Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu051168.1 Olea europaea HOM05D003616 ORTHO05D004289 3.3e-46 188.0 92 100.0
Oeu007366.1 Olea europaea HOM05D003616 ORTHO05D004289 1.0e-42 176.4 92 91.3
MSTRG.24236 Avicennia marina HOM05D003616 ORTHO05D004289 1.3e-42 176.0 92 90.2
SGA_v2.0_scaffold19G08556 Striga asiatica HOM05D003616 ORTHO05D004289 1.7e-42 175.6 92 91.3
Cc02_g37150 Coffea canephora HOM05D003616 ORTHO05D004289 2.2e-42 175.3 92 91.3
Solyc04g081740.3 Solanum lycopersicum HOM05D003616 ORTHO05D004289 2.2e-42 175.3 92 91.3
SGA_v2.0_scaffold92G28201 Striga asiatica HOM05D003616 ORTHO05D004289 2.2e-42 175.3 92 91.3
MELO3C017361.2 Cucumis melo HOM05D003616 ORTHO05D004289 5.0e-42 174.1 92 90.2
CsaV3_1G004390 Cucumis sativus L. HOM05D003616 ORTHO05D004289 5.0e-42 174.1 92 90.2
Nitab4.5_0006505g0020 Nicotiana tabacum HOM05D003616 ORTHO05D004289 5.0e-42 174.1 92 90.2
Manes.14G171500 Manihot esculenta HOM05D003616 ORTHO05D004289 6.5e-42 173.7 92 90.2
Oeu026133.1 Olea europaea HOM05D003616 ORTHO05D004289 6.5e-42 173.7 92 90.2
QL10p029638 Quercus lobata HOM05D003616 ORTHO05D004289 1.1e-41 172.9 91 89.0
CSS0013276 Camellia sinensis var. sinensis HOM05D003616 ORTHO05D004289 1.4e-41 172.6 92 89.1
HanXRQChr07g0204451 Helianthus annuus HOM05D003616 ORTHO05D004289 1.4e-41 172.6 92 88.0
Sopen04g035370 Solanum pennellii HOM05D003616 ORTHO05D004289 1.4e-41 172.6 92 90.2
Actinidia28138 Actinidia chinensis HOM05D003616 ORTHO05D004289 1.9e-41 172.2 92 89.1
Ciclev10008944m.g Citrus clementina HOM05D003616 ORTHO05D004289 2.5e-41 171.8 91 89.0
Potri.012G046600 Populus trichocarpa HOM05D003616 ORTHO05D004289 2.5e-41 171.8 92 89.1
ClCG06G014280 Citrullus lanatus HOM05D003616 ORTHO05D004289 3.2e-41 171.4 92 88.0
Duzib093G0398 Durio zibethinus HOM05D003616 ORTHO05D004289 4.2e-41 171.0 90 88.9
HanXRQChr14g0455291 Helianthus annuus HOM05D003616 ORTHO05D004289 4.2e-41 171.0 92 89.1
Sabra12G0032700 Salix brachista HOM05D003616 ORTHO05D004289 4.2e-41 171.0 92 88.0
CAN.G311.50 Capsicum annuum HOM05D003616 ORTHO05D004289 5.5e-41 170.6 92 91.3
Haze_18855 Corylus avellana HOM05D003616 ORTHO05D004289 5.5e-41 170.6 92 88.0
Dinv39539 Davidia involucrata HOM05D003616 ORTHO05D004289 5.5e-41 170.6 92 89.1
Migut.C00863 Erythranthe guttata HOM05D003616 ORTHO05D004289 5.5e-41 170.6 92 89.1
Sed0005025 Sechium edule HOM05D003616 ORTHO05D004289 7.2e-41 170.2 92 87.0
Aqoxy2G03601 Aquilegia oxysepala HOM05D003616 ORTHO05D004289 9.4e-41 169.9 92 88.0
Lj5A158G70 Lonicera japonica HOM05D003616 ORTHO05D004289 9.4e-41 169.9 92 87.0
Nn3g18380 Nelumbo nucifera HOM05D003616 ORTHO05D004289 9.4e-41 169.9 91 89.0
Cpa.g.sc3.395 Carica papaya HOM05D003616 ORTHO05D004289 1.2e-40 169.5 90 88.9
Hund05170 Selenicereus undatus HOM05D003616 ORTHO05D004289 1.2e-40 169.5 92 85.9
arahy.Tifrunner.gnm1.ann1.0SP0C0 Arachis hypogaea HOM05D003616 ORTHO05D004289 1.6e-40 169.1 92 85.9
arahy.Tifrunner.gnm1.ann1.YQ88M5 Arachis hypogaea HOM05D003616 ORTHO05D004289 1.6e-40 169.1 92 85.9
Cfa019655 Carpinus fangiana HOM05D003616 ORTHO05D004289 1.6e-40 169.1 92 87.0
Migut.N03175 Erythranthe guttata HOM05D003616 ORTHO05D004289 1.6e-40 169.1 89 87.6
Glyma.07G102200 Glycine max HOM05D003616 ORTHO05D004289 1.6e-40 169.1 92 87.0
Glyma.09G177000 Glycine max HOM05D003616 ORTHO05D004289 1.6e-40 169.1 92 87.0
Lj2g0015525 Lotus japonicus HOM05D003616 ORTHO05D004289 1.6e-40 169.1 92 87.0
TAR625G0790 Trochodendron aralioides HOM05D003616 ORTHO05D004289 1.6e-40 169.1 92 87.0
Duzib084G0113 Durio zibethinus HOM05D003616 ORTHO05D004289 2.1e-40 168.7 92 87.0
Lalb_Chr14g0370571 Lupinus albus HOM05D003616 ORTHO05D004289 2.1e-40 168.7 92 85.9
Thecc.03G055800 Theobroma cacao HOM05D003616 ORTHO05D004289 2.1e-40 168.7 92 87.0
Lsat_1_v5_gn_2_108180 Lactuca sativa HOM05D003616 ORTHO05D004289 2.7e-40 168.3 92 88.0
Medtr6g069420 Medicago truncatula HOM05D003616 ORTHO05D004289 2.7e-40 168.3 92 85.9
Potri.015G038300 Populus trichocarpa HOM05D003616 ORTHO05D004289 2.7e-40 168.3 92 87.0
CANSAT80G0515 Cannabis sativa HOM05D003616 ORTHO05D004289 3.6e-40 167.9 90 85.6
Psat1g033600 Pisum sativum HOM05D003616 ORTHO05D004289 3.6e-40 167.9 92 85.9
Sed0021008 Sechium edule HOM05D003616 ORTHO05D004289 3.6e-40 167.9 92 87.0
Prupe.5G233700 Prunus persica HOM05D003616 ORTHO05D004289 4.7e-40 167.5 92 84.8
TAR629G1297 Trochodendron aralioides HOM05D003616 ORTHO05D004289 4.7e-40 167.5 90 86.7
Gohir.D02G121200 Gossypium hirsutum HOM05D003616 ORTHO05D004289 6.1e-40 167.2 92 85.9
Gorai.005G133000 Gossypium raimondii HOM05D003616 ORTHO05D004289 6.1e-40 167.2 92 85.9
Lalb_Chr22g0353551 Lupinus albus HOM05D003616 ORTHO05D004289 6.1e-40 167.2 90 86.7
GSVIVG01008442001 Vitis vinifera HOM05D003616 ORTHO05D004289 6.1e-40 167.2 92 85.9
CiPaw.15G143500 Carya illinoinensis HOM05D003616 ORTHO05D004289 7.9e-40 166.8 92 87.0
PSO541G0876 Papaver somniferum HOM05D003616 ORTHO05D004289 7.9e-40 166.8 92 85.9
Phvul.004G150900 Phaseolus vulgaris HOM05D003616 ORTHO05D004289 7.9e-40 166.8 92 84.8
Thecc.08G048000 Theobroma cacao HOM05D003616 ORTHO05D004289 7.9e-40 166.8 90 86.7
TPR.G8619 Trifolium pratense HOM05D003616 ORTHO05D004289 7.9e-40 166.8 92 85.9
Atru.chr9.1732 Acer truncatum HOM05D003616 ORTHO05D004289 1.0e-39 166.4 92 84.8
Ca_25333_v3 Cicer arietinum L. HOM05D003616 ORTHO05D004289 1.0e-39 166.4 92 84.8
MD14G1236600 Malus domestica HOM05D003616 ORTHO05D004289 1.0e-39 166.4 90 85.6
Sc02g0008690 Simmondsia chinensis HOM05D003616 ORTHO05D004289 1.0e-39 166.4 92 84.8
SGA_v2.0_scaffold25G11209 Striga asiatica HOM05D003616 ORTHO05D004289 1.0e-39 166.4 90 86.7
Cc10_g01410 Coffea canephora HOM05D003616 ORTHO05D004289 1.4e-39 166.0 90 84.4
Eucgr.B01000 Eucalyptus grandis HOM05D003616 ORTHO05D004289 1.4e-39 166.0 92 83.7
Lj4A21T62 Lonicera japonica HOM05D003616 ORTHO05D004289 1.4e-39 166.0 90 86.7
Nn4g24400 Nelumbo nucifera HOM05D003616 ORTHO05D004289 1.4e-39 166.0 92 85.9
Lsat_1_v5_gn_8_25101 Lactuca sativa HOM05D003616 ORTHO05D004289 1.8e-39 165.6 92 84.8
PSO675G9362 Papaver somniferum HOM05D003616 ORTHO05D004289 1.8e-39 165.6 92 85.9
RcHm_v2.0_Chr7g0178351 Rosa chinensis HOM05D003616 ORTHO05D004289 1.8e-39 165.6 90 85.6
COL.COLO4_26116 Corchorus olitorius HOM05D003616 ORTHO05D004289 2.3e-39 165.2 90 85.6
Dinv17550 Davidia involucrata HOM05D003616 ORTHO05D004289 2.3e-39 165.2 92 87.0
Gohir.A03G092600 Gossypium hirsutum HOM05D003616 ORTHO05D004289 2.3e-39 165.2 92 84.8
Actinidia15440 Actinidia chinensis HOM05D003616 ORTHO05D004289 3.0e-39 164.9 92 85.9
Prupe.1G362400 Prunus persica HOM05D003616 ORTHO05D004289 3.0e-39 164.9 92 84.8
Cfa013983 Carpinus fangiana HOM05D003616 ORTHO05D004289 3.9e-39 164.5 91 85.7
FAN08G3458 Fragaria x ananassa HOM05D003616 ORTHO05D004289 3.9e-39 164.5 90 84.4
Rhsim06G0018600 Rhododendron simsii HOM05D003616 ORTHO05D004289 3.9e-39 164.5 89 86.5
THA.LOC104798670 Tarenaya hassleriana HOM05D003616 ORTHO05D004289 3.9e-39 164.5 90 85.6
FAN04G2471 Fragaria x ananassa HOM05D003616 ORTHO05D004289 5.2e-39 164.1 90 84.4
PGR083G0078 Punica granatum HOM05D003616 ORTHO05D004289 5.2e-39 164.1 92 83.7
TWI15G0798 Tripterygium wilfordii HOM05D003616 ORTHO05D004289 5.2e-39 164.1 92 84.8
CSS0016648 Camellia sinensis var. sinensis HOM05D003616 ORTHO05D004289 6.7e-39 163.7 92 84.8
FvH4_5g17390 Fragaria vesca HOM05D003616 ORTHO05D004289 6.7e-39 163.7 90 84.4
FAN18G4023 Fragaria x ananassa HOM05D003616 ORTHO05D004289 6.7e-39 163.7 90 84.4
TWI60G1662 Tripterygium wilfordii HOM05D003616 ORTHO05D004289 6.7e-39 163.7 92 83.7
unitig_748.g7720 Utricularia gibba HOM05D003616 ORTHO05D004289 6.7e-39 163.7 91 85.7
CiPaw.07G146600 Carya illinoinensis HOM05D003616 ORTHO05D004289 8.8e-39 163.3 90 85.6
vmacro07569 Vaccinium macrocarpon HOM05D003616 ORTHO05D004289 8.8e-39 163.3 89 86.5
VMungo0464G1067 Vigna mungo HOM05D003616 ORTHO05D004289 8.8e-39 163.3 90 84.4
MBI04_g06229_MAGBIO Magnolia biondii HOM05D003616 ORTHO05D004289 1.1e-38 162.9 92 83.7
Peaxi162Scf00860g00047 Petunia axillaris HOM05D003616 ORTHO05D004289 1.1e-38 162.9 92 83.7
Potri.005G242500 Populus trichocarpa HOM05D003616 ORTHO05D004289 2.0e-38 162.2 92 83.7
Atru.chr13.252 Acer truncatum HOM05D003616 ORTHO05D004289 2.6e-38 161.8 90 82.2
Manes.18G011100 Manihot esculenta HOM05D003616 ORTHO05D004289 3.3e-38 161.4 92 81.5
QL02p012220 Quercus lobata HOM05D003616 ORTHO05D004289 4.4e-38 161.0 91 83.5
Hma1.2p1_0023F.1_g015660 Hydrangea macrophylla HOM05D003616 ORTHO05D004289 5.7e-38 160.6 92 81.5
Sabra05G0187700 Salix brachista HOM05D003616 ORTHO05D004289 7.4e-38 160.2 92 80.4
AUR62040567 Chenopodium quinoa HOM05D003616 ORTHO05D004289 1.3e-37 159.5 89 83.1
PSO700G0251 Papaver somniferum HOM05D003616 ORTHO05D004289 1.3e-37 159.5 91 81.3
Ciclev10001861m.g Citrus clementina HOM05D003616 ORTHO05D004289 1.7e-37 159.1 90 84.4
Haze_22668 Corylus avellana HOM05D003616 ORTHO05D004289 1.7e-37 159.1 91 84.6
Thhalv10027850m.g Eutrema salsugineum HOM05D003616 ORTHO05D004289 1.7e-37 159.1 90 82.2
BcaB04g19405 Brassica carinata HOM05D003616 ORTHO05D004289 2.2e-37 158.7 90 82.2
GSVIVG01009954001 Vitis vinifera HOM05D003616 ORTHO05D004289 2.2e-37 158.7 92 82.6
Carub.0008s0714 Capsella rubella HOM05D003616 ORTHO05D004289 2.8e-37 158.3 90 81.1
MELO3C011352.2 Cucumis melo HOM05D003616 ORTHO05D004289 2.8e-37 158.3 92 81.5
Aa31LG9G12310 Aethionema arabicum HOM05D003616 ORTHO05D004289 4.8e-37 157.5 89 80.9
CDE05G1955 Ceratophyllum demersum HOM05D003616 ORTHO05D004289 4.8e-37 157.5 92 81.5
Gohir.A05G184900 Gossypium hirsutum HOM05D003616 ORTHO05D004289 4.8e-37 157.5 91 83.5
Gohir.D05G187700 Gossypium hirsutum HOM05D003616 ORTHO05D004289 4.8e-37 157.5 91 83.5
PSO170G1220 Papaver somniferum HOM05D003616 ORTHO05D004289 4.8e-37 157.5 91 81.3
AUR62013931 Chenopodium quinoa HOM05D003616 ORTHO05D004289 6.3e-37 157.1 89 82.0
DCAR_003546 Daucus carota HOM05D003616 ORTHO05D004289 6.3e-37 157.1 92 81.5
FvH4_2g38150 Fragaria vesca HOM05D003616 ORTHO05D004289 6.3e-37 157.1 92 81.5
Gorai.009G193000 Gossypium raimondii HOM05D003616 ORTHO05D004289 6.3e-37 157.1 91 83.5
AL8G19670 Arabidopsis lyrata HOM05D003616 ORTHO05D004289 8.2e-37 156.8 90 80.0
CsaV3_2G024290 Cucumis sativus L. HOM05D003616 ORTHO05D004289 8.2e-37 156.8 92 80.4
MD08G1010100 Malus domestica HOM05D003616 ORTHO05D004289 8.2e-37 156.8 92 79.3
Sp7g08670 Schrenkiella parvula HOM05D003616 ORTHO05D004289 8.2e-37 156.8 90 81.1
AT5G42150 Arabidopsis thaliana HOM05D003616 ORTHO05D004289 1.1e-36 156.4 90 80.0
FAN27G0470 Fragaria x ananassa HOM05D003616 ORTHO05D004289 1.8e-36 155.6 92 80.4
EL10Ac1g02157 Beta vulgaris HOM05D003616 ORTHO05D004289 2.4e-36 155.2 89 78.7
Os04g0244400 Oryza sativa ssp. japonica HOM05D003616 ORTHO05D004289 2.4e-36 155.2 90 78.9
RcHm_v2.0_Chr6g0303331 Rosa chinensis HOM05D003616 ORTHO05D004289 2.4e-36 155.2 92 79.3
BcaC03g16480 Brassica carinata HOM05D003616 ORTHO05D004289 3.1e-36 154.8 90 78.9
A02p27080 Brassica napus HOM05D003616 ORTHO05D004289 3.1e-36 154.8 90 78.9
C02p42910 Brassica napus HOM05D003616 ORTHO05D004289 3.1e-36 154.8 90 78.9
BolC2t10330H Brassica oleracea HOM05D003616 ORTHO05D004289 3.1e-36 154.8 90 78.9
BraA02t07726Z Brassica rapa HOM05D003616 ORTHO05D004289 3.1e-36 154.8 90 78.9
SalBow8G4338 Salvia bowleyana HOM05D003616 ORTHO05D004289 4.1e-36 154.5 87 79.3
ClCG08G014130 Citrullus lanatus HOM05D003616 ORTHO05D004289 5.3e-36 154.1 91 78.0
Eucgr.H00953 Eucalyptus grandis HOM05D003616 ORTHO05D004289 5.3e-36 154.1 88 81.8
Eucgr.H00955 Eucalyptus grandis HOM05D003616 ORTHO05D004289 5.3e-36 154.1 88 81.8
Lj1g0017366 Lotus japonicus HOM05D003616 ORTHO05D004289 5.3e-36 154.1 89 80.9
HPP92_015015 Vanilla planifolia HOM05D003616 ORTHO05D004289 7.0e-36 153.7 89 80.9
CARHR284720 Cardamine hirsuta HOM05D003616 ORTHO05D004289 9.1e-36 153.3 90 78.9
FAN15G3669 Fragaria x ananassa HOM05D003616 ORTHO05D004289 9.1e-36 153.3 92 79.3
ATR0180G023 Amborella trichopoda HOM05D003616 ORTHO05D004289 2.6e-35 151.8 92 77.2
TPR.G243 Trifolium pratense HOM05D003616 ORTHO05D004289 2.6e-35 151.8 89 80.9
Glyma.04G023200 Glycine max HOM05D003616 ORTHO05D004289 3.5e-35 151.4 89 79.8
Medtr3g114070 Medicago truncatula HOM05D003616 ORTHO05D004289 3.5e-35 151.4 92 78.3
arahy.Tifrunner.gnm1.ann1.MX1HG7 Arachis hypogaea HOM05D003616 ORTHO05D004289 5.9e-35 150.6 91 78.0
arahy.Tifrunner.gnm1.ann1.TXJ4LD Arachis hypogaea HOM05D003616 ORTHO05D004289 5.9e-35 150.6 91 78.0
CANSAT25G0701 Cannabis sativa HOM05D003616 ORTHO05D004289 5.9e-35 150.6 92 78.3
Lalb_Chr08g0246201 Lupinus albus HOM05D003616 ORTHO05D004289 7.7e-35 150.2 91 79.1
Phvul.009G009900 Phaseolus vulgaris HOM05D003616 ORTHO05D004289 1.0e-34 149.8 89 80.9
Sed0022788 Sechium edule HOM05D003616 ORTHO05D004289 1.3e-34 149.4 89 77.5
TWI12G0315 Tripterygium wilfordii HOM05D003616 ORTHO05D004289 1.3e-34 149.4 90 74.4
Ca_15480_v3 Cicer arietinum L. HOM05D003616 ORTHO05D004289 2.2e-34 148.7 89 79.8
VMungo1309G2159 Vigna mungo HOM05D003616 ORTHO05D004289 6.5e-34 147.1 89 78.7
Mapoly0126s0030 Marchantia polymorpha HOM05D003616 ORTHO05D004289 9.4e-33 143.3 89 75.3
Psat5g012880 Pisum sativum HOM05D003616 ORTHO05D004289 9.4e-33 143.3 87 79.3
SEGI_35058 Sequoiadendron giganteum HOM05D003616 ORTHO05D004289 1.2e-32 142.9 90 72.2
PGR031G0359 Punica granatum HOM05D003616 ORTHO05D004289 1.6e-32 142.5 91 74.7
Zm00001eb086680 Zea mays HOM05D003616 ORTHO05D004289 1.6e-32 142.5 121 60.3
HanXRQChr06g0183781 Helianthus annuus HOM05D003616 ORTHO05D004289 8.0e-32 140.2 81 79.0
Lsat_1_v5_gn_2_9140 Lactuca sativa HOM05D003616 ORTHO05D004289 8.0e-32 140.2 81 77.8
ATR0626G339 Amborella trichopoda HOM05D003616 ORTHO05D004289 4.0e-31 137.9 90 70.0
Sabra15G0037200 Salix brachista HOM05D003616 ORTHO05D004289 2.0e-30 135.6 166 48.2
Ah.11g040000 Amaranthus hybridus HOM05D003616 ORTHO05D004289 3.3e-30 134.8 74 86.5
SMO140G0111 Selaginella moellendorffii HOM05D003616 ORTHO05D004289 3.3e-30 134.8 92 69.6
ECA238G4543 Erigeron canadensis HOM05D003616 ORTHO05D004289 4.4e-30 134.4 81 77.8
CBR_g28548 Chara braunii HOM05D003616 ORTHO05D004289 7.5e-30 133.7 89 68.5
Pp3c22_13980 Physcomitrium patens HOM05D003616 ORTHO05D004289 1.7e-29 132.5 89 65.2
Pp3c19_15500 Physcomitrium patens HOM05D003616 ORTHO05D004289 3.1e-28 128.3 90 62.2
ECA233G1223 Erigeron canadensis HOM05D004899 ORTHO05D006580 3.2e-25 118.2 62 90.3
VMungo1309G0063 Vigna mungo HOM05D003616 ORTHO05D004289 8.8e-23 110.2 81 66.7
VMungo1309G1258 Vigna mungo HOM05D003616 ORTHO05D004289 9.8e-22 106.7 81 61.7
MD15G1010000 Malus domestica HOM05D003616 ORTHO05D004289 5.9e-19 97.4 91 58.2
vmacro17781 Vaccinium macrocarpon HOM05D003616 ORTHO05D004289 7.7e-19 97.1 55 83.6
Cre07.g319100 Chlamydomonas reinhardtii HOM05D003616 ORTHO05D004289 3.4e-14 81.6 93 46.2
Prupe.1G007300 Prunus persica HOM05D003616 ORTHO05D335316 1.7e-13 79.3 62 64.5
MCO10G259 Micromonas commoda HOM05D003616 ORTHO05D004289 3.1e-12 75.1 91 41.8
PRCOL_00004876 Prasinoderma coloniale HOM05D003616 ORTHO05D004289 3.1e-12 75.1 86 46.5
Lj9A420T36 Lonicera japonica HOM05D003616 ORTHO05D004289 7.0e-12 73.9 39 89.7
Lsat_1_v5_gn_6_77041 Lactuca sativa HOM05D003616 ORTHO05D232058 3.5e-11 71.6 53 58.5


User provided reference genes

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