Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu050809.4 Olea europaea HOM05D005409 ORTHO05D006456 0.0e+00 1258.0 629 100.0
Oeu016146.1 Olea europaea HOM05D005409 ORTHO05D006456 2.9e-250 868.6 659 70.6
Cc02_g11840 Coffea canephora HOM05D005409 ORTHO05D006456 2.1e-160 570.1 669 50.4
Nitab4.5_0000503g0080 Nicotiana tabacum HOM05D005409 ORTHO05D006456 7.3e-153 545.0 668 49.3
Nitab4.5_0006456g0010 Nicotiana tabacum HOM05D005409 ORTHO05D006456 1.8e-151 540.4 666 48.6
Solyc02g079880.3 Solanum lycopersicum HOM05D005409 ORTHO05D006456 1.8e-151 540.4 663 48.9
Sopen02g024640 Solanum pennellii HOM05D005409 ORTHO05D006456 7.6e-150 535.0 666 48.8
Dinv18952 Davidia involucrata HOM05D005409 ORTHO05D006456 1.3e-149 534.3 681 48.6
PGSC0003DMG400021722 Solanum tuberosum HOM05D005409 ORTHO05D006456 3.8e-149 532.7 664 48.2
MSTRG.15953 Avicennia marina HOM05D005409 ORTHO05D006456 7.9e-147 525.0 666 48.2
Peaxi162Scf00759g00211 Petunia axillaris HOM05D005409 ORTHO05D006456 8.1e-144 515.0 666 47.4
TAR624G1144 Trochodendron aralioides HOM05D005409 ORTHO05D006456 3.9e-138 496.1 661 46.9
Actinidia11830 Actinidia chinensis HOM05D005409 ORTHO05D006456 6.9e-127 458.8 670 44.3
Migut.M01258 Erythranthe guttata HOM05D005409 ORTHO05D006456 1.2e-126 458.0 654 46.6
Lj2A276T57 Lonicera japonica HOM05D005409 ORTHO05D006456 1.0e-125 454.9 664 44.7
Cfa016400 Carpinus fangiana HOM05D005409 ORTHO05D006456 1.7e-125 454.1 651 45.6
Nn1g06923 Nelumbo nucifera HOM05D005409 ORTHO05D006456 6.5e-125 452.2 662 46.5
Hma1.2p1_0809F.1_g221770 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 4.2e-124 449.5 674 44.4
Manes.17G030300 Manihot esculenta HOM05D005409 ORTHO05D006456 2.5e-121 440.3 655 43.4
QL05p077347 Quercus lobata HOM05D005409 ORTHO05D006456 4.3e-121 439.5 673 42.3
Prupe.4G030000 Prunus persica HOM05D005409 ORTHO05D006456 9.7e-121 438.3 655 42.3
TAR626G0140 Trochodendron aralioides HOM05D005409 ORTHO05D006456 6.3e-120 435.6 660 44.1
Ciclev10014614m.g Citrus clementina HOM05D005409 ORTHO05D006456 8.2e-120 435.3 653 42.6
Rhsim02G0115600 Rhododendron simsii HOM05D005409 ORTHO05D006456 1.5e-118 431.0 702 42.7
Lj1A1221T57 Lonicera japonica HOM05D005409 ORTHO05D006456 1.9e-116 424.1 649 42.7
MD05G1335400 Malus domestica HOM05D005409 ORTHO05D006456 1.9e-116 424.1 653 42.0
Duzib192G0995 Durio zibethinus HOM05D005409 ORTHO05D006456 1.2e-115 421.4 661 43.6
Duzib235G0390 Durio zibethinus HOM05D005409 ORTHO05D006456 1.6e-115 421.0 660 43.2
CiPaw.10G113200 Carya illinoinensis HOM05D005409 ORTHO05D006456 8.8e-114 415.2 656 43.1
ECA236G3644 Erigeron canadensis HOM05D005409 ORTHO05D006456 7.4e-113 412.1 658 42.6
MD10G1310800 Malus domestica HOM05D005409 ORTHO05D006456 8.2e-112 408.7 660 41.4
Thecc.06G207400 Theobroma cacao HOM05D005409 ORTHO05D006456 1.8e-111 407.5 658 42.2
CANSAT35G0463 Cannabis sativa HOM05D005409 ORTHO05D006456 2.4e-111 407.1 666 41.9
COL.COLO4_33645 Corchorus olitorius HOM05D005409 ORTHO05D006456 4.1e-111 406.4 659 42.8
FAN25G1204 Fragaria x ananassa HOM05D005409 ORTHO05D006456 9.1e-111 405.2 690 39.6
Gohir.D09G070300 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.2e-110 404.8 660 41.4
Gohir.A09G070200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.3e-109 401.4 660 41.4
Gorai.006G084700 Gossypium raimondii HOM05D005409 ORTHO05D006456 1.3e-109 401.4 667 41.1
Gohir.A10G017200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 8.5e-109 398.7 657 41.2
Sc17g0006920 Simmondsia chinensis HOM05D005409 ORTHO05D006456 1.4e-108 397.9 649 40.8
Lj4g0002185 Lotus japonicus HOM05D005409 ORTHO05D006456 5.5e-108 396.0 664 40.4
Glyma.08G061800 Glycine max HOM05D005409 ORTHO05D006456 7.2e-108 395.6 661 40.4
Phvul.002G218900 Phaseolus vulgaris HOM05D005409 ORTHO05D006456 1.2e-107 394.8 663 40.9
DCAR_008109 Daucus carota HOM05D005409 ORTHO05D006456 1.6e-107 394.4 635 43.1
Gohir.D10G017400 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.6e-107 394.4 658 41.3
Gorai.011G019300 Gossypium raimondii HOM05D005409 ORTHO05D006456 1.6e-107 394.4 658 41.3
Hma1.2p1_0809F.1_g221760 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 4.7e-107 392.9 569 44.3
Glyma.07G187300 Glycine max HOM05D005409 ORTHO05D006456 1.0e-106 391.7 660 39.5
CiPaw.10G113100 Carya illinoinensis HOM05D005409 ORTHO05D006456 5.2e-106 389.4 658 41.0
VMungo0251G1750 Vigna mungo HOM05D005409 ORTHO05D006456 1.7e-104 384.4 670 39.7
SalBow8G4343 Salvia bowleyana HOM05D005409 ORTHO05D006456 4.8e-104 382.9 458 49.1
Oeu050499.1 Olea europaea HOM05D005409 ORTHO05D006456 6.3e-104 382.5 411 53.0
AUR62012574 Chenopodium quinoa HOM05D005409 ORTHO05D006456 1.1e-103 381.7 663 41.9
GSVIVG01006401001 Vitis vinifera HOM05D005409 ORTHO05D006456 1.7e-101 374.4 658 39.1
Hund23539 Selenicereus undatus HOM05D005409 ORTHO05D006456 2.9e-101 373.6 663 38.5
ClCG03G005190 Citrullus lanatus HOM05D005409 ORTHO05D006456 3.8e-101 373.2 644 40.4
Aqoxy1G03830 Aquilegia oxysepala HOM05D005409 ORTHO05D006456 5.0e-101 372.9 696 39.4
Ca_18454_v3 Cicer arietinum L. HOM05D005409 ORTHO05D006456 5.0e-101 372.9 659 40.2
vmacro15844 Vaccinium macrocarpon HOM05D005409 ORTHO05D006456 1.9e-100 370.9 662 40.8
SGA_v2.0_scaffold7G03896 Striga asiatica HOM05D005409 ORTHO05D006456 5.5e-100 369.4 668 40.3
AUR62014626 Chenopodium quinoa HOM05D005409 ORTHO05D006456 7.2e-100 369.0 663 41.3
TWI63G1109 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 2.7e-99 367.1 668 39.1
CsaV3_1G011380 Cucumis sativus L. HOM05D005409 ORTHO05D006456 3.0e-98 363.6 657 40.3
Eucgr.E03596 Eucalyptus grandis HOM05D005409 ORTHO05D006456 6.7e-98 362.5 575 42.1
MELO3C002515.2 Cucumis melo HOM05D005409 ORTHO05D006456 8.8e-98 362.1 657 40.2
EL10As6g23684 Beta vulgaris HOM05D005409 ORTHO05D006456 1.5e-97 361.3 669 38.7
Lalb_Chr09g0327161 Lupinus albus HOM05D005409 ORTHO05D006456 3.3e-97 360.1 659 39.5
DCAR_004174 Daucus carota HOM05D005409 ORTHO05D006456 1.7e-96 357.8 636 40.1
HanXRQChr15g0482781 Helianthus annuus HOM05D005409 ORTHO05D006456 7.7e-94 349.0 678 38.3
Sed0006411 Sechium edule HOM05D005409 ORTHO05D006456 1.0e-93 348.6 655 39.2
PSO675G2591 Papaver somniferum HOM05D005409 ORTHO05D006456 2.2e-93 347.4 662 40.0
Potri.011G031900 Populus trichocarpa HOM05D005409 ORTHO05D006456 2.2e-93 347.4 649 39.3
PSO541G2946 Papaver somniferum HOM05D005409 ORTHO05D006456 2.9e-93 347.1 662 39.9
HanXRQChr15g0482771 Helianthus annuus HOM05D005409 ORTHO05D006456 8.5e-93 345.5 679 38.1
Lalb_Chr16g0383301 Lupinus albus HOM05D005409 ORTHO05D006456 4.2e-92 343.2 656 37.7
Ah.14g088510 Amaranthus hybridus HOM05D005409 ORTHO05D006456 9.4e-92 342.0 675 37.6
Sabra11G0025100 Salix brachista HOM05D005409 ORTHO05D006456 9.4e-92 342.0 649 39.4
Psat0s935g0040 Pisum sativum HOM05D005409 ORTHO05D006456 2.1e-91 340.9 661 38.9
Lsat_1_v5_gn_7_18380 Lactuca sativa HOM05D005409 ORTHO05D006456 8.8e-90 335.5 647 39.1
CSS0017238 Camellia sinensis var. sinensis HOM05D005409 ORTHO05D006456 2.2e-88 330.9 647 39.3
MBI02_g26225_MAGBIO Magnolia biondii HOM05D005409 ORTHO05D006456 6.3e-88 329.3 652 38.8
Haze_06671 Corylus avellana HOM05D005409 ORTHO05D006456 1.8e-87 327.8 432 46.5
Medtr4g092050 Medicago truncatula HOM05D005409 ORTHO05D006456 4.5e-86 323.2 648 36.6
GSVIVG01030650001 Vitis vinifera HOM05D005409 ORTHO05D006456 2.3e-85 320.9 654 37.6
PGR042G2399 Punica granatum HOM05D005409 ORTHO05D006456 6.5e-85 319.3 654 37.0
Actinidia24044 Actinidia chinensis HOM05D005409 ORTHO05D006456 1.5e-84 318.2 494 40.9
Sabra11G0019200 Salix brachista HOM05D005409 ORTHO05D006456 2.8e-83 313.9 638 38.4
Actinidia26760 Actinidia chinensis HOM05D005409 ORTHO05D006456 3.6e-83 313.5 478 42.5
TPR.G13934 Trifolium pratense HOM05D005409 ORTHO05D006456 4.7e-83 313.2 663 37.3
Cpa.g.sc81.2 Carica papaya HOM05D005409 ORTHO05D006456 4.4e-81 306.6 436 44.3
FvH4_3g03030 Fragaria vesca HOM05D005409 ORTHO05D006456 4.4e-81 306.6 519 38.9
Sabra17G0028000 Salix brachista HOM05D005409 ORTHO05D006456 1.6e-75 288.1 688 34.7
AT1G11480 Arabidopsis thaliana HOM05D005409 ORTHO05D006456 6.1e-75 286.2 639 36.8
TWI38G0167 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 6.1e-75 286.2 611 36.3
Actinidia26959 Actinidia chinensis HOM05D005409 ORTHO05D006456 5.2e-74 283.1 511 41.1
CDE01G0308 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 8.9e-74 282.3 645 34.9
Potri.007G119200 Populus trichocarpa HOM05D005409 ORTHO05D006456 4.4e-73 280.0 670 34.8
THA.LOC104818924 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 4.4e-73 280.0 626 37.4
arahy.Tifrunner.gnm1.ann1.QZ9QK3 Arachis hypogaea HOM05D005409 ORTHO05D006456 1.3e-72 278.5 653 37.1
Potri.017G041300 Populus trichocarpa HOM05D005409 ORTHO05D006456 1.7e-72 278.1 642 35.7
Sp1g10100 Schrenkiella parvula HOM05D005409 ORTHO05D006456 6.4e-72 276.2 644 35.7
THA.LOC104809524 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 5.4e-71 273.1 651 36.3
Aa31LG1G3270 Aethionema arabicum HOM05D005409 ORTHO05D006456 6.6e-69 266.2 623 35.2
HPP92_000870 Vanilla planifolia HOM05D005409 ORTHO05D006456 8.6e-69 265.8 663 35.3
A06p08100 Brassica napus HOM05D005409 ORTHO05D006456 2.5e-68 264.2 641 35.3
CDE12G0800 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 2.5e-68 264.2 549 37.7
arahy.Tifrunner.gnm1.ann1.XK38U2 Arachis hypogaea HOM05D005409 ORTHO05D006456 3.3e-68 263.8 644 36.3
AL1G22590 Arabidopsis lyrata HOM05D005409 ORTHO05D006456 5.6e-68 263.1 639 36.0
Thhalv10007161m.g Eutrema salsugineum HOM05D005409 ORTHO05D006456 1.2e-67 261.9 644 35.6
CARHR011750 Cardamine hirsuta HOM05D005409 ORTHO05D006456 8.0e-67 259.2 654 34.4
Sabra07G0096100 Salix brachista HOM05D005409 ORTHO05D006456 3.1e-66 257.3 751 33.0
C05p09680 Brassica napus HOM05D005409 ORTHO05D006456 4.0e-66 256.9 642 35.0
Carub.0001s1109 Capsella rubella HOM05D005409 ORTHO05D006456 8.9e-66 255.8 645 34.0
BolC5t29709H Brassica oleracea HOM05D005409 ORTHO05D006456 3.4e-65 253.8 611 35.4
RcHm_v2.0_Chr5g0004681 Rosa chinensis HOM05D005409 ORTHO05D006456 5.8e-65 253.1 506 37.0
BraA06t24009Z Brassica rapa HOM05D005409 ORTHO05D006456 7.5e-65 252.7 639 34.9
BcaC05g25024 Brassica carinata HOM05D005409 ORTHO05D006456 9.8e-65 252.3 642 34.6
BcaNung07116 Brassica carinata HOM05D005409 ORTHO05D006456 2.0e-57 228.0 418 39.2
Os07g0546100 Oryza sativa ssp. japonica HOM05D005409 ORTHO05D006456 1.5e-52 211.8 647 32.3
Atru.chr10.2048 Acer truncatum HOM05D005409 ORTHO05D006456 3.8e-48 197.2 382 37.4
Atru.chr6.3116 Acer truncatum HOM05D005409 ORTHO05D006456 3.9e-45 187.2 450 35.8
Ah.09g237100 Amaranthus hybridus HOM05D000067 ORTHO05D006456 2.8e-43 181.0 635 28.7
Zm00001eb323520 Zea mays HOM05D005409 ORTHO05D006456 3.1e-42 177.6 656 30.8
GSVIVG01006635001 Vitis vinifera HOM05D005409 ORTHO05D006456 9.9e-41 172.6 157 57.3
ATR0804G077 Amborella trichopoda HOM05D005409 ORTHO05D006456 1.3e-37 162.2 733 30.3
RcHm_v2.0_Chr5g0004671 Rosa chinensis HOM05D005409 ORTHO05D006456 2.4e-34 151.4 122 63.1
Atru.chr10.2047 Acer truncatum HOM05D005409 ORTHO05D006456 6.9e-34 149.8 230 45.7
Cpa.g.sc81.1 Carica papaya HOM05D005409 ORTHO05D006456 2.4e-26 124.8 184 41.8
Zm00001eb106500 Zea mays HOM05D005409 ORTHO05D006456 6.4e-24 116.7 404 31.9
SMO118G0050 Selaginella moellendorffii HOM05D005409 ORTHO05D006456 1.5e-20 105.5 740 25.1
Atru.chr6.3115 Acer truncatum HOM05D005409 ORTHO05D006456 1.0e-16 92.8 174 37.9
AagrBONN_evm.TU.Sc2ySwM_228.455 Anthoceros agrestis HOM05D005409 ORTHO05D006456 7.1e-15 86.7 115 47.8
Mapoly0113s0049 Marchantia polymorpha HOM05D005409 ORTHO05D006456 7.1e-15 86.7 334 28.4
Pp3c20_3440 Physcomitrium patens HOM05D005409 ORTHO05D006456 1.2e-14 85.9 179 38.0
CBR_g36658 Chara braunii HOM05D005409 ORTHO05D006456 9.7e-12 76.3 110 43.6
Haze_06667 Corylus avellana HOM05D005409 ORTHO05D006456 6.3e-11 73.6 176 31.8
CAN.G466.8 Capsicum annuum HOM05D005409 ORTHO05D006456 9.0e-10 69.7 130 35.4
QL05p012359 Quercus lobata HOM05D005409 ORTHO05D006456 5.0e-08 63.9 101 39.6
Actinidia26960 Actinidia chinensis HOM05D005409 ORTHO05D006456 3.6e-06 57.8 79 50.6
SEGI_29006 Sequoiadendron giganteum HOM05D005409 ORTHO05D006456 6.1e-06 57.0 234 26.1


User provided reference genes

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