Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu050896.1 Olea europaea HOM05D003443 ORTHO05D009887 2.1e-296 1021.5 505 100.0
MSTRG.1462 Avicennia marina HOM05D003443 ORTHO05D009887 3.4e-108 396.4 437 49.9
Migut.C01151 Erythranthe guttata HOM05D003443 ORTHO05D009887 4.7e-102 375.9 444 48.4
SalBow7G0745 Salvia bowleyana HOM05D003443 ORTHO05D009887 1.4e-98 364.4 438 48.6
SalBow7G1610 Salvia bowleyana HOM05D003443 ORTHO05D009887 3.0e-96 356.7 432 47.7
RhsimUnG0094800 Rhododendron simsii HOM05D003443 ORTHO05D009887 6.6e-96 355.5 468 43.6
SGA_v2.0_scaffold52G18985 Striga asiatica HOM05D003443 ORTHO05D009887 9.6e-95 351.7 439 45.8
DCAR_003542 Daucus carota HOM05D003443 ORTHO05D009887 1.6e-86 324.3 441 43.5
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 1.5e-84 317.8 441 43.1
Lj7C333G3 Lonicera japonica HOM05D003443 ORTHO05D009887 1.5e-84 317.8 366 50.5
Atru.chr13.1406 Acer truncatum HOM05D003443 ORTHO05D009887 5.8e-84 315.8 463 42.1
Lsat_1_v5_gn_1_8320 Lactuca sativa HOM05D003443 ORTHO05D009887 5.8e-84 315.8 424 42.9
Nitab4.5_0002816g0090 Nicotiana tabacum HOM05D003443 ORTHO05D009887 1.7e-83 314.3 457 43.8
GSVIVG01008903001 Vitis vinifera HOM05D003443 ORTHO05D009887 3.8e-83 313.2 456 43.2
PGSC0003DMG400014817 Solanum tuberosum HOM05D003443 ORTHO05D009887 1.2e-81 308.1 459 42.9
CAN.G48.26 Capsicum annuum HOM05D003443 ORTHO05D009887 1.6e-81 307.8 453 43.0
Manes.02G161000 Manihot esculenta HOM05D003443 ORTHO05D009887 1.0e-80 305.1 458 41.0
Solyc03g093210.3 Solanum lycopersicum HOM05D003443 ORTHO05D009887 1.5e-79 301.2 483 41.4
TAR628G0851 Trochodendron aralioides HOM05D003443 ORTHO05D009887 3.6e-78 296.6 454 41.0
QL09p035320 Quercus lobata HOM05D003443 ORTHO05D009887 1.8e-77 294.3 465 41.9
Thecc.08G121100 Theobroma cacao HOM05D003443 ORTHO05D009887 2.6e-76 290.4 454 40.3
HanXRQChr04g0111631 Helianthus annuus HOM05D003443 ORTHO05D009887 4.5e-76 289.7 424 40.8
Sed0010337 Sechium edule HOM05D003443 ORTHO05D009887 5.8e-76 289.3 428 41.6
TWI56G0082 Tripterygium wilfordii HOM05D003443 ORTHO05D009887 3.8e-75 286.6 447 40.3
Eucgr.F03767 Eucalyptus grandis HOM05D003443 ORTHO05D009887 4.2e-74 283.1 457 40.9
CANSAT25G3703 Cannabis sativa HOM05D003443 ORTHO05D009887 5.5e-74 282.7 450 39.6
Gorai.009G244000 Gossypium raimondii HOM05D003443 ORTHO05D009887 7.1e-74 282.3 458 39.5
Sabra05G0132100 Salix brachista HOM05D003443 ORTHO05D009887 1.2e-73 281.6 465 39.1
MD08G1168100 Malus domestica HOM05D003443 ORTHO05D009887 2.7e-73 280.4 467 40.9
RcHm_v2.0_Chr6g0295331 Rosa chinensis HOM05D003443 ORTHO05D009887 3.0e-72 276.9 465 39.8
Gohir.A05G233300 Gossypium hirsutum HOM05D003443 ORTHO05D009887 3.9e-72 276.6 459 39.4
CsaV3_4G028430 Cucumis sativus L. HOM05D003443 ORTHO05D009887 8.7e-72 275.4 427 39.6
Hund16841 Selenicereus undatus HOM05D003443 ORTHO05D009887 1.1e-71 275.0 460 41.1
Prupe.1G501800 Prunus persica HOM05D003443 ORTHO05D009887 1.9e-71 274.2 464 40.1
ClCG11G015590 Citrullus lanatus HOM05D003443 ORTHO05D009887 2.5e-71 273.9 437 39.8
Nn5g28161 Nelumbo nucifera HOM05D003443 ORTHO05D009887 2.5e-71 273.9 464 38.6
FvH4_2g26511 Fragaria vesca HOM05D003443 ORTHO05D009887 8.1e-70 268.9 461 38.2
Nitab4.5_0010023g0010 Nicotiana tabacum HOM05D003443 ORTHO05D009887 1.8e-69 267.7 538 37.2
MELO3C010459.2 Cucumis melo HOM05D003443 ORTHO05D009887 3.1e-69 266.9 441 39.2
Actinidia25684 Actinidia chinensis HOM05D003443 ORTHO05D009887 2.0e-68 264.2 340 44.1
vmacro00815 Vaccinium macrocarpon HOM05D003443 ORTHO05D009887 2.0e-68 264.2 484 36.0
FAN15G1193 Fragaria x ananassa HOM05D002169 ORTHO05D006927 1.0e-67 261.9 457 37.6
ECA247G0446 Erigeron canadensis HOM05D003443 ORTHO05D009887 2.9e-67 260.4 361 41.6
Lalb_Chr10g0101921 Lupinus albus HOM05D003443 ORTHO05D009887 2.9e-67 260.4 475 36.6
VMungo0647G1328 Vigna mungo HOM05D003443 ORTHO05D009887 3.2e-66 256.9 459 35.7
Psat2g078480 Pisum sativum HOM05D003443 ORTHO05D009887 2.7e-65 253.8 459 35.1
QL09p036517 Quercus lobata HOM05D003443 ORTHO05D009887 6.0e-65 252.7 434 40.3
Lj1g0008620 Lotus japonicus HOM05D003443 ORTHO05D009887 1.3e-64 251.5 458 35.2
arahy.Tifrunner.gnm1.ann1.5F0RSX Arachis hypogaea HOM05D003443 ORTHO05D009887 3.0e-64 250.4 458 36.2
Ca_03725_v3 Cicer arietinum L. HOM05D003443 ORTHO05D009887 7.4e-63 245.7 461 35.8
arahy.Tifrunner.gnm1.ann1.JR3K98 Arachis hypogaea HOM05D003443 ORTHO05D009887 9.6e-63 245.4 458 36.0
Medtr5g059070 Medicago truncatula HOM05D003443 ORTHO05D009887 1.6e-62 244.6 459 35.7
Peaxi162Scf00241g00037 Petunia axillaris HOM05D003443 ORTHO05D009887 1.8e-61 241.1 475 36.0
Phvul.008G165600 Phaseolus vulgaris HOM05D003443 ORTHO05D009887 1.7e-59 234.6 464 34.7
Cc10_g11010 Coffea canephora HOM05D003443 ORTHO05D009887 5.5e-58 229.6 255 48.2
FAN27G2831 Fragaria x ananassa HOM05D003443 ORTHO05D009887 1.9e-55 221.1 423 35.7
Haze_00482 Corylus avellana HOM05D003443 ORTHO05D009887 6.3e-54 216.1 426 35.2
Sopen03g024010 Solanum pennellii HOM05D003443 ORTHO05D009887 1.4e-53 214.9 284 44.7
EL10Ac1g00011 Beta vulgaris HOM05D003443 ORTHO05D009887 2.4e-53 214.2 463 35.4
Duzib093G0763 Durio zibethinus HOM05D003443 ORTHO05D009887 8.5e-51 205.7 255 43.5
TPR.G8502 Trifolium pratense HOM05D003443 ORTHO05D009887 2.5e-50 204.1 423 33.3
AUR62004719 Chenopodium quinoa HOM05D003443 ORTHO05D009887 7.9e-49 199.1 422 34.8
Sc01g0001370 Simmondsia chinensis HOM05D003443 ORTHO05D009887 6.7e-48 196.1 381 36.2
Glyma.14G162900 Glycine max HOM05D003443 ORTHO05D009887 6.3e-46 189.5 400 33.8
AUR62023638 Chenopodium quinoa HOM05D003443 ORTHO05D009887 5.3e-45 186.4 401 33.9
Medtr5g459020 Medicago truncatula HOM05D003443 ORTHO05D009887 4.7e-41 173.3 254 40.9
Actinidia29454 Actinidia chinensis HOM05D003443 ORTHO05D009887 2.0e-39 167.9 203 47.3
Aqoxy5G02443 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 2.1e-33 147.9 290 34.5
Potri.005G174900 Populus trichocarpa HOM05D003443 ORTHO05D009887 1.2e-31 142.1 451 27.1
Gohir.D05G235701 Gossypium hirsutum HOM05D003443 ORTHO05D009887 2.0e-31 141.4 199 41.7
MBI06_g02575_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 1.8e-29 134.8 452 29.0
Lj7E334T0 Lonicera japonica HOM05D003443 ORTHO05D009887 9.1e-29 132.5 86 72.1
Cc10_g11020 Coffea canephora HOM05D003443 ORTHO05D009887 1.2e-28 132.1 92 67.4
ATR0684G011 Amborella trichopoda HOM05D003443 ORTHO05D009887 3.2e-26 124.0 287 30.3
Os04g0450500 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D009887 6.8e-24 116.3 240 32.1
MBI06_g35594_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 1.1e-21 109.0 244 36.5
PGSC0003DMG400021471 Solanum tuberosum HOM05D003443 ORTHO05D009887 1.1e-21 109.0 85 62.4
MBI06_g44274_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 2.7e-20 104.4 107 52.3
COL.COLO4_12190 Corchorus olitorius HOM05D003443 ORTHO05D009887 5.0e-19 100.1 77 57.1
Aqoxy5G02442 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 3.8e-11 73.9 149 36.2
Oeu013628.1 Olea europaea HOM05D003443 ORTHO05D009887 2.1e-09 68.2 49 61.2
SEGI_24688 Sequoiadendron giganteum HOM05D003443 ORTHO05D009887 3.6e-09 67.4 64 50.0
Hma1.2p1_0248F.1_g102080 Hydrangea macrophylla HOM05D003443 ORTHO05D009887 6.1e-09 66.6 36 80.6
Migut.K01194 Erythranthe guttata HOM05D003443 ORTHO05D009887 1.0e-08 65.9 50 56.0
Oeu058484.1 Olea europaea HOM05D004088 ORTHO05D004736 5.7e-07 60.1 49 59.2
MBI06_g35595_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 1.7e-06 58.5 121 30.6


User provided reference genes

Program Settings