Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu050916.1 Olea europaea HOM05D004006 ORTHO05D004585 7.2e-107 390.6 195 100.0
Oeu050917.2 Olea europaea HOM05D004006 ORTHO05D004585 2.1e-106 389.0 195 99.5
Dinv27317 Davidia involucrata HOM05D004006 ORTHO05D004585 6.8e-57 224.6 200 57.5
MSTRG.1442 Avicennia marina HOM05D004006 ORTHO05D004585 6.4e-55 218.0 198 58.6
Cc10_g11860 Coffea canephora HOM05D004006 ORTHO05D004585 1.7e-52 209.9 208 56.2
Manes.18G077000 Manihot esculenta HOM05D004006 ORTHO05D004585 8.6e-52 207.6 212 54.2
MSTRG.22410 Avicennia marina HOM05D004006 ORTHO05D004585 6.2e-50 201.4 201 52.7
Thecc.08G124900 Theobroma cacao HOM05D004006 ORTHO05D004585 8.1e-50 201.1 213 54.9
TAR628G0258 Trochodendron aralioides HOM05D004006 ORTHO05D004585 1.1e-49 200.7 198 54.0
Hma1.2p1_0186F.1_g081800 Hydrangea macrophylla HOM05D004006 ORTHO05D004585 1.8e-49 199.9 207 54.1
Prupe.1G498100 Prunus persica HOM05D004006 ORTHO05D004585 3.1e-49 199.1 211 52.1
Duzib093G0488 Durio zibethinus HOM05D004006 ORTHO05D004585 4.0e-49 198.7 211 54.5
MSTRG.25384 Avicennia marina HOM05D004006 ORTHO05D004585 7.5e-48 194.5 198 56.1
MD08G1163000 Malus domestica HOM05D004006 ORTHO05D004585 9.9e-48 194.1 212 51.4
Duzib116G0782 Durio zibethinus HOM05D004006 ORTHO05D004585 1.7e-47 193.4 209 54.5
Nn5g28281 Nelumbo nucifera HOM05D004006 ORTHO05D004585 2.2e-47 193.0 204 52.9
Sed0014468 Sechium edule HOM05D004006 ORTHO05D004585 2.2e-47 193.0 197 52.3
FAN24G3177 Fragaria x ananassa HOM05D004006 ORTHO05D004585 6.4e-47 191.4 199 54.3
Nn1g08787 Nelumbo nucifera HOM05D004006 ORTHO05D004585 1.4e-46 190.3 203 51.7
RcHm_v2.0_Chr6g0295711 Rosa chinensis HOM05D004006 ORTHO05D004585 2.4e-46 189.5 198 53.0
COL.COLO4_35922 Corchorus olitorius HOM05D004006 ORTHO05D004585 3.2e-46 189.1 216 54.2
FAN27G3464 Fragaria x ananassa HOM05D004006 ORTHO05D004585 5.4e-46 188.3 198 54.0
TAR376G1087 Trochodendron aralioides HOM05D004006 ORTHO05D004585 9.2e-46 187.6 200 55.5
FvH4_2g26860 Fragaria vesca HOM05D004006 ORTHO05D004585 1.6e-45 186.8 193 53.9
Gohir.D01G180600 Gossypium hirsutum HOM05D004006 ORTHO05D004585 1.6e-45 186.8 208 54.8
Gorai.002G222000 Gossypium raimondii HOM05D004006 ORTHO05D004585 1.6e-45 186.8 208 54.8
MD15G1349700 Malus domestica HOM05D004006 ORTHO05D004585 2.7e-45 186.0 218 48.2
FAN20G2831 Fragaria x ananassa HOM05D004006 ORTHO05D004585 4.6e-45 185.3 198 53.0
CsaV3_6G034510 Cucumis sativus L. HOM05D004006 ORTHO05D004585 7.8e-45 184.5 197 53.3
Potri.002G083900 Populus trichocarpa HOM05D004006 ORTHO05D004585 7.8e-45 184.5 212 47.2
vmacro00834 Vaccinium macrocarpon HOM05D004006 ORTHO05D004585 7.8e-45 184.5 203 51.2
ClCG08G005630 Citrullus lanatus HOM05D004006 ORTHO05D004585 1.3e-44 183.7 197 51.8
Gohir.A01G188900 Gossypium hirsutum HOM05D004006 ORTHO05D004585 2.3e-44 183.0 205 53.7
Manes.02G162900 Manihot esculenta HOM05D004006 ORTHO05D004585 3.9e-44 182.2 208 46.2
CSS0019596 Camellia sinensis var. sinensis HOM05D004006 ORTHO05D004585 1.9e-43 179.9 209 51.7
MELO3C010605.2 Cucumis melo HOM05D004006 ORTHO05D004585 2.5e-43 179.5 197 52.3
CSS0040709 Camellia sinensis var. sinensis HOM05D004006 ORTHO05D004585 7.3e-43 177.9 209 53.6
Eucgr.F04353 Eucalyptus grandis HOM05D004006 ORTHO05D004585 1.6e-42 176.8 233 46.4
SGA_v2.0_scaffold52G18967 Striga asiatica HOM05D004006 ORTHO05D004585 2.1e-42 176.4 207 51.2
CiPaw.06G030700 Carya illinoinensis HOM05D004006 ORTHO05D004585 2.8e-42 176.0 220 49.5
Gorai.009G245700 Gossypium raimondii HOM05D004006 ORTHO05D004585 3.6e-42 175.6 215 49.3
Gohir.A05G235000 Gossypium hirsutum HOM05D004006 ORTHO05D004585 8.1e-42 174.5 215 48.8
Gohir.D05G237300 Gossypium hirsutum HOM05D004006 ORTHO05D004585 8.1e-42 174.5 215 49.3
Oeu047951.1 Olea europaea HOM05D004006 ORTHO05D004585 8.1e-42 174.5 185 51.4
Lj7P340T24 Lonicera japonica HOM05D004006 ORTHO05D004585 3.1e-41 172.6 202 49.5
Migut.C01125 Erythranthe guttata HOM05D004006 ORTHO05D004585 4.0e-41 172.2 199 49.7
GSVIVG01008871001 Vitis vinifera HOM05D004006 ORTHO05D004585 4.0e-41 172.2 185 53.0
Potri.005G177600 Populus trichocarpa HOM05D004006 ORTHO05D004585 8.9e-41 171.0 204 45.6
PGR044G2543 Punica granatum HOM05D004006 ORTHO05D004585 2.6e-40 169.5 231 43.3
Nitab4.5_0016080g0010 Nicotiana tabacum HOM05D004006 ORTHO05D004585 9.9e-40 167.5 215 49.8
Duzib041G0805 Durio zibethinus HOM05D004006 ORTHO05D004585 1.7e-39 166.8 179 50.8
Haze_00445 Corylus avellana HOM05D004006 ORTHO05D004585 2.2e-39 166.4 210 44.8
RhsimUnG0092700 Rhododendron simsii HOM05D004006 ORTHO05D004585 6.4e-39 164.9 197 46.7
TWI56G0850 Tripterygium wilfordii HOM05D004006 ORTHO05D004585 8.4e-39 164.5 215 45.1
Oeu059434.1 Olea europaea HOM05D004006 ORTHO05D004585 1.1e-38 164.1 186 50.5
Cfa016015 Carpinus fangiana HOM05D004006 ORTHO05D004585 1.9e-38 163.3 211 44.1
Peaxi162Scf00018g00027 Petunia axillaris HOM05D004006 ORTHO05D004585 4.1e-38 162.2 225 48.0
Gorai.005G089800 Gossypium raimondii HOM05D004006 ORTHO05D004585 5.4e-38 161.8 219 47.0
Lj1g0016270 Lotus japonicus HOM05D004006 ORTHO05D004585 5.4e-38 161.8 211 48.3
Gohir.D02G080400 Gossypium hirsutum HOM05D004006 ORTHO05D004585 1.6e-37 160.2 220 46.4
Oeu026152.1 Olea europaea HOM05D004006 ORTHO05D004585 1.6e-37 160.2 190 54.2
PGSC0003DMG400027788 Solanum tuberosum HOM05D004006 ORTHO05D004585 3.5e-37 159.1 212 45.3
Glyma.04G249900 Glycine max HOM05D004006 ORTHO05D004585 1.0e-36 157.5 202 44.6
Gohir.A02G073100 Gossypium hirsutum HOM05D004006 ORTHO05D004585 1.3e-36 157.1 220 45.5
Phvul.009G124900 Phaseolus vulgaris HOM05D004006 ORTHO05D004585 1.3e-36 157.1 206 43.7
Glyma.06G113000 Glycine max HOM05D004006 ORTHO05D004585 3.0e-36 156.0 202 44.6
TWI36G0058 Tripterygium wilfordii HOM05D004006 ORTHO05D004585 3.0e-36 156.0 224 42.9
TPR.G21067 Trifolium pratense HOM05D004006 ORTHO05D004585 3.9e-36 155.6 227 42.7
Dinv07222 Davidia involucrata HOM05D004006 ORTHO05D004585 5.1e-36 155.2 161 57.1
Actinidia21321 Actinidia chinensis HOM05D004006 ORTHO05D004585 8.6e-36 154.5 213 46.5
CARHR022190 Cardamine hirsuta HOM05D004006 ORTHO05D004585 8.6e-36 154.5 204 46.6
Thhalv10008805m.g Eutrema salsugineum HOM05D004006 ORTHO05D004585 1.9e-35 153.3 204 44.6
Lalb_Chr08g0241451 Lupinus albus HOM05D004006 ORTHO05D004585 2.5e-35 152.9 207 44.4
Solyc11g013450.2 Solanum lycopersicum HOM05D004006 ORTHO05D004585 4.3e-35 152.1 214 43.5
BcaC07g39124 Brassica carinata HOM05D004006 ORTHO05D004585 7.3e-35 151.4 208 45.7
C08p21130 Brassica napus HOM05D004006 ORTHO05D004585 7.3e-35 151.4 208 45.7
BolC8t49750H Brassica oleracea HOM05D004006 ORTHO05D004585 7.3e-35 151.4 208 45.7
Ciclev10002301m.g Citrus clementina HOM05D004006 ORTHO05D004585 9.6e-35 151.0 230 43.9
Aqoxy6G00215 Aquilegia oxysepala HOM05D004006 ORTHO05D004585 1.2e-34 150.6 223 42.6
Ca_16556_v3 Cicer arietinum L. HOM05D004006 ORTHO05D004585 1.6e-34 150.2 222 41.0
A06p17910 Brassica napus HOM05D004006 ORTHO05D004585 2.1e-34 149.8 208 44.7
BraA06t24881Z Brassica rapa HOM05D004006 ORTHO05D004585 2.8e-34 149.4 208 44.2
SGA_v2.0_scaffold24G10460 Striga asiatica HOM05D004006 ORTHO05D004585 3.6e-34 149.1 186 47.8
THA.LOC104813655 Tarenaya hassleriana HOM05D004006 ORTHO05D004585 3.6e-34 149.1 205 46.3
BcaB07g32181 Brassica carinata HOM05D004006 ORTHO05D004585 4.7e-34 148.7 205 44.4
BcaC05g26103 Brassica carinata HOM05D004006 ORTHO05D004585 4.7e-34 148.7 205 44.4
C05p20810 Brassica napus HOM05D004006 ORTHO05D004585 4.7e-34 148.7 205 44.4
A08p28790 Brassica napus HOM05D004006 ORTHO05D004585 6.2e-34 148.3 208 44.2
BraA08t34808Z Brassica rapa HOM05D004006 ORTHO05D004585 6.2e-34 148.3 208 44.2
Sp1g19380 Schrenkiella parvula HOM05D004006 ORTHO05D004585 6.2e-34 148.3 207 45.9
THA.LOC104800196 Tarenaya hassleriana HOM05D004006 ORTHO05D004585 1.1e-33 147.5 208 44.7
BolC5t30780H Brassica oleracea HOM05D004006 ORTHO05D004585 1.4e-33 147.1 205 43.9
Glyma.13G079800 Glycine max HOM05D004006 ORTHO05D004585 1.4e-33 147.1 195 43.6
BcaB03g11881 Brassica carinata HOM05D004006 ORTHO05D004585 2.4e-33 146.4 193 45.1
AL1G35020 Arabidopsis lyrata HOM05D004006 ORTHO05D004585 3.1e-33 146.0 207 44.4
AT1G21830 Arabidopsis thaliana HOM05D004006 ORTHO05D004585 5.2e-33 145.2 208 45.2
Medtr3g088010 Medicago truncatula HOM05D004006 ORTHO05D004585 5.2e-33 145.2 217 41.5
Nitab4.5_0000051g0220 Nicotiana tabacum HOM05D004006 ORTHO05D004585 5.2e-33 145.2 215 45.1
VMungo1309G2318 Vigna mungo HOM05D004006 ORTHO05D004585 1.2e-32 144.1 203 42.9
CDE02G3357 Ceratophyllum demersum HOM05D004006 ORTHO05D004585 2.0e-32 143.3 196 43.9
Carub.0001s2127 Capsella rubella HOM05D004006 ORTHO05D004585 2.6e-32 142.9 211 45.5
MBI16_g07656_MAGBIO Magnolia biondii HOM05D004006 ORTHO05D004585 2.6e-32 142.9 184 46.7
CANSAT25G0779 Cannabis sativa HOM05D004006 ORTHO05D004585 5.8e-32 141.7 250 40.0
BcaB03g14254 Brassica carinata HOM05D004006 ORTHO05D004585 9.9e-32 141.0 206 43.2
Psat5g087920 Pisum sativum HOM05D004006 ORTHO05D004585 9.9e-32 141.0 205 42.4
Lalb_Chr23g0271011 Lupinus albus HOM05D004006 ORTHO05D004585 1.3e-31 140.6 199 44.7
Rhsim06G0103600 Rhododendron simsii HOM05D004006 ORTHO05D004585 1.7e-31 140.2 211 45.5
arahy.Tifrunner.gnm1.ann1.CFE04G Arachis hypogaea HOM05D004006 ORTHO05D004585 2.9e-31 139.4 221 40.3
arahy.Tifrunner.gnm1.ann1.J26PKP Arachis hypogaea HOM05D004006 ORTHO05D004585 4.9e-31 138.7 223 40.4
BcaC06g34904 Brassica carinata HOM05D004006 ORTHO05D004585 4.9e-31 138.7 207 43.0
C07p21950 Brassica napus HOM05D004006 ORTHO05D004585 4.9e-31 138.7 207 43.0
BolC7t42725H Brassica oleracea HOM05D004006 ORTHO05D004585 4.9e-31 138.7 207 43.0
CDE08G0380 Ceratophyllum demersum HOM05D004006 ORTHO05D004585 6.4e-31 138.3 169 46.7
BcaB07g32179 Brassica carinata HOM05D004006 ORTHO05D004585 8.4e-31 137.9 205 42.9
A07p14920 Brassica napus HOM05D004006 ORTHO05D004585 3.2e-30 136.0 207 42.5
BraA07t29235Z Brassica rapa HOM05D004006 ORTHO05D004585 3.2e-30 136.0 207 42.5
Actinidia29465 Actinidia chinensis HOM05D004006 ORTHO05D004585 7.1e-30 134.8 212 41.0
Atru.chr13.1448 Acer truncatum HOM05D004006 ORTHO05D004585 1.2e-29 134.0 200 43.5
Atru.chr13.1472 Acer truncatum HOM05D004006 ORTHO05D004585 1.2e-29 134.0 200 43.5
ATR0584G004 Amborella trichopoda HOM05D004006 ORTHO05D004585 2.1e-29 133.3 201 43.3
MBI09_g12159_MAGBIO Magnolia biondii HOM05D004006 ORTHO05D004585 2.1e-29 133.3 187 43.3
Lalb_Chr10g0101721 Lupinus albus HOM05D004006 ORTHO05D004585 2.7e-29 132.9 210 41.9
SalBow6G7056 Salvia bowleyana HOM05D004006 ORTHO05D004585 2.7e-29 132.9 161 48.4
Actinidia03470 Actinidia chinensis HOM05D004006 ORTHO05D004585 7.8e-29 131.3 181 44.2
Migut.N03284 Erythranthe guttata HOM05D004006 ORTHO05D004585 7.8e-29 131.3 174 44.3
Glyma.14G150000 Glycine max HOM05D004006 ORTHO05D004585 1.0e-28 131.0 184 45.1
EL10Ac1g01007 Beta vulgaris HOM05D004006 ORTHO05D004585 1.3e-28 130.6 245 43.3
DCAR_014087 Daucus carota HOM05D004006 ORTHO05D004585 3.9e-28 129.0 191 48.2
SGA_v2.0_scaffold25G11123 Striga asiatica HOM05D004006 ORTHO05D004585 1.9e-27 126.7 191 43.5
PSO528G0204 Papaver somniferum HOM05D004006 ORTHO05D004585 8.1e-26 121.3 254 37.8
SalBow7G3581 Salvia bowleyana HOM05D004006 ORTHO05D004585 8.1e-26 121.3 191 40.3
Gohir.D05G270600 Gossypium hirsutum HOM05D004006 ORTHO05D004585 2.4e-25 119.8 173 47.4
Gorai.009G283200 Gossypium raimondii HOM05D004006 ORTHO05D004585 5.3e-25 118.6 177 46.9
Hund17292 Selenicereus undatus HOM05D004006 ORTHO05D004585 5.3e-25 118.6 237 38.0
PSO170G2295 Papaver somniferum HOM05D004006 ORTHO05D004585 2.6e-24 116.3 261 36.0
Sopen11g008440 Solanum pennellii HOM05D004006 ORTHO05D004585 3.4e-24 115.9 150 46.7
Lsat_1_v5_gn_5_101481 Lactuca sativa HOM05D004006 ORTHO05D004585 1.6e-21 107.1 194 39.2
Cpa.g.sc64.85 Carica papaya HOM05D004006 ORTHO05D004585 2.1e-21 106.7 123 47.2
HPP92_011945 Vanilla planifolia HOM05D004006 ORTHO05D004585 6.0e-21 105.1 194 36.1
CARHR035970 Cardamine hirsuta HOM05D004006 ORTHO05D004585 1.1e-19 100.9 197 38.1
HanXRQChr04g0125261 Helianthus annuus HOM05D004006 ORTHO05D004585 1.9e-19 100.1 206 36.9
THA.LOC104806821 Tarenaya hassleriana HOM05D004006 ORTHO05D004585 2.5e-19 99.8 191 35.1
CDE06G0283 Ceratophyllum demersum HOM05D004006 ORTHO05D004585 4.3e-19 99.0 173 38.2
CDE08G1629 Ceratophyllum demersum HOM05D004006 ORTHO05D004585 4.3e-19 99.0 173 37.6
Hund26811 Selenicereus undatus HOM05D004006 ORTHO05D004585 4.3e-19 99.0 177 39.0
THA.LOC104817318 Tarenaya hassleriana HOM05D004006 ORTHO05D004585 9.6e-19 97.8 201 34.3
AL1G52380 Arabidopsis lyrata HOM05D004006 ORTHO05D004585 8.1e-18 94.7 196 35.2
Carub.0001s3524 Capsella rubella HOM05D004006 ORTHO05D004585 1.8e-17 93.6 205 34.6
Os04g0690500 Oryza sativa ssp. japonica HOM05D004006 ORTHO05D004585 2.4e-17 93.2 216 35.2
A10p07490 Brassica napus HOM05D004006 ORTHO05D004585 5.3e-17 92.0 173 36.4
BraSC36t46058Z Brassica rapa HOM05D004006 ORTHO05D004585 5.3e-17 92.0 173 36.4
BcaC08g42859 Brassica carinata HOM05D004006 ORTHO05D004585 9.0e-17 91.3 173 36.4
C06p00700 Brassica napus HOM05D004006 ORTHO05D004585 9.0e-17 91.3 173 36.4
BolC6t35208H Brassica oleracea HOM05D004006 ORTHO05D004585 1.2e-16 90.9 173 35.8
Thhalv10011817m.g Eutrema salsugineum HOM05D004006 ORTHO05D004585 9.9e-16 87.8 161 38.5
Sp1g33590 Schrenkiella parvula HOM05D004006 ORTHO05D004585 9.9e-16 87.8 190 34.2
VMungo0647G0089 Vigna mungo HOM05D004006 ORTHO05D004585 2.9e-15 86.3 103 44.7
AUR62014339 Chenopodium quinoa HOM05D004006 ORTHO05D004585 1.4e-14 84.0 140 43.6
Gohir.A05G268750 Gossypium hirsutum HOM05D004006 ORTHO05D004585 1.4e-14 84.0 125 45.6
AT1G44608 Arabidopsis thaliana HOM05D004006 ORTHO05D004585 4.2e-14 82.4 181 33.7
Aa31LG7G5780 Aethionema arabicum HOM05D004006 ORTHO05D004585 7.1e-14 81.6 166 39.2
Sabra02G0065700 Salix brachista HOM05D004006 ORTHO05D004585 1.2e-13 80.9 99 44.4
unitig_46.g18107 Utricularia gibba HOM05D004006 ORTHO05D004585 3.5e-13 79.3 167 35.3
Phvul.008G163001 Phaseolus vulgaris HOM05D004006 ORTHO05D004585 7.9e-13 78.2 78 48.7
Sabra05G0134100 Salix brachista HOM05D004006 ORTHO05D004585 7.9e-13 78.2 96 41.7
HPP92_011964 Vanilla planifolia HOM05D004006 ORTHO05D004585 1.9e-11 73.6 191 30.9
PSO017G3194 Papaver somniferum HOM05D004006 ORTHO05D004585 2.5e-11 73.2 247 30.0
Lj4C625T3 Lonicera japonica HOM05D004006 ORTHO05D004585 4.3e-11 72.4 77 48.1
VMungo0647G1885 Vigna mungo HOM05D004006 ORTHO05D004585 1.3e-10 70.9 89 41.6
Aa31LG6G9320 Aethionema arabicum HOM05D004006 ORTHO05D004585 3.1e-09 66.2 170 34.1
CDE12G0877 Ceratophyllum demersum HOM05D004006 ORTHO05D004585 4.5e-08 62.4 121 35.5


User provided reference genes

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