Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu051017.1 Olea europaea HOM05D020362 ORTHO05D030297 3.8e-194 681.4 363 100.0
Oeu004412.3 Olea europaea HOM05D006007 ORTHO05D007518 3.8e-29 133.3 137 73.0
Oeu032273.1 Olea europaea HOM05D020362 ORTHO05D030297 3.6e-27 126.7 149 51.0
Oeu034932.1 Olea europaea HOM05D020362 ORTHO05D030297 1.2e-19 101.7 105 55.2
MSTRG.23885 Avicennia marina HOM05D006007 ORTHO05D007518 9.8e-17 92.0 128 44.5
SGA_v2.0_scaffold52G19163 Striga asiatica HOM05D020362 ORTHO05D030297 3.2e-15 87.0 154 39.0
Lj4A118G52 Lonicera japonica HOM05D006007 ORTHO05D007518 6.6e-13 79.3 135 40.0
TAR264G0002 Trochodendron aralioides HOM05D006007 ORTHO05D007518 2.8e-11 73.9 134 44.0
FAN05G3222 Fragaria x ananassa HOM05D006007 ORTHO05D007518 4.7e-11 73.2 136 34.6
FAN09G0451 Fragaria x ananassa HOM05D006007 ORTHO05D007518 1.4e-10 71.6 136 36.0
QL02p067640 Quercus lobata HOM05D006007 ORTHO05D007518 3.1e-10 70.5 134 40.3
Cc07_g04190 Coffea canephora HOM05D006007 ORTHO05D007518 1.2e-09 68.6 139 38.8
Cfa007665 Carpinus fangiana HOM05D006007 ORTHO05D007518 2.0e-09 67.8 138 32.6
CSS0026219 Camellia sinensis var. sinensis HOM05D006007 ORTHO05D007518 9.8e-09 65.5 135 43.7
Phvul.008G033600 Phaseolus vulgaris HOM05D006007 ORTHO05D007518 1.7e-08 64.7 121 35.5
GSVIVG01032902001 Vitis vinifera HOM05D006007 ORTHO05D007518 3.7e-08 63.5 132 42.4
TWI32G0586 Tripterygium wilfordii HOM05D006007 ORTHO05D007518 6.4e-08 62.8 127 48.8
CiPaw.03G088800 Carya illinoinensis HOM05D006007 ORTHO05D007518 8.3e-08 62.4 142 33.1
CAN.G398.20 Capsicum annuum HOM05D006007 ORTHO05D007518 3.2e-07 60.5 64 54.7
CSS0007202 Camellia sinensis var. sinensis HOM05D006007 ORTHO05D007518 5.4e-07 59.7 148 38.5
Nn4g23426 Nelumbo nucifera HOM05D006007 ORTHO05D007518 5.4e-07 59.7 153 40.5
Sed0005820 Sechium edule HOM05D006007 ORTHO05D007518 5.4e-07 59.7 140 37.1
FAN02G0083 Fragaria x ananassa HOM05D006007 ORTHO05D007518 7.0e-07 59.3 133 41.4
PGSC0003DMG400025145 Solanum tuberosum HOM05D006007 ORTHO05D007518 7.0e-07 59.3 145 46.2
Nitab4.5_0000212g0230 Nicotiana tabacum HOM05D006007 ORTHO05D007518 9.2e-07 58.9 138 39.1
Rhsim10G0048800 Rhododendron simsii HOM05D006007 ORTHO05D007518 9.2e-07 58.9 53 62.3
RcHm_v2.0_Chr2g0165881 Rosa chinensis HOM05D006007 ORTHO05D007518 2.1e-06 57.8 130 44.6
arahy.Tifrunner.gnm1.ann1.EQE0CJ Arachis hypogaea HOM05D006007 ORTHO05D007518 2.7e-06 57.4 138 43.5
arahy.Tifrunner.gnm1.ann1.J3LTHX Arachis hypogaea HOM05D006007 ORTHO05D007518 2.7e-06 57.4 138 43.5
FAN14G4567 Fragaria x ananassa HOM05D006007 ORTHO05D007518 6.0e-06 56.2 145 39.3


User provided reference genes

Program Settings