Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu051126.2 Olea europaea HOM05D001925 ORTHO05D004257 6.2e-70 267.3 132 100.0
Lj9A584T67 Lonicera japonica HOM05D001925 ORTHO05D004257 6.3e-22 107.8 158 42.4
MSTRG.14225 Avicennia marina HOM05D001925 ORTHO05D004257 7.7e-20 100.9 149 40.9
Migut.M00740 Erythranthe guttata HOM05D001925 ORTHO05D004257 7.7e-20 100.9 140 41.4
Oeu031215.1 Olea europaea HOM05D001925 ORTHO05D004257 1.4e-18 96.7 139 42.4
Oeu005388.3 Olea europaea HOM05D001925 ORTHO05D004257 3.2e-18 95.5 139 42.4
SalBow8G4919 Salvia bowleyana HOM05D001925 ORTHO05D004257 3.2e-18 95.5 139 40.3
CSS0032978 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D004257 9.4e-18 94.0 140 42.9
Peaxi162Scf00020g00730 Petunia axillaris HOM05D001925 ORTHO05D004257 8.0e-17 90.9 137 40.9
PGSC0003DMG400000175 Solanum tuberosum HOM05D001925 ORTHO05D004257 6.7e-16 87.8 141 38.3
vmacro20933 Vaccinium macrocarpon HOM05D001925 ORTHO05D004257 1.5e-15 86.7 136 42.6
Lalb_Chr23g0275821 Lupinus albus HOM05D001925 ORTHO05D004257 1.7e-14 83.2 151 37.7
RcHm_v2.0_Chr1g0355951 Rosa chinensis HOM05D001925 ORTHO05D004257 4.8e-14 81.6 139 36.7
Rhsim07G0013800 Rhododendron simsii HOM05D001925 ORTHO05D004257 8.2e-14 80.9 141 39.7
Phvul.008G061700 Phaseolus vulgaris HOM05D001925 ORTHO05D004257 1.1e-13 80.5 147 36.7
Dinv32493 Davidia involucrata HOM05D001925 ORTHO05D004257 2.4e-13 79.3 139 40.3
Dinv43827 Davidia involucrata HOM05D001925 ORTHO05D005701 3.1e-13 79.0 107 44.9
Thecc.01G357700 Theobroma cacao HOM05D001925 ORTHO05D004257 3.1e-13 79.0 149 37.6
VMungo1383G2450 Vigna mungo HOM05D001925 ORTHO05D004257 3.1e-13 79.0 140 37.9
Actinidia02837 Actinidia chinensis HOM05D001925 ORTHO05D004257 4.1e-13 78.6 152 36.8
Actinidia20895 Actinidia chinensis HOM05D001925 ORTHO05D005701 9.1e-13 77.4 137 38.0
Glyma.18G234100 Glycine max HOM05D001925 ORTHO05D004257 1.2e-12 77.0 147 37.4
FAN01G0375 Fragaria x ananassa HOM05D001925 ORTHO05D005701 1.6e-12 76.6 139 37.4
Ca_07929_v3 Cicer arietinum L. HOM05D001925 ORTHO05D004257 2.0e-12 76.3 147 38.1
Glyma.09G258600 Glycine max HOM05D001925 ORTHO05D004257 2.0e-12 76.3 147 37.4
Atru.chr5.510 Acer truncatum HOM05D001925 ORTHO05D004257 3.5e-12 75.5 140 38.6
FAN10G1179 Fragaria x ananassa HOM05D001925 ORTHO05D004257 3.5e-12 75.5 139 36.7
FAN10G2559 Fragaria x ananassa HOM05D001925 ORTHO05D004257 3.5e-12 75.5 139 36.7
CAN.G78.91 Capsicum annuum HOM05D001925 ORTHO05D004257 4.5e-12 75.1 141 34.8
FvH4_7g14520 Fragaria vesca HOM05D001925 ORTHO05D004257 4.5e-12 75.1 139 36.7
Actinidia10041 Actinidia chinensis HOM05D001925 ORTHO05D004257 5.9e-12 74.7 140 37.1
TPR.G37799 Trifolium pratense HOM05D001925 ORTHO05D004257 5.9e-12 74.7 147 37.4
Cfa003907 Carpinus fangiana HOM05D001925 ORTHO05D005701 7.7e-12 74.3 166 34.9
Medtr7g077860 Medicago truncatula HOM05D001925 ORTHO05D004257 7.7e-12 74.3 147 37.4
FAN06G4809 Fragaria x ananassa HOM05D001925 ORTHO05D004257 1.0e-11 73.9 139 36.0
Manes.01G255700 Manihot esculenta HOM05D001925 ORTHO05D004257 1.7e-11 73.2 135 35.6
Psat3g108000 Pisum sativum HOM05D001925 ORTHO05D004257 2.2e-11 72.8 147 36.7
CANSAT21G1319 Cannabis sativa HOM05D001925 ORTHO05D004257 2.9e-11 72.4 133 36.8
FAN03G0610 Fragaria x ananassa HOM05D001925 ORTHO05D004257 2.9e-11 72.4 139 36.0
FAN06G3089 Fragaria x ananassa HOM05D001925 ORTHO05D004257 2.9e-11 72.4 139 36.0
Lj1g0025308 Lotus japonicus HOM05D001925 ORTHO05D004257 2.9e-11 72.4 171 32.7
TWI59G0730 Tripterygium wilfordii HOM05D001925 ORTHO05D004257 1.1e-10 70.5 140 37.9
TAR636G0324 Trochodendron aralioides HOM05D001925 ORTHO05D004257 1.1e-10 70.5 132 36.4
COL.COLO4_12725 Corchorus olitorius HOM05D001925 ORTHO05D005701 1.9e-10 69.7 149 34.9
DCAR_007445 Daucus carota HOM05D001925 ORTHO05D004257 1.9e-10 69.7 142 37.3
Duzib133G0433 Durio zibethinus HOM05D001925 ORTHO05D004257 1.9e-10 69.7 132 37.9
Prupe.2G172100 Prunus persica HOM05D001925 ORTHO05D004257 1.9e-10 69.7 140 36.4
TAR629G3070 Trochodendron aralioides HOM05D001925 ORTHO05D004257 2.5e-10 69.3 141 34.8
CiPaw.02G032000 Carya illinoinensis HOM05D001925 ORTHO05D004257 4.2e-10 68.6 141 35.5
QL04p053608 Quercus lobata HOM05D001925 ORTHO05D004257 4.2e-10 68.6 141 38.3
Haze_15511 Corylus avellana HOM05D001925 ORTHO05D005701 5.5e-10 68.2 166 34.9
Nn1g01562 Nelumbo nucifera HOM05D001925 ORTHO05D004257 5.5e-10 68.2 139 36.0
Nitab4.5_0006018g0030 Nicotiana tabacum HOM05D001925 ORTHO05D004257 5.5e-10 68.2 105 39.0
SalBow3G4075 Salvia bowleyana HOM05D001925 ORTHO05D004257 5.5e-10 68.2 134 33.6
DCAR_025195 Daucus carota HOM05D001925 ORTHO05D004257 7.2e-10 67.8 138 37.0
Duzib138G1880 Durio zibethinus HOM05D001925 ORTHO05D004257 7.2e-10 67.8 132 36.4
Manes.05G033200 Manihot esculenta HOM05D001925 ORTHO05D004257 7.2e-10 67.8 143 33.6
TAR374G1741 Trochodendron aralioides HOM05D001925 ORTHO05D004257 7.2e-10 67.8 145 36.6
Nn6g33385 Nelumbo nucifera HOM05D001925 ORTHO05D004257 9.4e-10 67.4 143 37.1
Nitab4.5_0000583g0190 Nicotiana tabacum HOM05D001925 ORTHO05D004257 1.6e-09 66.6 104 38.5
PGR031G2850 Punica granatum HOM05D001925 ORTHO05D004257 2.1e-09 66.2 135 37.0
Sopen01g038550 Solanum pennellii HOM05D001925 ORTHO05D004257 3.6e-09 65.5 98 39.8
Oeu061351.3 Olea europaea HOM05D001925 ORTHO05D004257 4.7e-09 65.1 118 39.8
PGR042G2528 Punica granatum HOM05D001925 ORTHO05D004257 6.1e-09 64.7 147 34.7
arahy.Tifrunner.gnm1.ann1.E5DFEG Arachis hypogaea HOM05D001925 ORTHO05D004257 1.8e-08 63.2 147 34.7
TWI23G0808 Tripterygium wilfordii HOM05D001925 ORTHO05D004257 1.8e-08 63.2 141 34.0
ClCG05G001470 Citrullus lanatus HOM05D001925 ORTHO05D004257 2.3e-08 62.8 138 34.1
arahy.Tifrunner.gnm1.ann1.IGP217 Arachis hypogaea HOM05D001925 ORTHO05D004257 3.0e-08 62.4 147 34.7
TAR375G1105 Trochodendron aralioides HOM05D001925 ORTHO05D004257 5.2e-08 61.6 145 35.2
Sopen10g006250 Solanum pennellii HOM05D001925 ORTHO05D004257 6.7e-08 61.2 154 31.8
Gorai.007G100500 Gossypium raimondii HOM05D001925 ORTHO05D004257 1.5e-07 60.1 154 34.4
Ciclev10021244m.g Citrus clementina HOM05D001925 ORTHO05D004257 2.0e-07 59.7 140 36.4
CsaV3_3G008850 Cucumis sativus L. HOM05D001925 ORTHO05D004257 2.0e-07 59.7 138 34.1
Sabra14G0062300 Salix brachista HOM05D001925 ORTHO05D004257 2.6e-07 59.3 132 35.6
MELO3C006104.2 Cucumis melo HOM05D001925 ORTHO05D004257 3.3e-07 58.9 138 34.1
Hma1.2p1_0780F.1_g216750 Hydrangea macrophylla HOM05D001925 ORTHO05D004257 3.3e-07 58.9 161 33.5
Hma1.2p1_0780F.1_g216780 Hydrangea macrophylla HOM05D001925 ORTHO05D004257 3.3e-07 58.9 161 33.5
Rhsim01G0159000 Rhododendron simsii HOM05D001925 ORTHO05D004257 3.3e-07 58.9 150 32.0
Sed0006621 Sechium edule HOM05D001925 ORTHO05D004257 3.3e-07 58.9 138 34.1
Solyc10g012420.3 Solanum lycopersicum HOM05D001925 ORTHO05D004257 4.4e-07 58.5 154 31.2
Cpa.g.sc11.19 Carica papaya HOM05D001925 ORTHO05D004257 5.7e-07 58.2 129 34.9
GSVIVG01026948001 Vitis vinifera HOM05D001925 ORTHO05D004257 5.7e-07 58.2 102 38.2
Cc02_g38170 Coffea canephora HOM05D001925 ORTHO05D004257 7.5e-07 57.8 144 32.6
Peaxi162Scf00008g02423 Petunia axillaris HOM05D001925 ORTHO05D004257 9.7e-07 57.4 135 32.6
CiPaw.01G062900 Carya illinoinensis HOM05D001925 ORTHO05D004257 1.3e-06 57.0 134 34.3
Eucgr.D02304 Eucalyptus grandis HOM05D001925 ORTHO05D004257 1.3e-06 57.0 133 33.8
Aa31LG5G590 Aethionema arabicum HOM05D001925 ORTHO05D004257 1.7e-06 56.6 138 32.6
Gohir.D11G094100 Gossypium hirsutum HOM05D001925 ORTHO05D004257 1.7e-06 56.6 154 33.8
Medtr2g027720 Medicago truncatula HOM05D001925 ORTHO05D004257 1.7e-06 56.6 117 34.2
arahy.Tifrunner.gnm1.ann1.2X3TQS Arachis hypogaea HOM05D001925 ORTHO05D004257 2.2e-06 56.2 146 35.6
Gohir.A11G089800 Gossypium hirsutum HOM05D001925 ORTHO05D004257 2.2e-06 56.2 151 33.8
unitig_749.g13536 Utricularia gibba HOM05D001925 ORTHO05D004257 4.8e-06 55.1 81 39.5
Migut.B01767 Erythranthe guttata HOM05D001925 ORTHO05D004257 6.3e-06 54.7 125 32.8


User provided reference genes

Program Settings