Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 3.6e-271 937.6 450 100.0
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 1.1e-211 740.0 450 78.0
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 7.2e-211 737.3 450 78.4
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 4.0e-209 731.5 450 76.7
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 5.2e-209 731.1 450 76.4
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 8.5e-204 713.8 450 75.8
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 1.2e-202 709.9 449 75.7
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 2.3e-201 705.7 450 73.3
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 3.0e-201 705.3 450 73.8
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 1.3e-199 699.9 449 73.7
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 2.8e-199 698.7 438 74.9
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 4.8e-199 698.0 449 73.7
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 3.1e-198 695.3 449 73.3
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 1.6e-197 693.0 440 75.0
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 3.5e-197 691.8 450 72.9
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 1.7e-196 689.5 435 74.0
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 2.5e-195 685.6 450 72.0
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 1.2e-194 683.3 432 74.5
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 1.6e-194 682.9 449 72.2
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 2.3e-193 679.1 439 72.2
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 6.8e-193 677.6 450 70.7
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 8.9e-193 677.2 439 73.1
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 1.5e-192 676.4 450 71.6
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 2.0e-192 676.0 450 71.3
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 2.6e-192 675.6 452 69.2
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 9.8e-192 673.7 452 70.4
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 2.2e-191 672.5 450 72.2
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 4.9e-191 671.4 438 73.7
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 1.8e-190 669.5 450 69.3
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 2.4e-190 669.1 449 70.2
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 3.1e-190 668.7 447 70.7
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 2.0e-189 666.0 438 73.1
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 7.8e-189 664.1 447 70.7
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 7.8e-189 664.1 445 70.1
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 1.0e-188 663.7 450 70.0
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 1.7e-188 662.9 450 70.0
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 1.7e-188 662.9 450 71.3
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 2.3e-188 662.5 451 69.8
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 5.0e-188 661.4 450 70.4
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 1.1e-187 660.2 450 69.8
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 1.5e-187 659.8 450 69.6
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 1.5e-187 659.8 450 69.8
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 1.9e-187 659.4 450 70.9
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 1.9e-187 659.4 451 69.6
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 5.6e-187 657.9 450 70.0
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 9.5e-187 657.1 445 68.3
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 9.5e-187 657.1 450 69.6
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 9.5e-187 657.1 451 69.6
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 9.5e-187 657.1 450 68.4
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 9.5e-187 657.1 450 68.2
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 3.6e-186 655.2 450 69.3
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 4.7e-186 654.8 450 69.1
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 8.0e-186 654.1 450 69.3
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 1.8e-185 652.9 438 71.7
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 4.0e-185 651.7 445 67.9
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 4.0e-185 651.7 430 71.2
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 4.0e-185 651.7 450 69.3
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 1.5e-184 649.8 450 70.0
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 2.9e-183 645.6 450 67.1
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 2.9e-183 645.6 450 70.4
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 4.9e-183 644.8 438 69.4
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 4.9e-183 644.8 450 67.1
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 1.1e-182 643.7 450 67.8
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 2.4e-182 642.5 450 66.0
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 9.2e-182 640.6 421 70.1
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 1.2e-181 640.2 450 68.9
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 2.0e-181 639.4 427 71.7
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 3.0e-180 635.6 453 66.7
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 3.9e-180 635.2 434 70.3
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 5.0e-180 634.8 451 68.3
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 1.5e-179 633.3 438 68.5
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 3.3e-179 632.1 438 67.1
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 9.5e-179 630.6 448 68.8
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 8.0e-178 627.5 451 67.0
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 9.8e-176 620.5 450 65.3
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 1.3e-175 620.2 487 63.0
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 1.4e-174 616.7 461 65.5
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 1.4e-174 616.7 450 63.1
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 4.1e-174 615.1 566 56.4
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.2e-173 613.6 445 65.8
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 2.3e-172 609.4 483 64.0
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 5.2e-169 598.2 438 65.8
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 2.1e-162 576.2 448 60.5
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 2.8e-162 575.9 439 63.6
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 1.1e-158 563.9 438 62.1
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 1.1e-153 547.4 448 60.3
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 5.8e-152 541.6 418 62.4
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 7.1e-150 534.6 440 59.8
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 6.6e-148 528.1 409 63.3
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 8.1e-146 521.2 339 71.7
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 1.4e-145 520.4 339 72.0
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 4.2e-142 508.8 389 64.0
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 9.3e-134 481.1 415 60.0
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 2.3e-132 476.5 450 55.8
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 1.4e-97 360.9 214 78.5
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 3.4e-91 339.7 370 42.2
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 2.8e-90 336.7 229 70.7
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 4.8e-90 335.9 231 71.9
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 2.7e-80 303.5 372 41.7
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 4.2e-78 296.2 372 39.0
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 1.2e-67 261.5 394 33.0
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 1.9e-57 227.6 306 37.6
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 9.6e-46 188.7 131 69.5
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 2.3e-39 167.5 103 70.9
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 1.1e-36 158.7 103 68.0
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 1.1e-36 158.7 103 68.0
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 1.1e-36 158.7 103 68.0
Sabra11G0103000 Salix brachista HOM05D006845 ORTHO05D009300 2.4e-36 157.5 85 81.2
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 1.0e-31 142.1 142 55.6
FAN12G2298 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.4e-12 78.6 49 67.3
FAN05G4902 Fragaria x ananassa HOM05D006845 ORTHO05D014206 3.1e-12 77.4 50 66.0
FAN25G3098 Fragaria x ananassa HOM05D006845 ORTHO05D014206 4.1e-12 77.0 49 67.3
Hma1.2p1_0554F.1_g177810 Hydrangea macrophylla HOM05D006845 ORTHO05D014206 5.0e-10 70.1 45 68.9
FAN09G2373 Fragaria x ananassa HOM05D006845 ORTHO05D014206 4.2e-09 67.0 48 60.4
MBI02_g32976_MAGBIO Magnolia biondii HOM05D000872 ORTHO05D014206 7.1e-09 66.2 47 63.8


User provided reference genes

Program Settings