Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu050758.1 Olea europaea HOM05D007434 ORTHO05D009541 2.3e-47 191.8 90 100.0
Manes.13G126300 Manihot esculenta HOM05D007434 ORTHO05D009541 1.7e-15 85.9 85 47.1
COL.COLO4_11385 Corchorus olitorius HOM05D007434 ORTHO05D009541 3.3e-14 81.6 91 42.9
FAN26G1295 Fragaria x ananassa HOM05D007434 ORTHO05D019139 1.6e-13 79.3 89 43.8
Thecc.01G053200 Theobroma cacao HOM05D007434 ORTHO05D009541 1.6e-13 79.3 88 46.6
Ciclev10027212m.g Citrus clementina HOM05D007434 ORTHO05D009541 1.1e-12 76.6 91 47.3
FAN28G0171 Fragaria x ananassa HOM05D007434 ORTHO05D009541 1.1e-12 76.6 89 43.8
Sc03g0001440 Simmondsia chinensis HOM05D012520 ORTHO05D013638 1.8e-12 75.9 90 43.3
Potri.007G041400 Populus trichocarpa HOM05D007434 ORTHO05D009541 5.3e-12 74.3 92 42.4
Atru.chr3.395 Acer truncatum HOM05D007434 ORTHO05D013638 9.0e-12 73.6 94 42.6
Sed0004872 Sechium edule HOM05D007434 ORTHO05D009541 9.0e-12 73.6 95 45.3
Manes.12G100300 Manihot esculenta HOM05D007434 ORTHO05D009541 2.0e-11 72.4 84 45.2
FvH4_1g15720 Fragaria vesca HOM05D007434 ORTHO05D009541 2.6e-11 72.0 82 45.1
FAN19G1812 Fragaria x ananassa HOM05D007434 ORTHO05D019139 2.6e-11 72.0 82 45.1
Lj4g0023681 Lotus japonicus HOM05D007434 ORTHO05D009541 7.6e-11 70.5 96 40.6
QL06p042177 Quercus lobata HOM05D007434 ORTHO05D009541 7.6e-11 70.5 82 42.7
Glyma.17G176500 Glycine max HOM05D007434 ORTHO05D009541 1.7e-10 69.3 79 44.3
Glyma.05G083900 Glycine max HOM05D007434 ORTHO05D009541 2.2e-10 68.9 79 44.3
TPR.G19007 Trifolium pratense HOM05D007434 ORTHO05D009541 2.9e-10 68.6 83 43.4
QL06p042201 Quercus lobata HOM05D007434 ORTHO05D009541 4.9e-10 67.8 81 44.4
CiPaw.01G021300 Carya illinoinensis HOM05D007434 ORTHO05D009541 6.4e-10 67.4 83 45.8
Lalb_Chr05g0213221 Lupinus albus HOM05D007434 ORTHO05D009541 1.4e-09 66.2 86 41.9
Gohir.A11G190600 Gossypium hirsutum HOM05D007434 ORTHO05D009541 1.9e-09 65.9 88 39.8
Lsat_1_v5_gn_4_167700 Lactuca sativa HOM05D007434 ORTHO05D009541 1.9e-09 65.9 78 47.4
Rhsim08G0102100 Rhododendron simsii HOM05D007434 ORTHO05D009541 2.4e-09 65.5 103 40.8
CiPaw.02G009300 Carya illinoinensis HOM05D007434 ORTHO05D009541 3.2e-09 65.1 91 39.6
ClCG01G016720 Citrullus lanatus HOM05D007434 ORTHO05D009541 5.4e-09 64.3 81 43.2
Oeu049318.1 Olea europaea HOM05D007434 ORTHO05D009541 5.4e-09 64.3 66 53.0
Phvul.003G245601 Phaseolus vulgaris HOM05D007434 ORTHO05D009541 5.4e-09 64.3 80 42.5
Cpa.g.sc55.177 Carica papaya HOM05D007434 ORTHO05D009541 7.1e-09 63.9 109 33.9
DCAR_025721 Daucus carota HOM05D007434 ORTHO05D009541 7.1e-09 63.9 85 40.0
Sed0002185 Sechium edule HOM05D007434 ORTHO05D009541 9.3e-09 63.5 97 38.1
Gorai.007G211200 Gossypium raimondii HOM05D007434 ORTHO05D009541 1.2e-08 63.2 88 38.6
Gohir.D11G197400 Gossypium hirsutum HOM05D007434 ORTHO05D009541 2.1e-08 62.4 88 37.5
Glyma.01G184800 Glycine max HOM05D007434 ORTHO05D009541 2.7e-08 62.0 91 42.9
Lalb_Chr16g0378251 Lupinus albus HOM05D007434 ORTHO05D009541 4.6e-08 61.2 108 36.1
Lalb_Chr16g0378431 Lupinus albus HOM05D007434 ORTHO05D009541 4.6e-08 61.2 108 36.1
Lj2g0001941 Lotus japonicus HOM05D007434 ORTHO05D009541 7.8e-08 60.5 91 39.6
Sabra07G0037000 Salix brachista HOM05D014707 ORTHO05D009541 1.0e-07 60.1 80 38.8
CANSAT01G1652 Cannabis sativa HOM05D007434 ORTHO05D009541 1.7e-07 59.3 100 45.0
CARHR280850 Cardamine hirsuta HOM05D012520 ORTHO05D013638 2.3e-07 58.9 94 45.7
Glyma.11G057400 Glycine max HOM05D007434 ORTHO05D009541 2.3e-07 58.9 90 42.2
CsaV3_6G043140 Cucumis sativus L. HOM05D007434 ORTHO05D009541 5.1e-07 57.8 94 39.4
Nn1g05850 Nelumbo nucifera HOM05D007434 ORTHO05D009541 8.7e-07 57.0 94 41.5
Nn1g05851 Nelumbo nucifera HOM05D007434 ORTHO05D009541 1.1e-06 56.6 101 36.6
Aqoxy6G01382 Aquilegia oxysepala HOM05D007434 ORTHO05D009541 1.9e-06 55.8 89 36.0
Ah.03g144580 Amaranthus hybridus HOM05D007434 ORTHO05D060011 3.3e-06 55.1 104 37.5
Aqoxy6G01380 Aquilegia oxysepala HOM05D007434 ORTHO05D009541 3.3e-06 55.1 86 40.7
Prupe.7G136000 Prunus persica HOM05D007434 ORTHO05D009541 3.3e-06 55.1 80 37.5
Prupe.7G136100 Prunus persica HOM05D007434 ORTHO05D013638 3.3e-06 55.1 94 35.1
A07p17070 Brassica napus HOM05D012520 ORTHO05D013638 9.6e-06 53.5 94 40.4
BraA07t29434Z Brassica rapa HOM05D012520 ORTHO05D013638 9.6e-06 53.5 94 40.4


User provided reference genes

Program Settings