Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu051245.1 Olea europaea HOM05D000876 ORTHO05D000285 7.1e-127 457.2 223 100.0
Oeu032678.2 Olea europaea HOM05D000876 ORTHO05D000285 1.3e-107 393.3 218 87.6
Dinv34430 Davidia involucrata HOM05D000876 ORTHO05D000285 2.3e-53 213.0 211 52.6
Migut.F01438 Erythranthe guttata HOM05D000876 ORTHO05D000285 2.7e-49 199.5 204 56.9
Actinidia33947 Actinidia chinensis HOM05D000876 ORTHO05D000285 1.3e-48 197.2 211 49.3
CSS0005241 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 1.9e-47 193.4 213 47.4
CSS0003136 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 5.6e-47 191.8 213 46.9
Hma1.2p1_0710F.1_g207390 Hydrangea macrophylla HOM05D000876 ORTHO05D000285 1.8e-45 186.8 211 46.4
GSVIVG01016378001 Vitis vinifera HOM05D000876 ORTHO05D000285 4.9e-43 178.7 212 46.7
Haze_17175 Corylus avellana HOM05D006228 ORTHO05D007847 1.4e-42 177.2 260 41.2
CiPaw.02G189400 Carya illinoinensis HOM05D000876 ORTHO05D000285 4.1e-42 175.6 214 47.7
Rhsim03G0139500 Rhododendron simsii HOM05D000876 ORTHO05D000285 2.7e-41 172.9 217 44.2
Eucgr.G03024 Eucalyptus grandis HOM05D000876 ORTHO05D000285 2.3e-40 169.9 215 42.8
Ciclev10031384m.g Citrus clementina HOM05D000876 ORTHO05D000285 3.0e-40 169.5 215 46.0
QL08p062543 Quercus lobata HOM05D000020 ORTHO05D007189 1.9e-39 166.8 215 42.8
Ca_14593_v3 Cicer arietinum L. HOM05D000665 ORTHO05D000285 3.3e-39 166.0 215 46.0
MD01G1146000 Malus domestica HOM05D000876 ORTHO05D000285 7.3e-39 164.9 208 43.3
TPR.G29813 Trifolium pratense HOM05D004575 ORTHO05D005774 2.1e-38 163.3 215 44.7
Lalb_Chr20g0116631 Lupinus albus HOM05D000876 ORTHO05D000285 2.8e-38 162.9 214 45.3
Psat5g127400 Pisum sativum HOM05D000665 ORTHO05D000285 8.1e-38 161.4 215 45.1
Lj6g0013767 Lotus japonicus HOM05D000876 ORTHO05D000285 1.8e-37 160.2 210 45.7
VMungo1383G2642 Vigna mungo HOM05D000665 ORTHO05D000285 5.2e-37 158.7 216 44.9
RcHm_v2.0_Chr1g0369261 Rosa chinensis HOM05D000876 ORTHO05D000285 6.9e-37 158.3 208 44.2
FAN10G0150 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.2e-36 157.5 207 44.4
Glyma.18G030600 Glycine max HOM05D000665 ORTHO05D000285 1.2e-36 157.5 216 43.5
Prupe.2G245300 Prunus persica HOM05D000876 ORTHO05D000285 1.2e-36 157.5 208 42.3
Cpa.g.sc19.224 Carica papaya HOM05D000876 ORTHO05D000285 2.0e-36 156.8 209 44.0
FvH4_7g23930 Fragaria vesca HOM05D000876 ORTHO05D000285 2.6e-36 156.4 207 44.4
FAN01G0349 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.6e-36 156.4 207 44.4
FAN06G2005 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.6e-36 156.4 207 44.4
Medtr3g070080 Medicago truncatula HOM05D000665 ORTHO05D000285 9.9e-36 154.5 215 43.3
AT5G05800 Arabidopsis thaliana HOM05D000876 ORTHO05D000285 1.7e-35 153.7 218 43.1
Atru.chr12.253 Acer truncatum HOM05D000876 ORTHO05D000285 8.4e-35 151.4 214 40.2
Glyma.11G226600 Glycine max HOM05D000665 ORTHO05D000285 1.1e-34 151.0 215 40.9
THA.LOC104816562 Tarenaya hassleriana HOM05D000876 ORTHO05D000285 3.2e-34 149.4 228 41.7
Phvul.001G240000 Phaseolus vulgaris HOM05D000665 ORTHO05D000285 9.3e-34 147.9 215 43.3
AL6G15700 Arabidopsis lyrata HOM05D000876 ORTHO05D000285 1.7e-32 143.7 213 39.4
THA.LOC104823140 Tarenaya hassleriana HOM05D000876 ORTHO05D000285 3.0e-32 142.9 229 38.9
Aa31LG11G6810 Aethionema arabicum HOM05D000876 ORTHO05D000285 6.6e-32 141.7 210 41.0
Carub.0006s0470 Capsella rubella HOM05D000876 ORTHO05D000285 1.9e-31 140.2 212 41.0
CARHR207460 Cardamine hirsuta HOM05D000876 ORTHO05D000285 5.6e-31 138.7 211 42.7
Sp6g37100 Schrenkiella parvula HOM05D000876 ORTHO05D000285 2.8e-30 136.3 213 39.9
Aa31LG3G4690 Aethionema arabicum HOM05D000876 ORTHO05D000285 6.2e-30 135.2 224 40.6
BcaC06g32288 Brassica carinata HOM05D000876 ORTHO05D000285 1.8e-29 133.7 205 38.5
Thhalv10015821m.g Eutrema salsugineum HOM05D000876 ORTHO05D000285 3.1e-29 132.9 206 38.3
C09p71030 Brassica napus HOM05D000876 ORTHO05D000285 1.5e-28 130.6 205 38.5
BolC9t59867H Brassica oleracea HOM05D000876 ORTHO05D000285 1.5e-28 130.6 205 38.5
BraA10t45098Z Brassica rapa HOM05D000876 ORTHO05D000285 5.8e-28 128.6 205 39.5
BcaB04g21141 Brassica carinata HOM05D000095 ORTHO05D000285 2.9e-27 126.3 235 37.0
Sp3g09570 Schrenkiella parvula HOM05D000876 ORTHO05D000285 2.9e-27 126.3 232 38.4
BraA01t04190Z Brassica rapa HOM05D000876 ORTHO05D000285 1.9e-26 123.6 245 38.4
A10p30570 Brassica napus HOM05D000876 ORTHO05D000285 3.5e-25 119.4 205 36.6
BcaNung06184 Brassica carinata HOM05D000876 ORTHO05D000285 4.6e-25 119.0 205 36.6
BolC1t05323H Brassica oleracea HOM05D000876 ORTHO05D000285 4.6e-25 119.0 244 36.5
Lj1C949T7 Lonicera japonica HOM05D000876 ORTHO05D000285 1.3e-24 117.5 94 62.8
AT3G11290 Arabidopsis thaliana HOM05D000876 ORTHO05D000285 5.1e-24 115.5 221 36.2
AT2G19220 Arabidopsis thaliana HOM05D000876 ORTHO05D000285 8.7e-24 114.8 212 35.8
BcaC09g48165 Brassica carinata HOM05D000876 ORTHO05D000285 8.7e-24 114.8 259 34.4
CARHR085850 Cardamine hirsuta HOM05D000876 ORTHO05D000285 8.7e-24 114.8 230 34.3
AL3G22820 Arabidopsis lyrata HOM05D000876 ORTHO05D000285 2.5e-23 113.2 222 35.1
Carub.0003s1061 Capsella rubella HOM05D000876 ORTHO05D000285 1.6e-22 110.5 233 33.5
Carub.0003s3346 Capsella rubella HOM05D000876 ORTHO05D000285 3.6e-22 109.4 211 34.1
Carub.0003s1062 Capsella rubella HOM05D000876 ORTHO05D000285 2.9e-19 99.8 204 30.9
Actinidia29672 Actinidia chinensis HOM05D000020 ORTHO05D007189 4.8e-14 82.4 98 45.9
AT3G11310 Arabidopsis thaliana HOM05D000876 ORTHO05D000285 5.8e-12 75.5 287 23.3
Nn8g39983 Nelumbo nucifera HOM05D000876 ORTHO05D000285 1.4e-10 70.9 233 24.9
Aqoxy4G02707 Aquilegia oxysepala HOM05D000876 ORTHO05D000285 2.5e-10 70.1 222 25.7
AL3G52710 Arabidopsis lyrata HOM05D000876 ORTHO05D000285 2.1e-09 67.0 75 45.3
Thhalv10020614m.g Eutrema salsugineum HOM05D000876 ORTHO05D000285 6.0e-09 65.5 62 48.4
Lj2g0027355 Lotus japonicus HOM05D000665 ORTHO05D003147 7.9e-09 65.1 213 24.9
Medtr5g022570 Medicago truncatula HOM05D000665 ORTHO05D003147 1.0e-08 64.7 208 29.3
CSS0033511 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 1.3e-08 64.3 209 27.8
Glyma.11G078600 Glycine max HOM05D000665 ORTHO05D003147 1.3e-08 64.3 216 24.5
RcHm_v2.0_Chr2g0099061 Rosa chinensis HOM05D000665 ORTHO05D003147 1.8e-08 63.9 222 24.8
CSS0021579 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 2.3e-08 63.5 196 26.5
FvH4_7g08972 Fragaria vesca HOM05D000876 ORTHO05D000285 2.3e-08 63.5 221 25.8
FAN03G2155 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.3e-08 63.5 221 25.8
Hund23719 Selenicereus undatus HOM05D000876 ORTHO05D000285 2.3e-08 63.5 256 22.3
CANSAT11G0869 Cannabis sativa HOM05D000876 ORTHO05D000285 3.0e-08 63.2 216 27.3
CANSAT64G0985 Cannabis sativa HOM05D000876 ORTHO05D000285 3.0e-08 63.2 216 27.3
FvH4_6g39920 Fragaria vesca HOM05D000876 ORTHO05D000285 3.0e-08 63.2 221 25.8
CANSAT21G1745 Cannabis sativa HOM05D000876 ORTHO05D000285 3.9e-08 62.8 218 28.0
FvH4_7g12221 Fragaria vesca HOM05D000876 ORTHO05D000285 5.1e-08 62.4 221 25.8
FAN09G4256 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.1e-08 62.4 223 25.1
Ah.03g141330 Amaranthus hybridus HOM05D000876 ORTHO05D000285 8.7e-08 61.6 221 23.1
Ah.10g031690 Amaranthus hybridus HOM05D000034 ORTHO05D000285 8.7e-08 61.6 221 23.1
CANSAT25G2261 Cannabis sativa HOM05D000876 ORTHO05D000285 8.7e-08 61.6 218 28.0
Phvul.002G106800 Phaseolus vulgaris HOM05D000665 ORTHO05D003147 8.7e-08 61.6 219 25.6
Glyma.01G164400 Glycine max HOM05D000665 ORTHO05D003147 1.1e-07 61.2 221 24.9
CANSAT11G0810 Cannabis sativa HOM05D000876 ORTHO05D000285 1.9e-07 60.5 218 28.0
FAN05G1224 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.5e-07 60.1 221 24.9
Nitab4.5_0000188g0150 Nicotiana tabacum HOM05D000665 ORTHO05D003147 2.5e-07 60.1 202 28.2
SHI10897 Sapria himalayana HOM05D007516 ORTHO05D000285 2.5e-07 60.1 203 23.6
SHI38234 Sapria himalayana HOM05D007516 ORTHO05D000285 2.5e-07 60.1 203 23.6
SHI03289 Sapria himalayana HOM05D007516 ORTHO05D000285 3.3e-07 59.7 203 23.6
Nitab4.5_0002337g0110 Nicotiana tabacum HOM05D000665 ORTHO05D003147 4.3e-07 59.3 202 28.2
TAR164G0004 Trochodendron aralioides HOM05D000876 ORTHO05D000285 4.3e-07 59.3 207 22.2
arahy.Tifrunner.gnm1.ann1.BDR352 Arachis hypogaea HOM05D000665 ORTHO05D003147 5.7e-07 58.9 214 28.5
arahy.Tifrunner.gnm1.ann1.Q4VSGN Arachis hypogaea HOM05D000665 ORTHO05D003147 5.7e-07 58.9 214 28.5
Hma1.2p1_0148F.1_g066070 Hydrangea macrophylla HOM05D000876 ORTHO05D000285 7.4e-07 58.5 207 26.1
Hma1.2p1_0148F.1_g066080 Hydrangea macrophylla HOM05D000876 ORTHO05D000285 7.4e-07 58.5 207 26.1
PSO724G0339 Papaver somniferum HOM05D003171 ORTHO05D000921 9.6e-07 58.2 233 27.5
TPR.G10520 Trifolium pratense HOM05D000665 ORTHO05D003147 9.6e-07 58.2 207 27.1
FAN22G0137 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.3e-06 57.8 211 26.5
Psat0s6520g0080 Pisum sativum HOM05D000665 ORTHO05D003147 1.3e-06 57.8 213 24.9
Psat2g153240 Pisum sativum HOM05D000665 ORTHO05D003147 1.3e-06 57.8 213 24.9
SGA_v2.0_scaffold136G35048 Striga asiatica HOM05D045704 ORTHO05D000285 1.6e-06 57.4 187 27.3
vmacro11323 Vaccinium macrocarpon HOM05D009321 ORTHO05D000285 1.6e-06 57.4 206 23.8
HPP92_027007 Vanilla planifolia HOM05D000876 ORTHO05D000285 1.6e-06 57.4 215 27.0
GSVIVG01023166001 Vitis vinifera HOM05D007516 ORTHO05D000285 1.6e-06 57.4 212 22.6
arahy.Tifrunner.gnm1.ann1.D3784E Arachis hypogaea HOM05D000034 ORTHO05D000037 2.1e-06 57.0 195 25.6
Ca_24919_v3 Cicer arietinum L. HOM05D000665 ORTHO05D003147 2.1e-06 57.0 211 28.0
HPP92_018135 Vanilla planifolia HOM05D000876 ORTHO05D000285 2.1e-06 57.0 232 24.1
Prupe.5G020800 Prunus persica HOM05D000876 ORTHO05D000285 3.7e-06 56.2 224 25.0
SHI43640 Sapria himalayana HOM05D007516 ORTHO05D000285 3.7e-06 56.2 203 22.7
Hund08047 Selenicereus undatus HOM05D000876 ORTHO05D002662 3.7e-06 56.2 55 40.0
VMungo0647G0204 Vigna mungo HOM05D001045 ORTHO05D003147 3.7e-06 56.2 76 38.2
Oeu020877.2 Olea europaea HOM05D000665 ORTHO05D003147 4.8e-06 55.8 82 35.4
Prupe.7G171400 Prunus persica HOM05D000665 ORTHO05D003147 4.8e-06 55.8 219 23.7
HPP92_015385 Vanilla planifolia HOM05D000876 ORTHO05D000285 4.8e-06 55.8 215 26.5
CANSAT25G1420 Cannabis sativa HOM05D000665 ORTHO05D003147 6.3e-06 55.5 211 27.0
CAN.G576.1 Capsicum annuum HOM05D000665 ORTHO05D003147 6.3e-06 55.5 213 25.8
RcHm_v2.0_Chr4g0428601 Rosa chinensis HOM05D000876 ORTHO05D000285 6.3e-06 55.5 229 22.7
Hund08681 Selenicereus undatus HOM05D000876 ORTHO05D000285 6.3e-06 55.5 81 33.3
Hund14971 Selenicereus undatus HOM05D000876 ORTHO05D000285 6.3e-06 55.5 249 22.9
TAR371G1073 Trochodendron aralioides HOM05D011286 ORTHO05D000285 6.3e-06 55.5 193 24.4
AUR62036171 Chenopodium quinoa HOM05D000665 ORTHO05D003147 8.2e-06 55.1 82 39.0
PSO170G3394 Papaver somniferum HOM05D003171 ORTHO05D000921 8.2e-06 55.1 233 26.6
PSO700G0266 Papaver somniferum HOM05D003171 ORTHO05D000921 8.2e-06 55.1 233 26.6


User provided reference genes

Program Settings