Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu050499.1 Olea europaea HOM05D005409 ORTHO05D006456 9.6e-231 803.1 404 100.0
Oeu016146.1 Olea europaea HOM05D005409 ORTHO05D006456 1.8e-112 410.2 450 51.3
Oeu050809.4 Olea europaea HOM05D005409 ORTHO05D006456 1.8e-104 383.6 411 53.0
PGSC0003DMG400021722 Solanum tuberosum HOM05D005409 ORTHO05D006456 3.1e-104 382.9 440 50.2
Solyc02g079880.3 Solanum lycopersicum HOM05D005409 ORTHO05D006456 5.3e-104 382.1 441 49.4
Sopen02g024640 Solanum pennellii HOM05D005409 ORTHO05D006456 9.0e-104 381.3 441 49.4
Nitab4.5_0000503g0080 Nicotiana tabacum HOM05D005409 ORTHO05D006456 2.9e-102 376.3 447 50.3
Nitab4.5_0006456g0010 Nicotiana tabacum HOM05D005409 ORTHO05D006456 1.4e-101 374.0 445 49.2
SalBow8G4343 Salvia bowleyana HOM05D005409 ORTHO05D006456 1.0e-99 367.9 448 49.6
Dinv18952 Davidia involucrata HOM05D005409 ORTHO05D006456 7.4e-98 361.7 465 48.2
Peaxi162Scf00759g00211 Petunia axillaris HOM05D005409 ORTHO05D006456 6.3e-97 358.6 445 48.8
Cc02_g11840 Coffea canephora HOM05D005409 ORTHO05D006456 9.0e-96 354.8 451 47.2
MSTRG.15953 Avicennia marina HOM05D005409 ORTHO05D006456 2.7e-92 343.2 450 46.7
TAR624G1144 Trochodendron aralioides HOM05D005409 ORTHO05D006456 6.5e-86 322.0 442 45.5
Actinidia11830 Actinidia chinensis HOM05D005409 ORTHO05D006456 1.8e-83 313.9 456 45.4
Migut.M01258 Erythranthe guttata HOM05D005409 ORTHO05D006456 6.7e-83 312.0 436 47.0
Haze_06671 Corylus avellana HOM05D005409 ORTHO05D006456 4.4e-82 309.3 429 44.8
Cfa016400 Carpinus fangiana HOM05D005409 ORTHO05D006456 6.9e-80 302.0 435 45.5
Hma1.2p1_0809F.1_g221760 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 6.9e-80 302.0 457 44.9
Hma1.2p1_0809F.1_g221770 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 6.9e-80 302.0 457 44.9
Manes.17G030300 Manihot esculenta HOM05D005409 ORTHO05D006456 3.4e-79 299.7 434 44.7
CiPaw.10G113100 Carya illinoinensis HOM05D005409 ORTHO05D006456 3.8e-78 296.2 438 45.0
Nn1g06923 Nelumbo nucifera HOM05D005409 ORTHO05D006456 6.5e-78 295.4 439 45.6
Duzib235G0390 Durio zibethinus HOM05D005409 ORTHO05D006456 8.5e-78 295.0 439 44.2
QL05p077347 Quercus lobata HOM05D005409 ORTHO05D006456 8.5e-78 295.0 429 46.2
Duzib192G0995 Durio zibethinus HOM05D005409 ORTHO05D006456 1.4e-77 294.3 444 44.1
COL.COLO4_33645 Corchorus olitorius HOM05D005409 ORTHO05D006456 1.2e-76 291.2 439 45.1
Gorai.006G084700 Gossypium raimondii HOM05D005409 ORTHO05D006456 1.6e-76 290.8 446 44.2
Prupe.4G030000 Prunus persica HOM05D005409 ORTHO05D006456 1.6e-76 290.8 438 42.2
Thecc.06G207400 Theobroma cacao HOM05D005409 ORTHO05D006456 2.1e-76 290.4 438 43.6
Lj2A276T57 Lonicera japonica HOM05D005409 ORTHO05D006456 4.7e-76 289.3 444 44.6
Gohir.D09G070300 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.8e-75 287.3 446 43.9
MD05G1335400 Malus domestica HOM05D005409 ORTHO05D006456 3.0e-75 286.6 437 42.1
CiPaw.10G113200 Carya illinoinensis HOM05D005409 ORTHO05D006456 5.2e-75 285.8 432 44.4
CSS0017238 Camellia sinensis var. sinensis HOM05D005409 ORTHO05D006456 6.7e-75 285.4 427 44.0
Cpa.g.sc81.2 Carica papaya HOM05D005409 ORTHO05D006456 1.1e-74 284.6 440 43.0
Rhsim02G0115600 Rhododendron simsii HOM05D005409 ORTHO05D006456 4.4e-74 282.7 474 40.7
ECA236G3644 Erigeron canadensis HOM05D005409 ORTHO05D006456 2.2e-73 280.4 438 43.4
TAR626G0140 Trochodendron aralioides HOM05D005409 ORTHO05D006456 2.2e-73 280.4 442 43.0
DCAR_008109 Daucus carota HOM05D005409 ORTHO05D006456 4.8e-73 279.3 412 43.2
Gohir.A09G070200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 6.3e-73 278.9 442 43.2
CANSAT35G0463 Cannabis sativa HOM05D005409 ORTHO05D006456 3.1e-72 276.6 429 42.7
Ciclev10014614m.g Citrus clementina HOM05D005409 ORTHO05D006456 3.1e-72 276.6 433 42.3
TWI63G1109 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 4.1e-72 276.2 441 42.6
Gohir.D10G017400 Gossypium hirsutum HOM05D005409 ORTHO05D006456 5.3e-72 275.8 440 42.7
Gorai.011G019300 Gossypium raimondii HOM05D005409 ORTHO05D006456 5.3e-72 275.8 440 42.7
SGA_v2.0_scaffold7G03896 Striga asiatica HOM05D005409 ORTHO05D006456 5.3e-72 275.8 427 43.1
Gohir.A10G017200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.6e-71 274.2 439 42.8
Lj1A1221T57 Lonicera japonica HOM05D005409 ORTHO05D006456 1.6e-71 274.2 421 43.5
MD10G1310800 Malus domestica HOM05D005409 ORTHO05D006456 1.9e-69 267.3 442 40.5
Phvul.002G218900 Phaseolus vulgaris HOM05D005409 ORTHO05D006456 7.2e-69 265.4 436 41.1
Lj4g0002185 Lotus japonicus HOM05D005409 ORTHO05D006456 9.4e-69 265.0 442 41.2
ClCG03G005190 Citrullus lanatus HOM05D005409 ORTHO05D006456 1.2e-68 264.6 428 42.5
MELO3C002515.2 Cucumis melo HOM05D005409 ORTHO05D006456 2.1e-68 263.8 440 42.3
CsaV3_1G011380 Cucumis sativus L. HOM05D005409 ORTHO05D006456 3.0e-67 260.0 439 41.9
Glyma.07G187300 Glycine max HOM05D005409 ORTHO05D006456 3.0e-67 260.0 440 41.1
VMungo0251G1750 Vigna mungo HOM05D005409 ORTHO05D006456 3.0e-67 260.0 445 40.2
Eucgr.E03596 Eucalyptus grandis HOM05D005409 ORTHO05D006456 6.7e-67 258.8 424 40.8
Glyma.08G061800 Glycine max HOM05D005409 ORTHO05D006456 3.3e-66 256.5 440 40.5
DCAR_004174 Daucus carota HOM05D005409 ORTHO05D006456 4.4e-66 256.1 416 40.9
Psat0s935g0040 Pisum sativum HOM05D005409 ORTHO05D006456 4.4e-66 256.1 437 41.6
HanXRQChr15g0482781 Helianthus annuus HOM05D005409 ORTHO05D006456 9.7e-66 255.0 449 40.5
Sc17g0006920 Simmondsia chinensis HOM05D005409 ORTHO05D006456 6.3e-65 252.3 434 40.6
FAN25G1204 Fragaria x ananassa HOM05D005409 ORTHO05D006456 7.0e-64 248.8 457 38.5
HanXRQChr15g0482771 Helianthus annuus HOM05D005409 ORTHO05D006456 1.6e-63 247.7 449 40.1
Ca_18454_v3 Cicer arietinum L. HOM05D005409 ORTHO05D006456 2.0e-63 247.3 433 40.6
Hund23539 Selenicereus undatus HOM05D005409 ORTHO05D006456 2.7e-63 246.9 445 40.7
Lsat_1_v5_gn_7_18380 Lactuca sativa HOM05D005409 ORTHO05D006456 3.5e-63 246.5 426 39.4
Sed0006411 Sechium edule HOM05D005409 ORTHO05D006456 2.2e-62 243.8 439 39.2
Potri.011G031900 Populus trichocarpa HOM05D005409 ORTHO05D006456 5.0e-62 242.7 431 38.5
Lalb_Chr09g0327161 Lupinus albus HOM05D005409 ORTHO05D006456 8.5e-62 241.9 433 39.0
EL10As6g23684 Beta vulgaris HOM05D005409 ORTHO05D006456 6.1e-60 235.7 442 38.9
FvH4_3g03030 Fragaria vesca HOM05D005409 ORTHO05D006456 8.0e-60 235.3 456 37.7
Actinidia26959 Actinidia chinensis HOM05D005409 ORTHO05D006456 1.0e-59 235.0 462 38.3
Medtr4g092050 Medicago truncatula HOM05D005409 ORTHO05D006456 1.8e-59 234.2 428 40.4
TPR.G13934 Trifolium pratense HOM05D005409 ORTHO05D006456 5.2e-59 232.6 430 39.5
Sabra11G0025100 Salix brachista HOM05D005409 ORTHO05D006456 4.4e-58 229.6 431 36.9
CDE12G0800 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 9.8e-58 228.4 438 37.4
Lalb_Chr16g0383301 Lupinus albus HOM05D005409 ORTHO05D006456 9.8e-58 228.4 361 42.7
vmacro15844 Vaccinium macrocarpon HOM05D005409 ORTHO05D006456 9.8e-58 228.4 442 38.7
AUR62012574 Chenopodium quinoa HOM05D005409 ORTHO05D006456 3.7e-57 226.5 441 39.9
AUR62014626 Chenopodium quinoa HOM05D005409 ORTHO05D006456 6.3e-57 225.7 438 39.3
Ah.14g088510 Amaranthus hybridus HOM05D005409 ORTHO05D006456 1.1e-56 224.9 447 38.9
Sabra11G0019200 Salix brachista HOM05D005409 ORTHO05D006456 2.4e-56 223.8 416 37.3
Aqoxy1G03830 Aquilegia oxysepala HOM05D005409 ORTHO05D006456 2.0e-55 220.7 476 37.2
AT1G11480 Arabidopsis thaliana HOM05D005409 ORTHO05D006456 3.5e-55 219.9 410 38.0
PGR042G2399 Punica granatum HOM05D005409 ORTHO05D006456 7.7e-55 218.8 364 43.1
PSO541G2946 Papaver somniferum HOM05D005409 ORTHO05D006456 6.6e-54 215.7 451 39.2
PSO675G2591 Papaver somniferum HOM05D005409 ORTHO05D006456 8.6e-54 215.3 451 39.2
GSVIVG01030650001 Vitis vinifera HOM05D005409 ORTHO05D006456 8.6e-54 215.3 442 38.2
MBI02_g26225_MAGBIO Magnolia biondii HOM05D005409 ORTHO05D006456 1.9e-53 214.2 429 38.2
CDE01G0308 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 1.0e-51 208.4 414 36.7
BcaNung07116 Brassica carinata HOM05D005409 ORTHO05D006456 1.8e-51 207.6 410 37.3
Sp1g10100 Schrenkiella parvula HOM05D005409 ORTHO05D006456 2.3e-51 207.2 425 36.5
Potri.017G041300 Populus trichocarpa HOM05D005409 ORTHO05D006456 4.0e-51 206.5 430 37.7
AL1G22590 Arabidopsis lyrata HOM05D005409 ORTHO05D006456 1.5e-50 204.5 408 36.8
Carub.0001s1109 Capsella rubella HOM05D005409 ORTHO05D006456 1.4e-48 198.0 424 37.0
A06p08100 Brassica napus HOM05D005409 ORTHO05D006456 1.2e-47 194.9 417 36.2
C05p09680 Brassica napus HOM05D005409 ORTHO05D006456 2.0e-47 194.1 416 36.1
BolC5t29709H Brassica oleracea HOM05D005409 ORTHO05D006456 2.0e-47 194.1 416 36.1
BraA06t24009Z Brassica rapa HOM05D005409 ORTHO05D006456 2.0e-47 194.1 417 36.2
GSVIVG01006401001 Vitis vinifera HOM05D005409 ORTHO05D006456 4.5e-47 193.0 441 34.7
THA.LOC104818924 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 7.8e-47 192.2 436 37.2
BcaC05g25024 Brassica carinata HOM05D005409 ORTHO05D006456 1.3e-46 191.4 416 35.6
Sabra17G0028000 Salix brachista HOM05D005409 ORTHO05D006456 2.9e-46 190.3 447 35.3
CARHR011750 Cardamine hirsuta HOM05D005409 ORTHO05D006456 3.8e-46 189.9 434 34.8
Thhalv10007161m.g Eutrema salsugineum HOM05D005409 ORTHO05D006456 2.5e-45 187.2 427 36.5
TWI38G0167 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 1.2e-44 184.9 374 36.4
Aa31LG1G3270 Aethionema arabicum HOM05D005409 ORTHO05D006456 1.6e-44 184.5 425 34.4
Actinidia26760 Actinidia chinensis HOM05D005409 ORTHO05D006456 8.9e-43 178.7 267 41.9
Actinidia24044 Actinidia chinensis HOM05D005409 ORTHO05D006456 2.0e-42 177.6 285 41.4
Sabra07G0096100 Salix brachista HOM05D005409 ORTHO05D006456 3.4e-42 176.8 446 35.0
THA.LOC104809524 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 2.2e-41 174.1 435 35.9
Atru.chr6.3116 Acer truncatum HOM05D005409 ORTHO05D006456 2.9e-41 173.7 451 33.9
Potri.007G119200 Populus trichocarpa HOM05D005409 ORTHO05D006456 1.9e-40 171.0 455 33.4
arahy.Tifrunner.gnm1.ann1.XK38U2 Arachis hypogaea HOM05D005409 ORTHO05D006456 1.1e-37 161.8 410 36.1
arahy.Tifrunner.gnm1.ann1.QZ9QK3 Arachis hypogaea HOM05D005409 ORTHO05D006456 1.2e-36 158.3 410 35.6
Atru.chr10.2047 Acer truncatum HOM05D005409 ORTHO05D006456 2.9e-33 147.1 214 46.7
RcHm_v2.0_Chr5g0004671 Rosa chinensis HOM05D005409 ORTHO05D006456 1.4e-32 144.8 117 62.4
GSVIVG01006635001 Vitis vinifera HOM05D005409 ORTHO05D006456 1.9e-32 144.4 111 64.9
Ah.09g237100 Amaranthus hybridus HOM05D000067 ORTHO05D006456 4.1e-32 143.3 341 36.7
HPP92_000870 Vanilla planifolia HOM05D005409 ORTHO05D006456 1.9e-29 134.4 441 32.9
ATR0804G077 Amborella trichopoda HOM05D005409 ORTHO05D006456 7.3e-29 132.5 505 30.5
RcHm_v2.0_Chr5g0004681 Rosa chinensis HOM05D005409 ORTHO05D006456 6.4e-25 119.4 272 34.2
Zm00001eb106500 Zea mays HOM05D005409 ORTHO05D006456 1.7e-22 111.3 404 30.9
Zm00001eb323520 Zea mays HOM05D005409 ORTHO05D006456 2.5e-21 107.5 358 32.1
Os07g0546100 Oryza sativa ssp. japonica HOM05D005409 ORTHO05D006456 4.0e-19 100.1 422 29.1
SMO118G0050 Selaginella moellendorffii HOM05D005409 ORTHO05D006456 6.0e-15 86.3 252 32.9
Pp3c20_3440 Physcomitrium patens HOM05D005409 ORTHO05D006456 5.1e-14 83.2 107 46.7
Mapoly0113s0049 Marchantia polymorpha HOM05D005409 ORTHO05D006456 1.5e-13 81.6 106 47.2
AagrBONN_evm.TU.Sc2ySwM_228.455 Anthoceros agrestis HOM05D005409 ORTHO05D006456 5.6e-13 79.7 107 45.8
Atru.chr10.2048 Acer truncatum HOM05D005409 ORTHO05D006456 3.4e-10 70.5 161 32.3
QL05p012359 Quercus lobata HOM05D005409 ORTHO05D006456 5.8e-10 69.7 121 42.1
CBR_g36658 Chara braunii HOM05D005409 ORTHO05D006456 2.2e-09 67.8 110 39.1


User provided reference genes

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