Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu050987.1 Olea europaea HOM05D004909 ORTHO05D009625 0.0e+00 1521.9 767 100.0
Oeu050988.1 Olea europaea HOM05D004909 ORTHO05D009625 0.0e+00 1281.5 798 84.0
SEGI_22240 Sequoiadendron giganteum HOM05D004909 ORTHO05D009316 3.8e-135 486.5 887 37.3
RcHm_v2.0_Chr6g0256711 Rosa chinensis HOM05D004909 ORTHO05D009625 5.5e-118 429.5 529 47.8
Actinidia34900 Actinidia chinensis HOM05D004909 ORTHO05D009316 2.5e-110 404.1 896 33.0
Sed0007601 Sechium edule HOM05D004909 ORTHO05D009316 1.8e-97 361.3 341 58.9
PGR044G1103 Punica granatum HOM05D004909 ORTHO05D009625 5.3e-97 359.8 535 41.7
PGR004G1782 Punica granatum HOM05D004909 ORTHO05D009625 2.6e-96 357.5 535 41.5
Aqoxy2G02242 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 2.7e-85 320.9 388 47.2
RcHm_v2.0_Chr6g0256721 Rosa chinensis HOM05D006604 ORTHO05D007974 3.8e-79 300.4 349 47.6
DCAR_032461 Daucus carota HOM05D004909 ORTHO05D009625 7.2e-78 296.2 543 36.8
Aqoxy3G01129 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 9.5e-70 269.2 388 42.5
EL10Ac7g16727 Beta vulgaris HOM05D004909 ORTHO05D009625 1.6e-56 225.3 519 32.6
CAN.G1001.42 Capsicum annuum HOM05D004909 ORTHO05D009625 3.5e-56 224.2 240 49.2
AUR62042351 Chenopodium quinoa HOM05D004909 ORTHO05D009316 4.6e-56 223.8 832 27.6
SHI38062 Sapria himalayana HOM05D004909 ORTHO05D009625 1.0e-55 222.6 290 46.9
EL10Ac1g02203 Beta vulgaris HOM05D004909 ORTHO05D009625 2.3e-55 221.5 351 40.5
Sc11g0004480 Simmondsia chinensis HOM05D004909 ORTHO05D009625 4.0e-52 210.7 250 46.8
VMungo1067G0003 Vigna mungo HOM05D004909 ORTHO05D009625 4.4e-51 207.2 538 30.5
Cc00_g11440 Coffea canephora HOM05D004909 ORTHO05D009625 7.5e-51 206.5 255 45.9
TWI14G0838 Tripterygium wilfordii HOM05D004909 ORTHO05D009316 7.8e-48 196.4 349 37.8
AUR62044036 Chenopodium quinoa HOM05D004909 ORTHO05D009625 1.7e-47 195.3 443 32.1
Solyc05g045720.1 Solanum lycopersicum HOM05D004909 ORTHO05D009625 1.9e-46 191.8 342 37.7
Hma1.2p1_0295F.1_g116730 Hydrangea macrophylla HOM05D004909 ORTHO05D009625 9.5e-46 189.5 231 44.2
Sc13g0007740 Simmondsia chinensis HOM05D004909 ORTHO05D009316 3.6e-45 187.6 349 36.7
SHI49389 Sapria himalayana HOM05D004909 ORTHO05D009625 1.1e-44 186.0 246 45.9
Nitab4.5_0000081g0150 Nicotiana tabacum HOM05D004909 ORTHO05D009625 5.4e-41 173.7 471 31.0
Sed0005050 Sechium edule HOM05D004909 ORTHO05D009316 2.7e-40 171.4 897 23.9
AUR62026823 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.7e-39 168.7 213 43.2
SHI49457 Sapria himalayana HOM05D004909 ORTHO05D009625 1.9e-38 165.2 211 47.9
CsaV3_UNG207890 Cucumis sativus L. HOM05D004909 ORTHO05D009625 2.5e-38 164.9 266 40.2
Glyma.15G187700 Glycine max HOM05D004909 ORTHO05D009316 5.6e-38 163.7 339 34.2
SHI46715 Sapria himalayana HOM05D004909 ORTHO05D009625 6.2e-37 160.2 208 45.7
AUR62042355 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.1e-36 159.5 253 37.5
AUR62043789 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.1e-36 159.5 253 37.5
AUR62043900 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.1e-36 159.5 253 37.5
SHI35986 Sapria himalayana HOM05D004909 ORTHO05D009625 2.4e-36 158.3 224 44.6
EL10Ac7g16726 Beta vulgaris HOM05D004909 ORTHO05D009316 1.5e-35 155.6 345 30.7
SHI34934 Sapria himalayana HOM05D004909 ORTHO05D009316 3.8e-34 151.0 289 37.0
SHI40430 Sapria himalayana HOM05D004909 ORTHO05D009625 8.4e-34 149.8 268 38.4
RcHm_v2.0_MTg0498751 Rosa chinensis HOM05D004909 ORTHO05D009625 1.4e-33 149.1 247 36.4
SHI35584 Sapria himalayana HOM05D004909 ORTHO05D009316 4.6e-32 144.1 182 46.7
SHI41761 Sapria himalayana HOM05D004909 ORTHO05D009625 4.6e-32 144.1 169 49.1
THA.LOC109116692 Tarenaya hassleriana HOM05D004909 ORTHO05D009316 3.0e-31 141.4 164 45.7
Aqoxy2G02244 Aquilegia oxysepala HOM05D004909 ORTHO05D009316 1.6e-29 135.6 299 33.1
Aqoxy3G01127 Aquilegia oxysepala HOM05D004909 ORTHO05D009316 1.6e-29 135.6 299 33.1
EL10As7g23793 Beta vulgaris HOM05D004909 ORTHO05D009928 7.6e-27 126.7 207 36.7
PSO063G2824 Papaver somniferum HOM05D004909 ORTHO05D009625 1.1e-25 122.9 273 34.1
Lalb_Chr00c21g0405621 Lupinus albus HOM05D004909 ORTHO05D009316 5.4e-25 120.6 157 42.0
SHI43987 Sapria himalayana HOM05D004909 ORTHO05D009625 9.3e-25 119.8 133 52.6
AUR62010529 Chenopodium quinoa HOM05D004909 ORTHO05D005619 1.0e-23 116.3 271 35.8
Sc14g0003260 Simmondsia chinensis HOM05D004909 ORTHO05D009625 3.9e-23 114.4 221 34.4
EL10Ac1g02201 Beta vulgaris HOM05D004909 ORTHO05D009316 2.5e-22 111.7 247 33.2
CAN.G335.18 Capsicum annuum HOM05D004909 ORTHO05D009625 4.3e-22 110.9 137 42.3
Nitab4.5_0010033g0040 Nicotiana tabacum HOM05D004909 ORTHO05D009316 1.6e-21 109.0 183 38.8
SHI35576 Sapria himalayana HOM05D004909 ORTHO05D009625 1.8e-20 105.5 100 56.0
Nitab4.5_0005140g0040 Nicotiana tabacum HOM05D004909 ORTHO05D009625 1.2e-19 102.8 288 31.2
Nitab4.5_0000014g0460 Nicotiana tabacum HOM05D004909 ORTHO05D009625 7.6e-19 100.1 155 40.0
HPP92_026900 Vanilla planifolia HOM05D004909 ORTHO05D009316 1.3e-18 99.4 120 43.3
DCAR_032462 Daucus carota HOM05D004909 ORTHO05D009316 6.4e-18 97.1 231 32.9
Solyc05g045890.1 Solanum lycopersicum HOM05D004909 ORTHO05D009625 5.5e-17 94.0 242 32.2
arahy.Tifrunner.gnm1.ann1.HS2KB4 Arachis hypogaea HOM05D004909 ORTHO05D009316 9.3e-17 93.2 92 54.3
Sed0025836 Sechium edule HOM05D004909 ORTHO05D009316 9.3e-17 93.2 74 62.2
CAN.G505.9 Capsicum annuum HOM05D004909 ORTHO05D009316 3.5e-16 91.3 99 46.5
Potri.007G061821 Populus trichocarpa HOM05D004909 ORTHO05D009316 4.6e-16 90.9 164 37.8
Nitab4.5_0001526g0140 Nicotiana tabacum HOM05D004909 ORTHO05D009316 6.0e-16 90.5 167 35.3
Duzib116G0563 Durio zibethinus HOM05D004909 ORTHO05D009625 1.1e-14 86.3 140 37.1
CsaV3_UNG207880 Cucumis sativus L. HOM05D004909 ORTHO05D009625 4.3e-14 84.3 105 42.9
SHI39947 Sapria himalayana HOM05D004909 ORTHO05D009625 4.8e-13 80.9 87 48.3
SGA_v2.0_scaffold119G32792 Striga asiatica HOM05D004909 ORTHO05D009625 6.2e-13 80.5 88 51.1
Aqoxy2G02243 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 1.1e-12 79.7 84 48.8
Aqoxy3G01128 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 1.1e-12 79.7 84 48.8
EL10Ac1g01430 Beta vulgaris HOM05D004909 ORTHO05D009625 1.4e-12 79.3 80 47.5
EL10Ac1g01432 Beta vulgaris HOM05D004909 ORTHO05D009316 1.8e-12 79.0 138 38.4
Sopen05g027030 Solanum pennellii HOM05D000213 ORTHO05D011567 1.8e-12 79.0 107 40.2
Sopen05g027060 Solanum pennellii HOM05D000213 ORTHO05D011567 1.8e-12 79.0 119 37.0
Peaxi162Scf00651g00626 Petunia axillaris HOM05D004909 ORTHO05D009316 6.9e-12 77.0 338 25.7
Oeu022816.1 Olea europaea HOM05D004909 ORTHO05D009316 3.4e-11 74.7 40 85.0
SHI41760 Sapria himalayana HOM05D009967 ORTHO05D009625 5.8e-11 73.9 77 53.2
SHI29963 Sapria himalayana HOM05D009967 ORTHO05D009625 7.6e-11 73.6 73 56.2
vmacro17405 Vaccinium macrocarpon HOM05D004909 ORTHO05D009316 7.6e-11 73.6 74 51.4
EL10Ac1g02202 Beta vulgaris HOM05D004909 ORTHO05D009625 1.0e-10 73.2 66 53.0
arahy.Tifrunner.gnm1.ann1.0IJH8U Arachis hypogaea HOM05D012997 ORTHO05D014434 1.3e-10 72.8 64 57.8
Lj2A1227T106 Lonicera japonica HOM05D004909 ORTHO05D009316 1.7e-10 72.4 76 55.3
SHI29964 Sapria himalayana HOM05D004909 ORTHO05D009625 5.5e-09 67.4 95 42.1
Nitab4.5_0002276g0060 Nicotiana tabacum HOM05D004909 ORTHO05D009316 1.6e-08 65.9 46 71.7
CAN.G490.20 Capsicum annuum HOM05D004909 ORTHO05D009625 2.7e-08 65.1 208 28.8
Lsat_1_v5_gn_5_24721 Lactuca sativa HOM05D001793 ORTHO05D001938 3.5e-08 64.7 47 59.6
CAN.G505.15 Capsicum annuum HOM05D004909 ORTHO05D009316 1.0e-07 63.2 63 47.6
SHI51920 Sapria himalayana HOM05D009967 ORTHO05D009625 2.3e-07 62.0 69 49.3
SGA_v2.0_scaffold255G45542 Striga asiatica HOM05D004909 ORTHO05D009625 3.9e-07 61.2 82 42.7
Sc02g0004080 Simmondsia chinensis HOM05D004909 ORTHO05D009316 6.7e-07 60.5 159 34.6
CAN.G1858.5 Capsicum annuum HOM05D004909 ORTHO05D009316 2.5e-06 58.5 239 24.3


User provided reference genes

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