Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu051243.1 Olea europaea HOM05D005253 ORTHO05D006058 1.6e-43 179.1 94 100.0
MSTRG.9581 Avicennia marina HOM05D005253 ORTHO05D006058 6.5e-21 104.0 92 62.0
Cc04_g08280 Coffea canephora HOM05D005253 ORTHO05D006058 7.1e-20 100.5 89 59.6
SGA_v2.0_scaffold65G22104 Striga asiatica HOM05D005253 ORTHO05D006058 1.6e-19 99.4 92 64.1
SalBow7G2030 Salvia bowleyana HOM05D005253 ORTHO05D006058 8.7e-18 93.6 92 56.5
Prupe.8G074000 Prunus persica HOM05D005253 ORTHO05D006058 1.5e-17 92.8 88 58.0
GSVIVG01008154001 Vitis vinifera HOM05D005253 ORTHO05D006058 1.9e-17 92.4 89 53.9
Oeu014427.1 Olea europaea HOM05D005253 ORTHO05D006058 2.5e-17 92.0 87 59.8
RcHm_v2.0_Chr7g0183731 Rosa chinensis HOM05D005253 ORTHO05D006058 2.5e-17 92.0 88 56.8
TWI60G1362 Tripterygium wilfordii HOM05D005253 ORTHO05D006058 9.7e-17 90.1 89 51.7
Rhsim08G0142100 Rhododendron simsii HOM05D005253 ORTHO05D006058 1.6e-16 89.4 88 52.3
Dinv38642 Davidia involucrata HOM05D005253 ORTHO05D006058 2.8e-16 88.6 88 54.5
Haze_18511 Corylus avellana HOM05D005253 ORTHO05D006058 4.8e-16 87.8 89 52.8
FAN08G1625 Fragaria x ananassa HOM05D005253 ORTHO05D006058 4.8e-16 87.8 88 54.5
Prupe.5G210000 Prunus persica HOM05D005253 ORTHO05D006058 4.8e-16 87.8 88 55.7
Cfa017731 Carpinus fangiana HOM05D005253 ORTHO05D006058 6.3e-16 87.4 89 52.8
Glyma.17G081700 Glycine max HOM05D005253 ORTHO05D006058 1.1e-15 86.7 89 49.4
FvH4_5g13401 Fragaria vesca HOM05D005253 ORTHO05D006058 1.4e-15 86.3 88 53.4
Glyma.05G018200 Glycine max HOM05D005253 ORTHO05D006058 1.4e-15 86.3 89 49.4
arahy.Tifrunner.gnm1.ann1.TSF3K2 Arachis hypogaea HOM05D005253 ORTHO05D006058 1.8e-15 85.9 89 49.4
arahy.Tifrunner.gnm1.ann1.399KXC Arachis hypogaea HOM05D005253 ORTHO05D006058 2.4e-15 85.5 89 49.4
Ca_21755_v3 Cicer arietinum L. HOM05D005253 ORTHO05D006058 3.1e-15 85.1 86 51.2
Gohir.D07G063700 Gossypium hirsutum HOM05D005253 ORTHO05D006058 3.1e-15 85.1 89 49.4
Gorai.001G067300 Gossypium raimondii HOM05D005253 ORTHO05D006058 3.1e-15 85.1 89 49.4
Nn4g23536 Nelumbo nucifera HOM05D005253 ORTHO05D006058 3.1e-15 85.1 89 53.9
Cpa.g.sc3.232 Carica papaya HOM05D005253 ORTHO05D006058 4.1e-15 84.7 89 51.7
MD06G1205700 Malus domestica HOM05D005253 ORTHO05D006058 4.1e-15 84.7 88 53.4
Hund09956 Selenicereus undatus HOM05D005253 ORTHO05D006058 4.1e-15 84.7 89 50.6
Sc04g0003900 Simmondsia chinensis HOM05D005253 ORTHO05D006058 4.1e-15 84.7 87 49.4
FAN13G1214 Fragaria x ananassa HOM05D005253 ORTHO05D006058 5.3e-15 84.3 89 51.7
QL10p020742 Quercus lobata HOM05D005253 ORTHO05D006058 6.9e-15 84.0 87 54.0
Lj4g0025893 Lotus japonicus HOM05D005253 ORTHO05D006058 9.0e-15 83.6 89 48.3
Psat4g046080 Pisum sativum HOM05D005253 ORTHO05D006058 9.0e-15 83.6 86 52.3
Lalb_Chr13g0302681 Lupinus albus HOM05D005253 ORTHO05D006058 1.5e-14 82.8 88 47.7
Medtr4g109960 Medicago truncatula HOM05D005253 ORTHO05D006058 1.5e-14 82.8 89 47.2
TWI81G0215 Tripterygium wilfordii HOM05D005253 ORTHO05D006058 1.5e-14 82.8 89 44.9
Gohir.A09G243900 Gossypium hirsutum HOM05D005253 ORTHO05D006058 2.0e-14 82.4 89 48.3
TPR.G2086 Trifolium pratense HOM05D005253 ORTHO05D006058 2.0e-14 82.4 86 50.0
Lj1g0009577 Lotus japonicus HOM05D005253 ORTHO05D006058 3.4e-14 81.6 90 50.0
Peaxi162Scf00365g00114 Petunia axillaris HOM05D005253 ORTHO05D006058 3.4e-14 81.6 88 51.1
vmacro17641 Vaccinium macrocarpon HOM05D005253 ORTHO05D006058 4.5e-14 81.3 88 50.0
Gorai.006G268700 Gossypium raimondii HOM05D005253 ORTHO05D006058 5.9e-14 80.9 89 47.2
TPR.G1989 Trifolium pratense HOM05D005253 ORTHO05D006058 7.7e-14 80.5 86 48.8
Ah.02g114240 Amaranthus hybridus HOM05D005253 ORTHO05D006058 1.0e-13 80.1 87 54.0
AUR62039667 Chenopodium quinoa HOM05D005253 ORTHO05D006058 2.2e-13 79.0 85 48.2
AUR62032138 Chenopodium quinoa HOM05D005253 ORTHO05D006058 2.9e-13 78.6 85 48.2
EL10Ac5g11189 Beta vulgaris HOM05D005253 ORTHO05D006058 3.8e-13 78.2 87 47.1
Migut.D01615 Erythranthe guttata HOM05D005253 ORTHO05D006058 3.8e-13 78.2 90 52.2
PGR044G0085 Punica granatum HOM05D005253 ORTHO05D006058 5.0e-13 77.8 87 48.3
Duzib068G0534 Durio zibethinus HOM05D005253 ORTHO05D006058 6.5e-13 77.4 89 47.2
SHI17413 Sapria himalayana HOM05D005253 ORTHO05D006058 6.5e-13 77.4 88 51.1
Nitab4.5_0002041g0040 Nicotiana tabacum HOM05D005253 ORTHO05D006058 8.5e-13 77.0 91 47.3
FAN18G4071 Fragaria x ananassa HOM05D005253 ORTHO05D006058 1.4e-12 76.3 104 45.2
MD14G1216600 Malus domestica HOM05D005253 ORTHO05D006058 1.9e-12 75.9 88 48.9
VMungo1215G3162 Vigna mungo HOM05D005253 ORTHO05D006058 2.5e-12 75.5 89 44.9
Nitab4.5_0005994g0050 Nicotiana tabacum HOM05D005253 ORTHO05D006058 3.2e-12 75.1 86 50.0
Ah.11g047400 Amaranthus hybridus HOM05D005253 ORTHO05D006058 4.2e-12 74.7 87 49.4
CAN.G982.39 Capsicum annuum HOM05D005253 ORTHO05D006058 5.5e-12 74.3 86 50.0
Phvul.003G182200 Phaseolus vulgaris HOM05D005253 ORTHO05D006058 5.5e-12 74.3 89 46.1
Sopen03g033840 Solanum pennellii HOM05D005253 ORTHO05D006058 5.5e-12 74.3 87 47.1
Ciclev10020920m.g Citrus clementina HOM05D005253 ORTHO05D006058 9.4e-12 73.6 92 42.4
Hund02544 Selenicereus undatus HOM05D005253 ORTHO05D006058 9.4e-12 73.6 87 48.3
Solyc03g114760.3 Solanum lycopersicum HOM05D005253 ORTHO05D006058 9.4e-12 73.6 87 47.1
THA.LOC104818357 Tarenaya hassleriana HOM05D005253 ORTHO05D006058 9.4e-12 73.6 87 47.1
Aqoxy3G03749 Aquilegia oxysepala HOM05D005253 ORTHO05D006058 1.2e-11 73.2 88 48.9
C09p68830 Brassica napus HOM05D005253 ORTHO05D006058 1.2e-11 73.2 89 44.9
Glyma.04G159100 Glycine max HOM05D005253 ORTHO05D006058 1.2e-11 73.2 92 42.4
Nitab4.5_0002467g0110 Nicotiana tabacum HOM05D005253 ORTHO05D006058 2.1e-11 72.4 87 47.1
BcaB08g37286 Brassica carinata HOM05D005460 ORTHO05D006058 2.7e-11 72.0 89 44.9
BolC9t59630H Brassica oleracea HOM05D005253 ORTHO05D006058 2.7e-11 72.0 89 44.9
Thhalv10014100m.g Eutrema salsugineum HOM05D005253 ORTHO05D006058 2.7e-11 72.0 89 44.9
Sed0023471 Sechium edule HOM05D005253 ORTHO05D006058 2.7e-11 72.0 90 45.6
BcaB08g37285 Brassica carinata HOM05D005253 ORTHO05D006058 3.6e-11 71.6 89 43.8
Lsat_1_v5_gn_5_23380 Lactuca sativa HOM05D005253 ORTHO05D006058 3.6e-11 71.6 89 43.8
Nitab4.5_0001797g0020 Nicotiana tabacum HOM05D005253 ORTHO05D006058 4.6e-11 71.2 90 46.7
Peaxi162Scf00017g03254 Petunia axillaris HOM05D005253 ORTHO05D006058 4.6e-11 71.2 91 44.0
A10p28550 Brassica napus HOM05D005253 ORTHO05D006058 6.1e-11 70.9 89 43.8
BraA10t44904Z Brassica rapa HOM05D005253 ORTHO05D006058 6.1e-11 70.9 89 43.8
CARHR205070 Cardamine hirsuta HOM05D005253 ORTHO05D006058 6.1e-11 70.9 89 43.8
PSO017G7367 Papaver somniferum HOM05D005253 ORTHO05D006058 7.9e-11 70.5 88 47.7
PSO478G2666 Papaver somniferum HOM05D005253 ORTHO05D006058 7.9e-11 70.5 88 47.7
Sp6g34840 Schrenkiella parvula HOM05D005253 ORTHO05D006058 1.0e-10 70.1 89 43.8
arahy.Tifrunner.gnm1.ann1.U6KDHT Arachis hypogaea HOM05D005253 ORTHO05D006058 1.4e-10 69.7 89 46.1
PGSC0003DMG400024524 Solanum tuberosum HOM05D005253 ORTHO05D006058 1.8e-10 69.3 87 43.7
Eucgr.K02550 Eucalyptus grandis HOM05D005253 ORTHO05D006058 2.3e-10 68.9 89 46.1
AT5G08120 Arabidopsis thaliana HOM05D005253 ORTHO05D006058 3.0e-10 68.6 86 44.2
unitig_578.g15937 Utricularia gibba HOM05D005253 ORTHO05D006058 8.8e-10 67.0 92 43.5
AL6G18490 Arabidopsis lyrata HOM05D005253 ORTHO05D006058 1.5e-09 66.2 86 41.9
arahy.Tifrunner.gnm1.ann1.4B3W67 Arachis hypogaea HOM05D005253 ORTHO05D006058 1.5e-09 66.2 88 45.5
COL.COLO4_27496 Corchorus olitorius HOM05D005253 ORTHO05D006058 2.5e-09 65.5 89 38.2
ClCG04G011560 Citrullus lanatus HOM05D005253 ORTHO05D006058 4.3e-09 64.7 88 40.9
Carub.0006s0700 Capsella rubella HOM05D005253 ORTHO05D006058 5.7e-09 64.3 86 44.2
MBI14_g08108_MAGBIO Magnolia biondii HOM05D005253 ORTHO05D006058 7.4e-09 63.9 87 42.5
ECA246G0831 Erigeron canadensis HOM05D005253 ORTHO05D006058 2.2e-08 62.4 91 40.7
Gohir.D09G244600 Gossypium hirsutum HOM05D005253 ORTHO05D006058 4.8e-08 61.2 89 39.3
MELO3C002054.2 Cucumis melo HOM05D005253 ORTHO05D006058 6.3e-08 60.8 87 41.4
Thecc.03G108400 Theobroma cacao HOM05D005253 ORTHO05D006058 6.3e-08 60.8 89 38.2
unitig_8.g4498 Utricularia gibba HOM05D005253 ORTHO05D006058 1.4e-07 59.7 90 42.2
Aa31LG3G18420 Aethionema arabicum HOM05D005253 ORTHO05D006058 2.4e-07 58.9 89 36.0
CSS0036905 Camellia sinensis var. sinensis HOM05D005253 ORTHO05D006058 2.4e-07 58.9 91 37.4
Atru.chr4.1592 Acer truncatum HOM05D005253 ORTHO05D006058 3.1e-07 58.5 88 39.8
Gohir.A07G058832 Gossypium hirsutum HOM05D005253 ORTHO05D006058 4.1e-07 58.2 89 38.2
CANSAT80G0823 Cannabis sativa HOM05D005253 ORTHO05D006058 9.1e-07 57.0 90 38.9
CiPaw.16G080100 Carya illinoinensis HOM05D005253 ORTHO05D006058 1.5e-06 56.2 89 39.3
TAR629G1609 Trochodendron aralioides HOM05D004464 ORTHO05D005135 2.0e-06 55.8 89 37.1


User provided reference genes

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