Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu051084.1 Olea europaea HOM05D007892 ORTHO05D009211 5.0e-140 501.1 260 100.0
Oeu037370.2 Olea europaea HOM05D007892 ORTHO05D009211 7.7e-56 221.5 276 51.4
MSTRG.6820 Avicennia marina HOM05D007892 ORTHO05D009211 2.3e-23 113.6 218 38.5
Migut.M00782 Erythranthe guttata HOM05D007892 ORTHO05D009211 2.0e-19 100.5 275 34.5
Cfa020559 Carpinus fangiana HOM05D007892 ORTHO05D009211 6.4e-18 95.5 237 32.9
Dinv14936 Davidia involucrata HOM05D007892 ORTHO05D009211 6.4e-18 95.5 267 31.8
Haze_09454 Corylus avellana HOM05D007892 ORTHO05D009211 7.0e-17 92.0 234 30.8
Lj1A840G45 Lonicera japonica HOM05D007892 ORTHO05D009211 3.5e-16 89.7 176 38.1
Dinv20199 Davidia involucrata HOM05D007892 ORTHO05D009211 6.0e-16 89.0 197 34.5
Actinidia09702 Actinidia chinensis HOM05D007892 ORTHO05D009211 5.0e-15 85.9 226 31.9
CiPaw.11G172000 Carya illinoinensis HOM05D007892 ORTHO05D009211 9.5e-14 81.6 196 32.1
CSS0005747 Camellia sinensis var. sinensis HOM05D007892 ORTHO05D009211 2.8e-13 80.1 189 34.9
CSS0030192 Camellia sinensis var. sinensis HOM05D007892 ORTHO05D009211 2.8e-13 80.1 189 34.9
DCAR_019569 Daucus carota HOM05D007892 ORTHO05D009211 8.0e-13 78.6 233 30.0
TAR626G1218 Trochodendron aralioides HOM05D007892 ORTHO05D009211 1.1e-12 78.2 231 29.4
Rhsim06G0202400 Rhododendron simsii HOM05D007892 ORTHO05D009211 1.2e-11 74.7 227 29.1
Gohir.A01G061400 Gossypium hirsutum HOM05D007892 ORTHO05D009211 1.5e-11 74.3 237 32.5
QL08p022727 Quercus lobata HOM05D007892 ORTHO05D009211 1.5e-11 74.3 207 30.9
Lsat_1_v5_gn_7_104640 Lactuca sativa HOM05D007892 ORTHO05D009211 3.4e-11 73.2 260 29.6
Solyc07g062920.4 Solanum lycopersicum HOM05D021138 ORTHO05D009211 3.4e-11 73.2 214 27.6
Sopen07g031110 Solanum pennellii HOM05D021138 ORTHO05D009211 3.4e-11 73.2 212 27.8
vmacro11887 Vaccinium macrocarpon HOM05D007892 ORTHO05D009211 3.4e-11 73.2 181 33.1
Duzib244G0002 Durio zibethinus HOM05D007892 ORTHO05D009211 4.4e-11 72.8 221 32.1
Duzib268G0896 Durio zibethinus HOM05D007892 ORTHO05D009211 4.4e-11 72.8 180 33.9
Gorai.002G067800 Gossypium raimondii HOM05D007892 ORTHO05D009211 4.4e-11 72.8 237 32.1
Nitab4.5_0005017g0030 Nicotiana tabacum HOM05D021138 ORTHO05D009211 4.4e-11 72.8 202 30.7
RcHm_v2.0_Chr5g0032741 Rosa chinensis HOM05D007892 ORTHO05D009211 4.4e-11 72.8 197 30.5
Cc05_g11770 Coffea canephora HOM05D007892 ORTHO05D009211 9.8e-11 71.6 161 34.2
COL.COLO4_36713 Corchorus olitorius HOM05D007892 ORTHO05D009211 1.7e-10 70.9 242 28.9
Nitab4.5_0002330g0130 Nicotiana tabacum HOM05D021138 ORTHO05D009211 1.7e-10 70.9 211 28.0
Gohir.D01G048000 Gossypium hirsutum HOM05D007892 ORTHO05D009211 2.9e-10 70.1 237 31.6
SGA_v2.0_scaffold73G24235 Striga asiatica HOM05D007892 ORTHO05D009211 2.9e-10 70.1 187 33.2
CANSAT56G4073 Cannabis sativa HOM05D007892 ORTHO05D009211 3.7e-10 69.7 182 35.2
PGSC0003DMG403012406 Solanum tuberosum HOM05D021138 ORTHO05D009211 6.4e-10 68.9 214 25.7
MD03G1231500 Malus domestica HOM05D007892 ORTHO05D009211 8.3e-10 68.6 243 28.4
TWI38G1391 Tripterygium wilfordii HOM05D007892 ORTHO05D009211 3.2e-09 66.6 239 24.3
GSVIVG01014294001 Vitis vinifera HOM05D007892 ORTHO05D009211 3.2e-09 66.6 217 29.0
arahy.Tifrunner.gnm1.ann1.8Q202K Arachis hypogaea HOM05D007892 ORTHO05D009211 7.0e-09 65.5 285 27.7
MD11G1252600 Malus domestica HOM05D007892 ORTHO05D009211 1.2e-08 64.7 197 31.0
Thecc.07G095700 Theobroma cacao HOM05D007892 ORTHO05D009211 2.1e-08 63.9 220 30.9
Duzib213G0678 Durio zibethinus HOM05D007892 ORTHO05D009211 6.0e-08 62.4 183 30.6
Prupe.4G176400 Prunus persica HOM05D007892 ORTHO05D009211 7.8e-08 62.0 208 30.3
Potri.011G115900 Populus trichocarpa HOM05D007892 ORTHO05D009211 1.0e-07 61.6 143 32.2
HanXRQChr11g0351991 Helianthus annuus HOM05D007892 ORTHO05D009211 1.3e-07 61.2 137 35.0
FvH4_3g19480 Fragaria vesca HOM05D007892 ORTHO05D009211 1.7e-07 60.8 151 33.1
Manes.15G089300 Manihot esculenta HOM05D007892 ORTHO05D009211 1.7e-07 60.8 261 26.4
Sabra11G0101600 Salix brachista HOM05D007892 ORTHO05D009211 2.3e-07 60.5 142 33.8
FAN16G1540 Fragaria x ananassa HOM05D007892 ORTHO05D009211 3.9e-07 59.7 151 31.1
FAN25G2763 Fragaria x ananassa HOM05D007892 ORTHO05D009211 8.6e-07 58.5 151 31.1
Sc03g0010140 Simmondsia chinensis HOM05D007892 ORTHO05D009211 8.6e-07 58.5 130 36.2
Eucgr.F01161 Eucalyptus grandis HOM05D007892 ORTHO05D009211 1.1e-06 58.2 199 27.1
FAN11G1893 Fragaria x ananassa HOM05D007892 ORTHO05D009211 1.1e-06 58.2 186 30.6
Potri.001G397001 Populus trichocarpa HOM05D007892 ORTHO05D009211 4.3e-06 56.2 170 30.6
ECA236G4021 Erigeron canadensis HOM05D000553 ORTHO05D009211 5.6e-06 55.8 152 32.2
Glyma.12G226900 Glycine max HOM05D007892 ORTHO05D009211 5.6e-06 55.8 203 31.0
FAN21G3246 Fragaria x ananassa HOM05D007892 ORTHO05D009211 7.3e-06 55.5 194 28.4
Nn1g06449 Nelumbo nucifera HOM05D007892 ORTHO05D009211 7.3e-06 55.5 187 29.9
MSTRG.10462 Avicennia marina HOM05D007892 ORTHO05D009211 9.5e-06 55.1 52 51.9


User provided reference genes

Program Settings