Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu051222.1 Olea europaea HOM05D006758 ORTHO05D008326 1.0e-53 213.0 97 100.0
Oeu037351.1 Olea europaea HOM05D006758 ORTHO05D008326 1.7e-48 195.7 91 96.7
SGA_v2.0_scaffold7G03879 Striga asiatica HOM05D006758 ORTHO05D008326 1.6e-46 189.1 91 92.3
Cc02_g11670 Coffea canephora HOM05D006758 ORTHO05D008326 4.6e-46 187.6 95 91.6
ClCG01G022160 Citrullus lanatus HOM05D006758 ORTHO05D008326 6.0e-46 187.2 96 87.5
arahy.Tifrunner.gnm1.ann1.ND4ZK6 Arachis hypogaea HOM05D006758 ORTHO05D008326 1.0e-45 186.4 91 92.3
Phvul.007G052700 Phaseolus vulgaris HOM05D006758 ORTHO05D008326 1.0e-45 186.4 91 92.3
Migut.M01286 Erythranthe guttata HOM05D006758 ORTHO05D008326 2.3e-45 185.3 91 90.1
Ca_10997_v3 Cicer arietinum L. HOM05D006758 ORTHO05D008326 3.0e-45 184.9 91 91.2
Lj5g0020351 Lotus japonicus HOM05D006758 ORTHO05D008326 3.9e-45 184.5 91 90.1
TPR.G5478 Trifolium pratense HOM05D006758 ORTHO05D008326 3.9e-45 184.5 91 91.2
Ciclev10017296m.g Citrus clementina HOM05D006758 ORTHO05D008326 5.1e-45 184.1 91 91.2
Gohir.A06G207900 Gossypium hirsutum HOM05D006758 ORTHO05D008326 5.1e-45 184.1 91 90.1
Gorai.010G252900 Gossypium raimondii HOM05D006758 ORTHO05D008326 5.1e-45 184.1 91 90.1
PGR004G2441 Punica granatum HOM05D006758 ORTHO05D008326 5.1e-45 184.1 91 92.3
Rhsim02G0111700 Rhododendron simsii HOM05D006758 ORTHO05D008326 5.1e-45 184.1 91 91.2
THA.LOC104809516 Tarenaya hassleriana HOM05D006758 ORTHO05D008326 5.1e-45 184.1 91 91.2
Thecc.06G214600 Theobroma cacao HOM05D006758 ORTHO05D008326 5.1e-45 184.1 91 90.1
Dinv17829 Davidia involucrata HOM05D006758 ORTHO05D008326 6.6e-45 183.7 92 90.2
Duzib235G1228 Durio zibethinus HOM05D006758 ORTHO05D008326 6.6e-45 183.7 91 90.1
Glyma.10G251800 Glycine max HOM05D006758 ORTHO05D008326 6.6e-45 183.7 91 91.2
Glyma.20G141700 Glycine max HOM05D006758 ORTHO05D008326 6.6e-45 183.7 91 91.2
GSVIVG01012634001 Vitis vinifera HOM05D006758 ORTHO05D008326 6.6e-45 183.7 91 91.2
Dinv20021 Davidia involucrata HOM05D006758 ORTHO05D008326 1.1e-44 183.0 91 89.0
Duzib192G0534 Durio zibethinus HOM05D006758 ORTHO05D008326 1.1e-44 183.0 91 90.1
MD05G1341600 Malus domestica HOM05D006758 ORTHO05D008326 1.5e-44 182.6 91 91.2
CANSAT56G2354 Cannabis sativa HOM05D006758 ORTHO05D008326 2.5e-44 181.8 91 90.1
COL.COLO4_31733 Corchorus olitorius HOM05D006758 ORTHO05D008326 2.5e-44 181.8 91 89.0
Eucgr.D01293 Eucalyptus grandis HOM05D006758 ORTHO05D008326 2.5e-44 181.8 91 90.1
Lalb_Chr06g0164881 Lupinus albus HOM05D006758 ORTHO05D008326 2.5e-44 181.8 91 90.1
Nitab4.5_0002347g0160 Nicotiana tabacum HOM05D006758 ORTHO05D008326 2.5e-44 181.8 91 90.1
Nitab4.5_0008530g0010 Nicotiana tabacum HOM05D006758 ORTHO05D008326 2.5e-44 181.8 91 90.1
Potri.004G021200 Populus trichocarpa HOM05D006758 ORTHO05D008326 2.5e-44 181.8 91 90.1
Sabra04G0011700 Salix brachista HOM05D006758 ORTHO05D008326 2.5e-44 181.8 91 90.1
TAR626G1807 Trochodendron aralioides HOM05D006758 ORTHO05D008326 2.5e-44 181.8 89 89.9
CiPaw.09G087600 Carya illinoinensis HOM05D006758 ORTHO05D008326 3.3e-44 181.4 91 90.1
Prupe.4G025700 Prunus persica HOM05D006758 ORTHO05D008326 3.3e-44 181.4 91 90.1
MD10G1315000 Malus domestica HOM05D006758 ORTHO05D008326 4.3e-44 181.0 91 91.2
PSO210G7269 Papaver somniferum HOM05D006758 ORTHO05D008326 4.3e-44 181.0 91 89.0
PSO832G0089 Papaver somniferum HOM05D006758 ORTHO05D008326 4.3e-44 181.0 91 89.0
Psat0s2691g0120 Pisum sativum HOM05D006758 ORTHO05D008326 4.3e-44 181.0 91 89.0
EL10Ac8g19995 Beta vulgaris HOM05D006758 ORTHO05D008326 5.6e-44 180.6 91 89.0
MELO3C007373.2 Cucumis melo HOM05D006758 ORTHO05D008326 5.6e-44 180.6 91 90.1
CsaV3_6G049220 Cucumis sativus L. HOM05D006758 ORTHO05D008326 5.6e-44 180.6 91 90.1
SHI02162 Sapria himalayana HOM05D006758 ORTHO05D008326 7.3e-44 180.3 92 87.0
Manes.17G035700 Manihot esculenta HOM05D006758 ORTHO05D008326 9.6e-44 179.9 91 89.0
TAR624G0544 Trochodendron aralioides HOM05D006758 ORTHO05D008326 9.6e-44 179.9 91 89.0
CAN.G569.41 Capsicum annuum HOM05D006758 ORTHO05D008326 1.2e-43 179.5 91 89.0
CDE05G3555 Ceratophyllum demersum HOM05D006758 ORTHO05D008326 1.2e-43 179.5 91 87.9
Gorai.006G083800 Gossypium raimondii HOM05D006758 ORTHO05D008326 1.2e-43 179.5 93 86.0
Nn1g03624 Nelumbo nucifera HOM05D006758 ORTHO05D008326 1.2e-43 179.5 91 87.9
Solyc02g080140.4 Solanum lycopersicum HOM05D006758 ORTHO05D008326 1.2e-43 179.5 91 89.0
Sopen02g024850 Solanum pennellii HOM05D006758 ORTHO05D008326 1.2e-43 179.5 91 89.0
Zm00001eb413280 Zea mays HOM05D006758 ORTHO05D008326 1.2e-43 179.5 91 89.0
Hma1.2p1_2726F.1_g327620 Hydrangea macrophylla HOM05D006758 ORTHO05D008326 1.6e-43 179.1 91 87.9
Os08g0190800 Oryza sativa ssp. japonica HOM05D006758 ORTHO05D008326 1.6e-43 179.1 91 87.9
Hma1.2p1_2714F.1_g327410 Hydrangea macrophylla HOM05D006758 ORTHO05D008326 2.1e-43 178.7 91 87.9
arahy.Tifrunner.gnm1.ann1.GJ8XD1 Arachis hypogaea HOM05D006758 ORTHO05D008326 2.8e-43 178.3 102 82.4
Gohir.A09G069700 Gossypium hirsutum HOM05D006758 ORTHO05D008326 3.6e-43 177.9 91 87.9
Gohir.D09G069600 Gossypium hirsutum HOM05D006758 ORTHO05D008326 3.6e-43 177.9 91 87.9
Sed0024295 Sechium edule HOM05D006758 ORTHO05D008326 4.7e-43 177.6 91 87.9
Thhalv10023778m.g Eutrema salsugineum HOM05D006758 ORTHO05D008326 8.1e-43 176.8 93 87.1
BcaC04g22349 Brassica carinata HOM05D006758 ORTHO05D008326 1.1e-42 176.4 93 87.1
C09p20260 Brassica napus HOM05D006758 ORTHO05D008326 1.1e-42 176.4 93 87.1
BolC9t54931H Brassica oleracea HOM05D006758 ORTHO05D008326 1.1e-42 176.4 93 87.1
Carub.0002s0329 Capsella rubella HOM05D006758 ORTHO05D008326 1.1e-42 176.4 93 87.1
DCAR_008127 Daucus carota HOM05D006758 ORTHO05D008326 1.4e-42 176.0 91 85.7
BcaB07g31284 Brassica carinata HOM05D006758 ORTHO05D008326 1.8e-42 175.6 93 87.1
A09p16650 Brassica napus HOM05D006758 ORTHO05D008326 1.8e-42 175.6 93 87.1
BraA09t37304Z Brassica rapa HOM05D006758 ORTHO05D008326 1.8e-42 175.6 93 87.1
CARHR050560 Cardamine hirsuta HOM05D006758 ORTHO05D008326 1.8e-42 175.6 93 87.1
ECA234G0861 Erigeron canadensis HOM05D006758 ORTHO05D008326 1.8e-42 175.6 91 86.8
TWI38G0518 Tripterygium wilfordii HOM05D006758 ORTHO05D008326 1.8e-42 175.6 91 86.8
Actinidia11840 Actinidia chinensis HOM05D006758 ORTHO05D008326 2.4e-42 175.3 91 86.8
Lsat_1_v5_gn_4_59120 Lactuca sativa HOM05D006758 ORTHO05D008326 2.4e-42 175.3 89 88.8
Sp2g02770 Schrenkiella parvula HOM05D006758 ORTHO05D008326 2.4e-42 175.3 93 86.0
Aa31LG1G3210 Aethionema arabicum HOM05D006758 ORTHO05D008326 3.1e-42 174.9 93 86.0
ATR0661G232 Amborella trichopoda HOM05D006758 ORTHO05D008326 3.1e-42 174.9 91 83.5
HanXRQChr16g0515881 Helianthus annuus HOM05D006758 ORTHO05D008326 3.1e-42 174.9 91 86.8
DCAR_004197 Daucus carota HOM05D006758 ORTHO05D008326 5.2e-42 174.1 93 86.0
BcaB04g20373 Brassica carinata HOM05D006758 ORTHO05D008326 6.9e-42 173.7 93 84.9
RcHm_v2.0_Chr5g0003931 Rosa chinensis HOM05D006758 ORTHO05D008326 9.0e-42 173.3 94 85.1
AL2G14330 Arabidopsis lyrata HOM05D006758 ORTHO05D008326 1.5e-41 172.6 93 84.9
AT1G61780 Arabidopsis thaliana HOM05D006758 ORTHO05D008326 1.5e-41 172.6 93 84.9
AUR62022003 Chenopodium quinoa HOM05D006758 ORTHO05D008326 1.5e-41 172.6 91 85.7
Pp3c2_14210 Physcomitrium patens HOM05D006758 ORTHO05D008326 2.6e-41 171.8 91 84.6
Sabra11G0016800 Salix brachista HOM05D006758 ORTHO05D008326 2.6e-41 171.8 91 85.7
FvH4_3g02640 Fragaria vesca HOM05D006758 ORTHO05D008326 4.4e-41 171.0 94 84.0
unitig_61.g26114 Utricularia gibba HOM05D006758 ORTHO05D008326 7.6e-41 170.2 117 70.9
Mapoly0102s0010 Marchantia polymorpha HOM05D006758 ORTHO05D008326 1.7e-40 169.1 91 82.4
SMO351G0293 Selaginella moellendorffii HOM05D006758 ORTHO05D008326 5.4e-39 164.1 90 76.7
AagrBONN_evm.TU.Sc2ySwM_344.4905 Anthoceros agrestis HOM05D006758 ORTHO05D008326 1.6e-38 162.5 91 78.0
Sc17g0007080 Simmondsia chinensis HOM05D006758 ORTHO05D008326 1.3e-37 159.5 80 87.5
CBR_g45280 Chara braunii HOM05D006758 ORTHO05D008326 4.3e-36 154.5 88 77.3
CSS0030244 Camellia sinensis var. sinensis HOM05D006758 ORTHO05D008326 3.6e-35 151.4 75 88.0
Peaxi162Scf00082g10217 Petunia axillaris HOM05D006758 ORTHO05D008326 1.2e-33 146.4 93 77.4
Ah.09g235270 Amaranthus hybridus HOM05D006758 ORTHO05D008326 2.6e-33 145.2 75 85.3
MCO09G771 Micromonas commoda HOM05D006758 ORTHO05D008326 7.1e-23 110.5 89 56.2
Cre16.g670200 Chlamydomonas reinhardtii HOM05D006758 ORTHO05D008326 1.0e-21 106.7 89 55.1
Hund23506 Selenicereus undatus HOM05D006758 ORTHO05D008326 1.0e-21 106.7 56 83.9
A01p30660 Brassica napus HOM05D006758 ORTHO05D008326 2.2e-16 89.0 43 88.4
A01p30680 Brassica napus HOM05D006758 ORTHO05D008326 8.4e-16 87.0 43 86.0
BraA01t03197Z Brassica rapa HOM05D006758 ORTHO05D008326 8.4e-16 87.0 43 86.0
Atru.BG.309.p Acer truncatum HOM05D006758 ORTHO05D008326 3.5e-14 81.6 42 88.1
SalBow1G3298 Salvia bowleyana HOM05D006758 ORTHO05D008326 7.9e-14 80.5 39 92.3
MBI16_g27830_MAGBIO Magnolia biondii HOM05D004176 ORTHO05D008326 2.3e-13 79.0 50 72.0
Cre16.g689376 Chlamydomonas reinhardtii HOM05D006758 ORTHO05D008326 3.0e-13 78.6 71 50.7
Haze_06744 Corylus avellana HOM05D006758 ORTHO05D008326 1.5e-12 76.3 40 87.5
MBI15_g03894_MAGBIO Magnolia biondii HOM05D006758 ORTHO05D008326 1.5e-12 76.3 50 70.0
FAN25G0357 Fragaria x ananassa HOM05D006758 ORTHO05D008326 7.4e-12 73.9 39 87.2
MBI02_g21861_MAGBIO Magnolia biondii HOM05D006758 ORTHO05D008326 7.4e-12 73.9 38 89.5
HPP92_000849 Vanilla planifolia HOM05D006758 ORTHO05D008326 9.7e-12 73.6 37 91.9
QL05p074940 Quercus lobata HOM05D006758 ORTHO05D008326 2.2e-11 72.4 40 82.5
QL93p0073_0472 Quercus lobata HOM05D006758 ORTHO05D008326 2.2e-11 72.4 40 82.5
vmacro15829 Vaccinium macrocarpon HOM05D006758 ORTHO05D008326 2.2e-11 72.4 38 86.8
FAN21G3907 Fragaria x ananassa HOM05D006758 ORTHO05D008326 8.2e-11 70.5 42 81.0
Ah.14g088140 Amaranthus hybridus HOM05D000097 ORTHO05D000041 1.1e-10 70.1 39 82.1
Gohir.D06G213300 Gossypium hirsutum HOM05D006758 ORTHO05D008326 4.5e-09 64.7 34 82.4


User provided reference genes

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