
Phvul.003G134900 Phaseolus vulgaris HOM05D004042 ORTHO05D004552 8.3e-198 694.1 513 69.0
ClCG11G001680 Citrullus lanatus HOM05D004042 ORTHO05D004552 1.1e-197 693.7 536 67.9
TPR.G29533 Trifolium pratense HOM05D004042 ORTHO05D004552 2.4e-197 692.6 542 67.3
PSO832G2139 Papaver somniferum HOM05D004042 ORTHO05D004552 4.1e-197 691.8 521 68.5
ATR0789G051 Amborella trichopoda HOM05D004042 ORTHO05D004552 1.2e-196 690.3 520 66.9
FvH4_1g07910 Fragaria vesca HOM05D004042 ORTHO05D004552 2.0e-196 689.5 484 72.7
Solyc12g008970.3 Solanum lycopersicum HOM05D004042 ORTHO05D004552 4.5e-196 688.3 499 70.3
PGSC0003DMG400000274 Solanum tuberosum HOM05D004042 ORTHO05D004552 5.9e-196 688.0 438 76.3
Lalb_Chr13g0299591 Lupinus albus HOM05D004042 ORTHO05D004552 1.0e-195 687.2 446 74.0
Lalb_Chr08g0232371 Lupinus albus HOM05D004042 ORTHO05D004552 1.7e-195 686.4 483 70.6
Manes.16G100000 Manihot esculenta HOM05D004042 ORTHO05D004552 1.7e-195 686.4 462 73.6
AT2G19450 Arabidopsis thaliana HOM05D004042 ORTHO05D004552 2.3e-195 686.0 427 78.2
Sopen12g003900 Solanum pennellii HOM05D004042 ORTHO05D004552 2.3e-195 686.0 499 70.1
HanXRQChr03g0060291 Helianthus annuus HOM05D004042 ORTHO05D004552 2.9e-195 685.6 439 76.3
Gorai.001G013100 Gossypium raimondii HOM05D004042 ORTHO05D004552 3.9e-195 685.3 497 70.0
Gohir.D07G012400 Gossypium hirsutum HOM05D004042 ORTHO05D004552 6.6e-195 684.5 497 70.0
ECA234G2403 Erigeron canadensis HOM05D004042 ORTHO05D004552 1.5e-194 683.3 429 77.2
TWI32G1194 Tripterygium wilfordii HOM05D004042 ORTHO05D004552 1.9e-194 682.9 535 66.9
AL3G48800 Arabidopsis lyrata HOM05D004042 ORTHO05D004552 2.5e-194 682.6 506 69.8
A07p01320 Brassica napus HOM05D004042 ORTHO05D004552 2.5e-194 682.6 491 70.9
BraA07t27923Z Brassica rapa HOM05D004042 ORTHO05D004552 2.5e-194 682.6 491 70.9
Lj6g0011849 Lotus japonicus HOM05D004042 ORTHO05D004552 5.6e-194 681.4 533 65.7
Duzib168G0739 Durio zibethinus HOM05D004042 ORTHO05D004552 7.3e-194 681.0 437 76.9
Gohir.A07G012600 Gossypium hirsutum HOM05D004042 ORTHO05D004552 1.2e-193 680.2 497 69.6
C07p02710 Brassica napus HOM05D004042 ORTHO05D004552 6.1e-193 677.9 491 70.9
BolC7t40671H Brassica oleracea HOM05D004042 ORTHO05D004552 6.1e-193 677.9 491 70.9
vmacro17139 Vaccinium macrocarpon HOM05D004042 ORTHO05D004552 6.1e-193 677.9 639 59.9
THA.LOC104814629 Tarenaya hassleriana HOM05D004042 ORTHO05D004552 1.4e-192 676.8 499 69.5
BcaC04g22852 Brassica carinata HOM05D004042 ORTHO05D004552 1.8e-192 676.4 464 73.1
BolC9t54364H Brassica oleracea HOM05D004042 ORTHO05D004552 1.8e-192 676.4 464 73.1
BcaC06g36576 Brassica carinata HOM05D004042 ORTHO05D004552 2.3e-192 676.0 432 75.9
PSO210G6497 Papaver somniferum HOM05D004042 ORTHO05D004552 3.1e-192 675.6 452 75.7
PSO210G1704 Papaver somniferum HOM05D004042 ORTHO05D004552 6.8e-192 674.5 452 75.4
C09p14580 Brassica napus HOM05D004042 ORTHO05D004552 1.5e-191 673.3 502 68.7
BraA09t36880Z Brassica rapa HOM05D004042 ORTHO05D004552 1.5e-191 673.3 502 68.7
CDE05G1317 Ceratophyllum demersum HOM05D004042 ORTHO05D004552 1.5e-191 673.3 536 64.4
Thhalv10022645m.g Eutrema salsugineum HOM05D004042 ORTHO05D004552 2.0e-191 672.9 508 68.5
Os06g0563900 Oryza sativa ssp. japonica HOM05D004042 ORTHO05D004552 3.4e-191 672.2 418 76.8
HPP92_005224 Vanilla planifolia HOM05D004042 ORTHO05D004552 3.4e-191 672.2 531 64.8
Sp3g32820 Schrenkiella parvula HOM05D004042 ORTHO05D004552 4.4e-191 671.8 508 68.3
A09p12360 Brassica napus HOM05D004042 ORTHO05D004552 5.8e-191 671.4 502 68.5
BcaB03g16730 Brassica carinata HOM05D004042 ORTHO05D004552 7.5e-191 671.0 527 66.2
Lj7C679G4 Lonicera japonica HOM05D004042 ORTHO05D004552 1.3e-190 670.2 503 74.2
Carub.0003s3373 Capsella rubella HOM05D004042 ORTHO05D004552 1.7e-190 669.8 530 66.0
CARHR109890 Cardamine hirsuta HOM05D004042 ORTHO05D004552 6.4e-190 667.9 507 68.2
BcaB07g31608 Brassica carinata HOM05D004042 ORTHO05D004552 2.4e-189 666.0 500 67.8
FAN28G1686 Fragaria x ananassa HOM05D004042 ORTHO05D004552 9.2e-189 664.1 481 71.5
FAN26G3195 Fragaria x ananassa HOM05D004042 ORTHO05D004552 2.7e-188 662.5 484 71.1
FAN26G0253 Fragaria x ananassa HOM05D004042 ORTHO05D004552 6.0e-188 661.4 484 71.1
Zm00001eb277490 Zea mays HOM05D004042 ORTHO05D004552 8.6e-187 657.5 421 73.9
TWI63G1034 Tripterygium wilfordii HOM05D004042 ORTHO05D004552 1.1e-186 657.1 502 69.7
FAN19G1831 Fragaria x ananassa HOM05D004042 ORTHO05D004552 2.1e-185 652.9 495 69.3
FAN23G0463 Fragaria x ananassa HOM05D004042 ORTHO05D004552 4.7e-185 651.7 484 71.1
Potri.006G147600 Populus trichocarpa HOM05D004042 ORTHO05D004552 2.2e-182 642.9 475 69.3
Aa31LG8G16450 Aethionema arabicum HOM05D004042 ORTHO05D004552 1.2e-180 637.1 516 66.3
SalBow6G0873 Salvia bowleyana HOM05D004042 ORTHO05D004552 2.1e-180 636.3 555 65.0
Oeu032802.1 Olea europaea HOM05D004042 ORTHO05D004552 4.6e-180 635.2 524 67.0
Dinv36786 Davidia involucrata HOM05D004042 ORTHO05D004552 1.7e-179 633.3 465 73.3
unitig_8.g4318 Utricularia gibba HOM05D004042 ORTHO05D004552 3.0e-179 632.5 526 64.4
Lsat_1_v5_gn_5_143061 Lactuca sativa HOM05D004042 ORTHO05D004552 1.4e-176 623.6 530 64.5
Peaxi162Scf00498g00448 Petunia axillaris HOM05D004042 ORTHO05D004552 2.3e-176 622.9 447 70.7
arahy.Tifrunner.gnm1.ann1.MYU01D Arachis hypogaea HOM05D004042 ORTHO05D004552 2.6e-175 619.4 587 58.6
Os05g0196800 Oryza sativa ssp. japonica HOM05D004042 ORTHO05D004552 2.9e-174 615.9 425 68.9
Nitab4.5_0001519g0080 Nicotiana tabacum HOM05D004042 ORTHO05D004552 1.6e-172 610.1 570 60.9
CAN.G1583.6 Capsicum annuum HOM05D004042 ORTHO05D004552 3.3e-170 602.4 374 75.7
Rhsim05G0016600 Rhododendron simsii HOM05D004042 ORTHO05D004552 1.2e-169 600.5 626 57.7
TAR636G2477 Trochodendron aralioides HOM05D004042 ORTHO05D004552 2.4e-165 586.3 468 65.6
arahy.Tifrunner.gnm1.ann1.MZM9C8 Arachis hypogaea HOM05D004042 ORTHO05D004552 1.6e-164 583.6 599 55.8
HPP92_003981 Vanilla planifolia HOM05D004042 ORTHO05D004552 6.0e-164 581.6 458 64.8
Nitab4.5_0002824g0090 Nicotiana tabacum HOM05D004042 ORTHO05D004552 8.7e-163 577.8 419 70.9
Mapoly0012s0121 Marchantia polymorpha HOM05D004042 ORTHO05D004552 1.9e-162 576.6 519 56.1
arahy.Tifrunner.gnm1.ann1.W5L64F Arachis hypogaea HOM05D004042 ORTHO05D004552 3.6e-161 572.4 510 60.4
SMO356G0470 Selaginella moellendorffii HOM05D004042 ORTHO05D004552 9.0e-160 567.8 418 68.2
Eucgr.C03419 Eucalyptus grandis HOM05D004042 ORTHO05D004552 2.0e-159 566.6 355 78.0
Pp3c15_23830 Physcomitrium patens HOM05D004042 ORTHO05D004552 4.4e-159 565.5 503 57.7
AagrBONN_evm.TU.Sc2ySwM_117.1233 Anthoceros agrestis HOM05D004042 ORTHO05D004552 1.7e-158 563.5 422 64.5
EL10Ac8g19178 Beta vulgaris HOM05D004042 ORTHO05D004552 1.7e-155 553.5 531 57.3
arahy.Tifrunner.gnm1.ann1.5W0QMQ Arachis hypogaea HOM05D004042 ORTHO05D004552 2.3e-155 553.1 509 59.3
AagrBONN_evm.TU.Sc2ySwM_344.3248 Anthoceros agrestis HOM05D004042 ORTHO05D004552 3.3e-154 549.3 467 59.3
DCAR_011961 Daucus carota HOM05D004042 ORTHO05D004552 3.8e-150 535.8 368 71.5
Ca_13125_v3 Cicer arietinum L. HOM05D004042 ORTHO05D004552 8.4e-150 534.6 472 62.5
Manes.03G036000 Manihot esculenta HOM05D004042 ORTHO05D004552 1.4e-149 533.9 494 59.7
Lalb_Chr11g0074521 Lupinus albus HOM05D004042 ORTHO05D004552 3.5e-148 529.3 362 74.0
Sabra18G0058600 Salix brachista HOM05D004042 ORTHO05D004552 5.1e-147 525.4 390 70.8
CSS0045629 Camellia sinensis var. sinensis HOM05D004042 ORTHO05D004552 5.6e-146 521.9 550 56.4
Peaxi162Scf00494g00077 Petunia axillaris HOM05D004042 ORTHO05D004552 5.6e-146 521.9 461 63.3
Nitab4.5_0002642g0100 Nicotiana tabacum HOM05D004042 ORTHO05D004552 2.6e-143 513.1 426 64.6
Sabra06G0116600 Salix brachista HOM05D004042 ORTHO05D004552 2.9e-142 509.6 344 73.5
Zm00001eb284200 Zea mays HOM05D004042 ORTHO05D004552 1.1e-141 507.7 357 70.3
Pp3c9_24440 Physcomitrium patens HOM05D004042 ORTHO05D004552 8.7e-139 498.0 478 55.6
Ca_21290_v3 Cicer arietinum L. HOM05D004042 ORTHO05D004552 2.5e-138 496.5 393 67.2
AUR62029034 Chenopodium quinoa HOM05D004042 ORTHO05D004552 3.0e-131 473.0 350 69.1
Hund25994 Selenicereus undatus HOM05D004042 ORTHO05D004552 5.1e-131 472.2 439 60.1
Hund06663 Selenicereus undatus HOM05D004042 ORTHO05D004552 4.5e-127 459.1 504 53.4
VMungo1309G0638 Vigna mungo HOM05D004042 ORTHO05D004552 2.2e-118 430.3 388 62.4
AagrBONN_evm.TU.Sc2ySwM_344.1721 Anthoceros agrestis HOM05D004042 ORTHO05D004552 1.9e-117 427.2 351 61.0
CDE05G1467 Ceratophyllum demersum HOM05D004042 ORTHO05D004552 2.5e-117 426.8 398 58.5
Sc18g0002260 Simmondsia chinensis HOM05D004042 ORTHO05D004552 1.3e-110 404.4 287 70.4
Hma1.2p1_0672F.1_g201026 Hydrangea macrophylla HOM05D004042 ORTHO05D004552 7.2e-101 372.1 210 82.4
PRCOL_00002371 Prasinoderma coloniale HOM05D004042 ORTHO05D004552 1.3e-94 351.3 434 44.9
PGSC0003DMG400032788 Solanum tuberosum HOM05D004042 ORTHO05D004552 2.9e-78 297.0 300 57.7
Cpa.g.sc737.2 Carica papaya HOM05D004042 ORTHO05D004552 1.9e-72 277.7 149 83.9
AUR62033935 Chenopodium quinoa HOM05D004042 ORTHO05D004552 1.7e-70 271.2 287 56.4
COL.COLO4_18176 Corchorus olitorius HOM05D004042 ORTHO05D004552 1.1e-69 268.5 206 70.4
Lj4C291G3 Lonicera japonica HOM05D004042 ORTHO05D004552 2.8e-68 263.8 315 54.3
SMO361G0462 Selaginella moellendorffii HOM05D004042 ORTHO05D004552 1.2e-66 258.5 193 61.7
Hma1.2p1_0672F.1_g201023 Hydrangea macrophylla HOM05D004042 ORTHO05D004552 1.6e-63 248.1 155 77.4
FAN28G2747 Fragaria x ananassa HOM05D004042 ORTHO05D004552 2.3e-62 244.2 423 40.2
Cre01.g045903 Chlamydomonas reinhardtii HOM05D004042 ORTHO05D004552 2.3e-59 234.2 160 63.1
Haze_27058 Corylus avellana HOM05D004042 ORTHO05D004552 9.9e-58 228.8 405 35.1
Cpa.g.sc737.3 Carica papaya HOM05D004042 ORTHO05D004552 5.6e-53 213.0 222 60.4
Cfa021676 Carpinus fangiana HOM05D004042 ORTHO05D004552 9.3e-48 195.7 455 32.3
PGSC0003DMG400032789 Solanum tuberosum HOM05D004042 ORTHO05D004552 6.0e-47 193.0 104 83.7
Cfa025900 Carpinus fangiana HOM05D004042 ORTHO05D123407 2.5e-21 107.8 186 36.0
Peaxi162Scf00126g01028 Petunia axillaris HOM05D004042 ORTHO05D004552 1.2e-18 99.0 49 87.8
Cfa024924 Carpinus fangiana HOM05D004042 ORTHO05D004552 2.6e-18 97.8 213 32.4
PSO765G0232 Papaver somniferum HOM05D004042 ORTHO05D004552 4.2e-16 90.5 126 48.4
Glyma.15G171700 Glycine max HOM05D004042 ORTHO05D004552 5.5e-16 90.1 51 78.4
Lalb_Chr11g0074531 Lupinus albus HOM05D004042 ORTHO05D004552 1.3e-14 85.5 48 77.1
Sabra18G0058500 Salix brachista HOM05D004042 ORTHO05D004552 1.2e-10 72.4 106 40.6
AUR62029035 Chenopodium quinoa HOM05D004042 ORTHO05D004552 2.2e-09 68.2 38 81.6
SEGI_28032 Sequoiadendron giganteum HOM05D004042 ORTHO05D004552 1.2e-07 62.4 63 46.0
PSO339G6631 Papaver somniferum HOM05D002947 ORTHO05D037275 6.1e-07 60.1 42 66.7
PSO266G0038 Papaver somniferum HOM05D002947 ORTHO05D037275 5.1e-06 57.0 40 67.5


User provided reference genes

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