Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu051213.1 Olea europaea HOM05D005226 ORTHO05D004666 2.2e-51 205.3 102 100.0
Oeu033894.1 Olea europaea HOM05D005226 ORTHO05D004666 2.1e-25 119.0 97 61.9
Cc09_g01800 Coffea canephora HOM05D005226 ORTHO05D004666 5.7e-23 110.9 97 60.8
COL.COLO4_31758 Corchorus olitorius HOM05D005226 ORTHO05D004666 2.4e-21 105.5 93 54.8
Migut.M01309 Erythranthe guttata HOM05D005226 ORTHO05D004666 7.0e-21 104.0 90 56.7
Nitab4.5_0000005g0440 Nicotiana tabacum HOM05D005226 ORTHO05D004666 7.0e-21 104.0 92 58.7
Nitab4.5_0003254g0050 Nicotiana tabacum HOM05D005226 ORTHO05D004666 1.2e-20 103.2 98 55.1
Medtr2g022960 Medicago truncatula HOM05D005226 ORTHO05D004666 4.5e-20 101.3 87 59.8
TAR627G0695 Trochodendron aralioides HOM05D005226 ORTHO05D004666 4.5e-20 101.3 96 58.3
MSTRG.13145 Avicennia marina HOM05D005226 ORTHO05D004666 5.9e-20 100.9 79 65.8
Dinv20040 Davidia involucrata HOM05D005226 ORTHO05D004666 1.0e-19 100.1 92 56.5
CAN.G569.14 Capsicum annuum HOM05D005226 ORTHO05D004666 1.7e-19 99.4 89 53.9
TPR.G7637 Trifolium pratense HOM05D005226 ORTHO05D004666 2.9e-19 98.6 86 58.1
Solyc02g080450.1 Solanum lycopersicum HOM05D005226 ORTHO05D004666 3.8e-19 98.2 87 55.2
Sopen02g025140 Solanum pennellii HOM05D005226 ORTHO05D004666 3.8e-19 98.2 87 55.2
Duzib192G0836 Durio zibethinus HOM05D005226 ORTHO05D004666 5.0e-19 97.8 95 50.5
Duzib235G0113 Durio zibethinus HOM05D005226 ORTHO05D004666 5.0e-19 97.8 95 50.5
Glyma.13G205400 Glycine max HOM05D005226 ORTHO05D004666 6.6e-19 97.4 89 53.9
CiPaw.10G070100 Carya illinoinensis HOM05D005226 ORTHO05D004666 8.6e-19 97.1 93 50.5
Duzib160G0401 Durio zibethinus HOM05D005226 ORTHO05D004666 1.1e-18 96.7 95 48.4
CiPaw.09G090600 Carya illinoinensis HOM05D005226 ORTHO05D004666 1.5e-18 96.3 88 52.3
Gorai.009G178000 Gossypium raimondii HOM05D005226 ORTHO05D004666 1.5e-18 96.3 95 48.4
Thecc.06G219100 Theobroma cacao HOM05D005226 ORTHO05D004666 1.5e-18 96.3 86 52.3
Aqoxy1G03603 Aquilegia oxysepala HOM05D005226 ORTHO05D004666 1.9e-18 95.9 88 56.8
Gohir.A05G169600 Gossypium hirsutum HOM05D005226 ORTHO05D004666 1.9e-18 95.9 95 48.4
Nitab4.5_0000389g0060 Nicotiana tabacum HOM05D005226 ORTHO05D004666 2.5e-18 95.5 92 54.3
Glyma.15G107000 Glycine max HOM05D005226 ORTHO05D004666 3.3e-18 95.1 87 52.9
TAR624G0719 Trochodendron aralioides HOM05D005226 ORTHO05D004666 4.3e-18 94.7 94 53.2
Nn1g03549 Nelumbo nucifera HOM05D005226 ORTHO05D004666 7.3e-18 94.0 90 52.2
SGA_v2.0_scaffold4G01918 Striga asiatica HOM05D005226 ORTHO05D004666 7.3e-18 94.0 97 52.6
SGA_v2.0_scaffold89G27461 Striga asiatica HOM05D005226 ORTHO05D004666 9.5e-18 93.6 93 51.6
Thecc.06G087600 Theobroma cacao HOM05D005226 ORTHO05D004666 9.5e-18 93.6 93 48.4
Gohir.D05G172800 Gossypium hirsutum HOM05D005226 ORTHO05D004666 1.2e-17 93.2 95 47.4
Gohir.A10G013400 Gossypium hirsutum HOM05D005226 ORTHO05D004666 2.1e-17 92.4 95 45.3
Gohir.D10G013300 Gossypium hirsutum HOM05D005226 ORTHO05D004666 2.8e-17 92.0 95 45.3
Gorai.011G015000 Gossypium raimondii HOM05D005226 ORTHO05D004666 2.8e-17 92.0 95 45.3
Prupe.4G022200 Prunus persica HOM05D005226 ORTHO05D004666 2.8e-17 92.0 87 54.0
Nn5g29365 Nelumbo nucifera HOM05D005226 ORTHO05D004666 3.6e-17 91.7 91 51.6
TWI38G0534 Tripterygium wilfordii HOM05D005226 ORTHO05D004666 4.7e-17 91.3 87 52.9
Nitab4.5_0006137g0040 Nicotiana tabacum HOM05D005226 ORTHO05D004666 6.1e-17 90.9 85 56.5
SalBow8G4932 Salvia bowleyana HOM05D005226 ORTHO05D004666 6.1e-17 90.9 84 58.3
PGSC0003DMG400016491 Solanum tuberosum HOM05D005226 ORTHO05D004666 8.0e-17 90.5 82 54.9
Lalb_Chr15g0087551 Lupinus albus HOM05D005226 ORTHO05D004666 1.8e-16 89.4 85 55.3
PGSC0003DMG400004522 Solanum tuberosum HOM05D005226 ORTHO05D004666 1.8e-16 89.4 93 49.5
MD05G1344200 Malus domestica HOM05D005226 ORTHO05D004666 3.0e-16 88.6 85 52.9
Manes.16G008100 Manihot esculenta HOM05D005226 ORTHO05D004666 3.0e-16 88.6 92 52.2
Ciclev10017536m.g Citrus clementina HOM05D005226 ORTHO05D004666 4.0e-16 88.2 91 47.3
Eucgr.E04072 Eucalyptus grandis HOM05D005226 ORTHO05D004666 5.2e-16 87.8 94 43.6
Phvul.006G150300 Phaseolus vulgaris HOM05D005226 ORTHO05D004666 5.2e-16 87.8 86 53.5
FAN25G2807 Fragaria x ananassa HOM05D005226 ORTHO05D004666 6.8e-16 87.4 84 57.1
Peaxi162Scf00262g00094 Petunia axillaris HOM05D005226 ORTHO05D004666 6.8e-16 87.4 82 57.3
VMungo0540G0286 Vigna mungo HOM05D005226 ORTHO05D004666 6.8e-16 87.4 84 52.4
Sed0011520 Sechium edule HOM05D005226 ORTHO05D004666 8.9e-16 87.0 95 46.3
Eucgr.E04071 Eucalyptus grandis HOM05D005226 ORTHO05D004666 1.2e-15 86.7 94 43.6
Hma1.2p1_1142F.1_g260990 Hydrangea macrophylla HOM05D005226 ORTHO05D004666 1.2e-15 86.7 94 48.9
ClCG03G004790 Citrullus lanatus HOM05D005226 ORTHO05D004666 1.5e-15 86.3 89 48.3
CANSAT56G2875 Cannabis sativa HOM05D005226 ORTHO05D004666 2.0e-15 85.9 87 52.9
Cfa021903 Carpinus fangiana HOM05D005226 ORTHO05D004666 2.0e-15 85.9 96 47.9
QL05p073519 Quercus lobata HOM05D005226 ORTHO05D004666 2.0e-15 85.9 88 45.5
QL05p073756 Quercus lobata HOM05D005226 ORTHO05D004666 2.0e-15 85.9 88 45.5
RcHm_v2.0_Chr5g0003391 Rosa chinensis HOM05D005226 ORTHO05D004666 4.4e-15 84.7 84 54.8
ClCG01G022050 Citrullus lanatus HOM05D005226 ORTHO05D004666 5.8e-15 84.3 87 47.1
Cfa000235 Carpinus fangiana HOM05D005226 ORTHO05D004666 7.5e-15 84.0 88 47.7
FvH4_3g02270 Fragaria vesca HOM05D005226 ORTHO05D004666 7.5e-15 84.0 84 53.6
Eucgr.E04074 Eucalyptus grandis HOM05D005226 ORTHO05D004666 9.8e-15 83.6 94 43.6
Lj6g0027274 Lotus japonicus HOM05D005226 ORTHO05D004666 1.7e-14 82.8 84 52.4
MD00G1206700 Malus domestica HOM05D005226 ORTHO05D004666 1.7e-14 82.8 79 54.4
MD10G1320200 Malus domestica HOM05D005226 ORTHO05D004666 1.7e-14 82.8 79 54.4
Aqoxy4G01362 Aquilegia oxysepala HOM05D005226 ORTHO05D004666 2.2e-14 82.4 70 61.4
MELO3C007384.2 Cucumis melo HOM05D005226 ORTHO05D004666 2.2e-14 82.4 87 47.1
ECA234G1355 Erigeron canadensis HOM05D005226 ORTHO05D004666 2.9e-14 82.0 92 52.2
Eucgr.D01311 Eucalyptus grandis HOM05D005226 ORTHO05D004666 2.9e-14 82.0 88 51.1
Rhsim02G0108700 Rhododendron simsii HOM05D005226 ORTHO05D004666 2.9e-14 82.0 81 49.4
Rhsim02G0109500 Rhododendron simsii HOM05D005226 ORTHO05D004666 2.9e-14 82.0 81 49.4
Sabra04G0009100 Salix brachista HOM05D005226 ORTHO05D004666 2.9e-14 82.0 87 48.3
PGR042G2779 Punica granatum HOM05D005226 ORTHO05D004666 3.7e-14 81.6 99 48.5
DCAR_004212 Daucus carota HOM05D005226 ORTHO05D004666 4.9e-14 81.3 89 47.2
Sed0027353 Sechium edule HOM05D005226 ORTHO05D004666 4.9e-14 81.3 86 50.0
Gorai.010G180000 Gossypium raimondii HOM05D005226 ORTHO05D004666 6.4e-14 80.9 95 46.3
Potri.004G016800 Populus trichocarpa HOM05D005226 ORTHO05D004666 6.4e-14 80.9 96 46.9
Sed0005209 Sechium edule HOM05D005226 ORTHO05D004666 8.3e-14 80.5 87 47.1
Eucgr.L02166 Eucalyptus grandis HOM05D005226 ORTHO05D004666 1.1e-13 80.1 88 50.0
CsaV3_6G049110 Cucumis sativus L. HOM05D005226 ORTHO05D004666 1.4e-13 79.7 84 47.6
Gohir.A06G148050 Gossypium hirsutum HOM05D005226 ORTHO05D004666 1.4e-13 79.7 95 46.3
HanXRQChr16g0515991 Helianthus annuus HOM05D005226 ORTHO05D004666 1.4e-13 79.7 78 55.1
MBI18_g02740_MAGBIO Magnolia biondii HOM05D005226 ORTHO05D004666 1.4e-13 79.7 94 43.6
Lalb_Chr18g0056301 Lupinus albus HOM05D005226 ORTHO05D004666 1.8e-13 79.3 86 47.7
DCAR_008143 Daucus carota HOM05D005226 ORTHO05D004666 3.2e-13 78.6 89 44.9
Haze_09878 Corylus avellana HOM05D005226 ORTHO05D004666 4.1e-13 78.2 95 44.2
Gohir.D06G153975 Gossypium hirsutum HOM05D005226 ORTHO05D004666 4.1e-13 78.2 95 45.3
MELO3C002462.2 Cucumis melo HOM05D005226 ORTHO05D004666 5.4e-13 77.8 86 45.3
Eucgr.D01314 Eucalyptus grandis HOM05D005226 ORTHO05D004666 7.0e-13 77.4 88 47.7
Rhsim02G0108200 Rhododendron simsii HOM05D005226 ORTHO05D004666 7.0e-13 77.4 72 52.8
Lsat_1_v5_gn_4_59601 Lactuca sativa HOM05D005226 ORTHO05D004666 9.2e-13 77.0 90 47.8
Peaxi162Scf00565g00036 Petunia axillaris HOM05D005226 ORTHO05D004666 1.2e-12 76.6 82 50.0
CsaV3_1G010830 Cucumis sativus L. HOM05D005226 ORTHO05D004666 2.7e-12 75.5 86 44.2
Potri.011G002100 Populus trichocarpa HOM05D005226 ORTHO05D004666 4.6e-12 74.7 87 46.0
A06p08210 Brassica napus HOM05D005226 ORTHO05D004666 6.0e-12 74.3 97 43.3
BraA06t24021Z Brassica rapa HOM05D005226 ORTHO05D004666 6.0e-12 74.3 97 43.3
Glyma.18G063800 Glycine max HOM05D005226 ORTHO05D004666 7.8e-12 73.9 63 54.0
Medtr3g463740 Medicago truncatula HOM05D005226 ORTHO05D004666 1.0e-11 73.6 59 57.6
PSO832G1518 Papaver somniferum HOM05D005226 ORTHO05D004666 1.0e-11 73.6 101 39.6
BolC5t29718H Brassica oleracea HOM05D005226 ORTHO05D004666 1.3e-11 73.2 97 43.3
Peaxi162Scf00565g00021 Petunia axillaris HOM05D005226 ORTHO05D004666 1.3e-11 73.2 77 49.4
Haze_06787 Corylus avellana HOM05D005226 ORTHO05D004666 1.7e-11 72.8 87 44.8
THA.LOC104818840 Tarenaya hassleriana HOM05D005226 ORTHO05D004666 1.7e-11 72.8 104 45.2
AL1G22790 Arabidopsis lyrata HOM05D005226 ORTHO05D004666 2.3e-11 72.4 96 45.8
BcaC05g25032 Brassica carinata HOM05D005226 ORTHO05D004666 2.3e-11 72.4 97 43.3
BcaNung04807 Brassica carinata HOM05D005226 ORTHO05D004666 3.0e-11 72.0 97 43.3
Atru.chr10.2207 Acer truncatum HOM05D005226 ORTHO05D004666 3.9e-11 71.6 98 44.9
Rhsim02G0109000 Rhododendron simsii HOM05D005226 ORTHO05D004666 3.9e-11 71.6 76 48.7
A08p33360 Brassica napus HOM05D005226 ORTHO05D004666 5.0e-11 71.2 97 45.4
CARHR011960 Cardamine hirsuta HOM05D005226 ORTHO05D004666 5.0e-11 71.2 95 45.3
Carub.0001s1129 Capsella rubella HOM05D005226 ORTHO05D004666 6.6e-11 70.9 94 46.8
C05p09770 Brassica napus HOM05D005226 ORTHO05D004666 8.6e-11 70.5 97 42.3
Aa31LG1G3110 Aethionema arabicum HOM05D005226 ORTHO05D004666 1.9e-10 69.3 94 42.6
BraA08t35253Z Brassica rapa HOM05D005226 ORTHO05D004666 1.9e-10 69.3 97 45.4
PGR004G1778 Punica granatum HOM05D005226 ORTHO05D004666 1.9e-10 69.3 96 41.7
unitig_749.g13630 Utricularia gibba HOM05D005226 ORTHO05D004666 1.9e-10 69.3 96 39.6
BcaC07g38677 Brassica carinata HOM05D005226 ORTHO05D004666 2.5e-10 68.9 98 43.9
BolC8t49112H Brassica oleracea HOM05D005226 ORTHO05D004666 2.5e-10 68.9 98 43.9
arahy.Tifrunner.gnm1.ann1.1P1WAU Arachis hypogaea HOM05D005226 ORTHO05D004666 4.3e-10 68.2 71 54.9
A09p64400 Brassica napus HOM05D005226 ORTHO05D004666 4.3e-10 68.2 99 40.4
BraA09t41784Z Brassica rapa HOM05D005226 ORTHO05D004666 4.3e-10 68.2 99 40.4
AT1G11655 Arabidopsis thaliana HOM05D005226 ORTHO05D004666 5.6e-10 67.8 96 44.8
arahy.Tifrunner.gnm1.ann1.0GES1T Arachis hypogaea HOM05D005226 ORTHO05D004666 5.6e-10 67.8 85 49.4
PSO210G5560 Papaver somniferum HOM05D005226 ORTHO05D004666 7.3e-10 67.4 101 37.6
TPR.G21187 Trifolium pratense HOM05D005226 ORTHO05D004666 7.3e-10 67.4 57 54.4
C08p14770 Brassica napus HOM05D005226 ORTHO05D004666 1.2e-09 66.6 98 42.9
unitig_26.g9388 Utricularia gibba HOM05D005226 ORTHO05D004666 1.2e-09 66.6 81 44.4
BcaC07g41768 Brassica carinata HOM05D005226 ORTHO05D004666 8.0e-09 63.9 99 38.4
C08p48100 Brassica napus HOM05D005226 ORTHO05D004666 8.0e-09 63.9 99 38.4
Thhalv10009573m.g Eutrema salsugineum HOM05D005226 ORTHO05D004666 8.0e-09 63.9 81 49.4
ATR0752G088 Amborella trichopoda HOM05D005226 ORTHO05D004666 1.1e-08 63.5 92 39.1
BcaB03g13244 Brassica carinata HOM05D005226 ORTHO05D004666 1.1e-08 63.5 73 49.3
CARHR228690 Cardamine hirsuta HOM05D009543 ORTHO05D004666 8.9e-08 60.5 78 38.5
arahy.Tifrunner.gnm1.ann1.89FC4C Arachis hypogaea HOM05D005226 ORTHO05D004666 3.4e-07 58.5 87 41.4
BcaB08g37410 Brassica carinata HOM05D005226 ORTHO05D004666 7.5e-07 57.4 91 37.4
EL10Ac8g20036 Beta vulgaris HOM05D005226 ORTHO05D004666 1.3e-06 56.6 56 44.6
BcaB01g02575 Brassica carinata HOM05D009543 ORTHO05D004666 1.7e-06 56.2 70 37.1
AL7G31950 Arabidopsis lyrata HOM05D009543 ORTHO05D004666 2.9e-06 55.5 76 36.8
AT4G21902 Arabidopsis thaliana HOM05D009543 ORTHO05D004666 4.9e-06 54.7 76 36.8
THA.LOC104806304 Tarenaya hassleriana HOM05D005226 ORTHO05D004666 4.9e-06 54.7 87 35.6
AT4G04745 Arabidopsis thaliana HOM05D009543 ORTHO05D004666 8.3e-06 53.9 70 37.1


User provided reference genes

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