Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu050467.2 Olea europaea HOM05D001925 ORTHO05D005701 3.3e-245 851.3 434 100.0
Oeu015817.1 Olea europaea HOM05D001925 ORTHO05D005701 1.6e-170 603.2 543 63.5
Migut.B01766 Erythranthe guttata HOM05D001925 ORTHO05D005701 6.9e-134 481.5 537 52.3
vmacro13268 Vaccinium macrocarpon HOM05D001925 ORTHO05D005701 1.2e-130 470.7 541 50.6
Rhsim07G0013900 Rhododendron simsii HOM05D001925 ORTHO05D005701 1.3e-127 460.7 540 49.4
SGA_v2.0_scaffold4G02302 Striga asiatica HOM05D001925 ORTHO05D005701 8.1e-127 458.0 528 51.7
Peaxi162Scf00020g00723 Petunia axillaris HOM05D001925 ORTHO05D005701 6.9e-126 454.9 541 50.1
Actinidia10039 Actinidia chinensis HOM05D001925 ORTHO05D005701 9.0e-126 454.5 544 49.1
Lj6A572T62 Lonicera japonica HOM05D001925 ORTHO05D005701 1.2e-125 454.1 549 48.8
Lj6A578T43 Lonicera japonica HOM05D001925 ORTHO05D005701 2.0e-125 453.4 549 48.8
GSVIVG01008477001 Vitis vinifera HOM05D001925 ORTHO05D005701 1.0e-124 451.1 524 50.6
SalBow3G0216 Salvia bowleyana HOM05D001925 ORTHO05D005701 2.9e-124 449.5 523 50.5
CSS0009302 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D005701 1.4e-123 447.2 544 49.8
CSS0022743 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D005701 1.4e-123 447.2 544 49.8
CiPaw.01G062800 Carya illinoinensis HOM05D001925 ORTHO05D005701 5.5e-123 445.3 543 48.6
Nitab4.5_0000583g0200 Nicotiana tabacum HOM05D001925 ORTHO05D005701 4.6e-122 442.2 541 48.6
CAN.G78.90 Capsicum annuum HOM05D001925 ORTHO05D005701 1.3e-121 440.7 541 48.6
Lj7A511T78 Lonicera japonica HOM05D001925 ORTHO05D005701 7.4e-120 434.9 507 49.7
Haze_15511 Corylus avellana HOM05D001925 ORTHO05D005701 2.8e-119 433.0 552 47.5
Cc02_g38160 Coffea canephora HOM05D001925 ORTHO05D005701 6.2e-119 431.8 543 50.3
QL04p053597 Quercus lobata HOM05D001925 ORTHO05D005701 6.2e-119 431.8 546 47.4
Sopen01g038540 Solanum pennellii HOM05D001925 ORTHO05D005701 1.8e-118 430.3 539 47.7
Cfa003907 Carpinus fangiana HOM05D001925 ORTHO05D005701 6.9e-118 428.3 544 47.6
Solyc01g094760.3 Solanum lycopersicum HOM05D001925 ORTHO05D005701 9.0e-118 427.9 539 47.5
PGSC0003DMG400000174 Solanum tuberosum HOM05D001925 ORTHO05D005701 1.5e-117 427.2 540 47.4
TAR636G2317 Trochodendron aralioides HOM05D001925 ORTHO05D005701 3.2e-115 419.5 541 47.0
Sabra14G0062200 Salix brachista HOM05D001925 ORTHO05D005701 2.7e-114 416.4 542 47.6
DCAR_007446 Daucus carota HOM05D001925 ORTHO05D005701 3.9e-113 412.5 537 46.9
Cpa.g.sc11.17 Carica papaya HOM05D001925 ORTHO05D005701 1.9e-112 410.2 541 47.1
Nn6g33390 Nelumbo nucifera HOM05D001925 ORTHO05D005701 1.9e-112 410.2 543 44.8
ECA236G3836 Erigeron canadensis HOM05D001925 ORTHO05D005701 3.3e-112 409.5 526 47.5
HanXRQChr04g0121151 Helianthus annuus HOM05D001925 ORTHO05D005701 3.3e-112 409.5 541 46.4
Atru.chr5.509 Acer truncatum HOM05D001925 ORTHO05D005701 5.7e-112 408.7 541 46.0
Gohir.A11G089700 Gossypium hirsutum HOM05D001925 ORTHO05D005701 9.7e-112 407.9 540 46.7
Gohir.D11G094000 Gossypium hirsutum HOM05D001925 ORTHO05D005701 9.7e-112 407.9 539 46.2
Potri.014G085900 Populus trichocarpa HOM05D001925 ORTHO05D005701 9.7e-112 407.9 543 46.2
Glyma.09G258700 Glycine max HOM05D001925 ORTHO05D005701 1.6e-111 407.1 507 46.2
TPR.G37845 Trifolium pratense HOM05D001925 ORTHO05D005701 1.6e-111 407.1 526 45.6
CANSAT56G3724 Cannabis sativa HOM05D001925 ORTHO05D005701 8.2e-111 404.8 545 46.6
Gorai.007G100400 Gossypium raimondii HOM05D001925 ORTHO05D005701 1.1e-110 404.4 540 45.9
Duzib138G1334 Durio zibethinus HOM05D001925 ORTHO05D005701 4.1e-110 402.5 540 46.1
VMungo1383G1901 Vigna mungo HOM05D001925 ORTHO05D005701 4.1e-110 402.5 539 45.1
Thecc.01G357800 Theobroma cacao HOM05D001925 ORTHO05D005701 9.0e-110 401.4 538 46.7
Nitab4.5_0006018g0050 Nicotiana tabacum HOM05D001925 ORTHO05D005701 3.4e-109 399.4 515 47.4
Medtr7g077840 Medicago truncatula HOM05D001925 ORTHO05D005701 1.0e-108 397.9 540 43.3
Glyma.18G234000 Glycine max HOM05D001925 ORTHO05D005701 1.3e-108 397.5 544 43.9
Manes.05G033300 Manihot esculenta HOM05D001925 ORTHO05D005701 6.5e-108 395.2 539 44.7
FvH4_7g14490 Fragaria vesca HOM05D001925 ORTHO05D005701 8.5e-108 394.8 511 46.8
RcHm_v2.0_Chr1g0355901 Rosa chinensis HOM05D001925 ORTHO05D005701 1.4e-107 394.0 510 47.5
THA.LOC104825846 Tarenaya hassleriana HOM05D001925 ORTHO05D005701 3.2e-107 392.9 543 45.3
Lj1g0000866 Lotus japonicus HOM05D001925 ORTHO05D005701 5.5e-107 392.1 538 44.1
Ciclev10019660m.g Citrus clementina HOM05D001925 ORTHO05D005701 9.4e-107 391.3 540 45.0
Phvul.008G061800 Phaseolus vulgaris HOM05D001925 ORTHO05D005701 9.4e-107 391.3 539 44.3
COL.COLO4_12725 Corchorus olitorius HOM05D001925 ORTHO05D005701 2.7e-106 389.8 540 46.3
MBI04_g28752_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D005701 2.7e-106 389.8 545 44.2
MD01G1065000 Malus domestica HOM05D001925 ORTHO05D005701 4.6e-106 389.0 564 44.0
Psat4g001160 Pisum sativum HOM05D001925 ORTHO05D005701 6.1e-106 388.7 539 43.0
arahy.Tifrunner.gnm1.ann1.69YTHK Arachis hypogaea HOM05D001925 ORTHO05D005701 1.0e-105 387.9 540 43.5
TWI73G0882 Tripterygium wilfordii HOM05D001925 ORTHO05D005701 1.4e-105 387.5 533 43.7
BcaB02g07622 Brassica carinata HOM05D001925 ORTHO05D005701 2.3e-105 386.7 546 42.3
Ca_07928_v3 Cicer arietinum L. HOM05D001925 ORTHO05D005701 2.3e-105 386.7 543 43.3
RcHm_v2.0_Chr2g0161261 Rosa chinensis HOM05D001925 ORTHO05D005701 1.5e-104 384.0 509 46.4
Eucgr.D01236 Eucalyptus grandis HOM05D001925 ORTHO05D005701 5.7e-104 382.1 509 45.2
BcaC08g44822 Brassica carinata HOM05D001925 ORTHO05D005701 2.8e-103 379.8 536 42.9
C06p24120 Brassica napus HOM05D001925 ORTHO05D005701 1.8e-102 377.1 536 42.7
A07p23240 Brassica napus HOM05D001925 ORTHO05D005701 2.4e-102 376.7 535 42.6
Eucgr.L01587 Eucalyptus grandis HOM05D001925 ORTHO05D005701 2.4e-102 376.7 546 42.5
BolC6t37570H Brassica oleracea HOM05D001925 ORTHO05D005701 4.1e-102 375.9 536 42.7
BraA07t29988Z Brassica rapa HOM05D001925 ORTHO05D005701 9.1e-102 374.8 535 42.4
arahy.Tifrunner.gnm1.ann1.9GVB5D Arachis hypogaea HOM05D001925 ORTHO05D005701 3.4e-101 372.9 548 43.1
CARHR237820 Cardamine hirsuta HOM05D001925 ORTHO05D005701 3.4e-101 372.9 501 44.9
arahy.Tifrunner.gnm1.ann1.NC5V2N Arachis hypogaea HOM05D001925 ORTHO05D005701 4.5e-101 372.5 548 43.4
AT4G29910 Arabidopsis thaliana HOM05D001925 ORTHO05D005701 5.9e-101 372.1 542 43.0
Sp5g05460 Schrenkiella parvula HOM05D001925 ORTHO05D005701 1.0e-100 371.3 538 42.9
PGR004G0833 Punica granatum HOM05D001925 ORTHO05D005701 2.2e-100 370.2 547 43.1
AL7G22330 Arabidopsis lyrata HOM05D001925 ORTHO05D005701 2.9e-100 369.8 544 42.1
ClCG06G003620 Citrullus lanatus HOM05D001925 ORTHO05D005701 3.8e-100 369.4 540 43.1
Prupe.2G172000 Prunus persica HOM05D001925 ORTHO05D005701 5.0e-100 369.0 504 45.6
Sed0000605 Sechium edule HOM05D001925 ORTHO05D005701 1.1e-99 367.9 540 43.7
Carub.0007s1073 Capsella rubella HOM05D001925 ORTHO05D005701 1.6e-98 364.0 406 49.5
Lsat_1_v5_gn_7_4881 Lactuca sativa HOM05D001925 ORTHO05D005701 1.4e-97 360.9 530 42.6
MELO3C021204.2 Cucumis melo HOM05D001925 ORTHO05D005701 1.8e-97 360.5 540 43.0
BcaB02g07621 Brassica carinata HOM05D001925 ORTHO05D005701 2.3e-97 360.1 536 41.4
FAN10G1478 Fragaria x ananassa HOM05D001925 ORTHO05D005701 1.5e-96 357.5 511 44.4
FAN06G1763 Fragaria x ananassa HOM05D001925 ORTHO05D005701 3.3e-96 356.3 511 44.2
FAN03G1293 Fragaria x ananassa HOM05D001925 ORTHO05D005701 4.4e-96 355.9 511 44.2
arahy.Tifrunner.gnm1.ann1.IR4EKV Arachis hypogaea HOM05D001925 ORTHO05D005701 5.7e-96 355.5 299 62.2
FAN10G3665 Fragaria x ananassa HOM05D001925 ORTHO05D005701 5.7e-96 355.5 511 44.2
FAN06G3551 Fragaria x ananassa HOM05D001925 ORTHO05D005701 7.4e-96 355.1 511 44.2
Lalb_Chr13g0304081 Lupinus albus HOM05D001925 ORTHO05D005701 3.7e-95 352.8 528 42.4
Thhalv10005869m.g Eutrema salsugineum HOM05D001925 ORTHO05D005701 1.2e-93 347.8 547 40.8
FAN01G0375 Fragaria x ananassa HOM05D001925 ORTHO05D005701 2.6e-93 346.7 512 43.6
Aqoxy2G04021 Aquilegia oxysepala HOM05D001925 ORTHO05D005701 1.7e-92 344.0 542 39.5
PSO384G0118 Papaver somniferum HOM05D001925 ORTHO05D005701 9.4e-91 338.2 566 40.5
ATR0068G004 Amborella trichopoda HOM05D001925 ORTHO05D005701 1.6e-90 337.4 513 40.9
Carub.0002s1689 Capsella rubella HOM05D001925 ORTHO05D005701 2.1e-90 337.0 302 57.6
EL10Ac1g00402 Beta vulgaris HOM05D001925 ORTHO05D005701 4.7e-90 335.9 552 40.2
ECA236G4017 Erigeron canadensis HOM05D001925 ORTHO05D005701 7.4e-88 328.6 294 60.2
Hund16654 Selenicereus undatus HOM05D001925 ORTHO05D005701 9.7e-88 328.2 533 39.6
CDE08G0676 Ceratophyllum demersum HOM05D001925 ORTHO05D005701 2.2e-87 327.0 535 39.4
Aa31LG2G20640 Aethionema arabicum HOM05D001925 ORTHO05D005701 5.3e-86 322.4 537 39.5
Ah.05g180520 Amaranthus hybridus HOM05D001925 ORTHO05D001453 1.9e-83 313.9 543 38.5
Zm00001eb214490 Zea mays HOM05D001925 ORTHO05D005701 2.5e-83 313.5 415 45.5
Os03g0759500 Oryza sativa ssp. japonica HOM05D001925 ORTHO05D005701 6.1e-82 308.9 306 53.9
Dinv43827 Davidia involucrata HOM05D001925 ORTHO05D005701 2.3e-81 307.0 433 43.6
HPP92_019868 Vanilla planifolia HOM05D001925 ORTHO05D005701 1.9e-75 287.3 302 50.7
SEGI_03119 Sequoiadendron giganteum HOM05D001925 ORTHO05D005701 5.7e-72 275.8 298 48.0
AUR62004371 Chenopodium quinoa HOM05D001925 ORTHO05D005701 4.9e-71 272.7 550 34.7
AUR62022580 Chenopodium quinoa HOM05D001925 ORTHO05D005701 1.3e-68 264.6 550 34.7
MD07G1135400 Malus domestica HOM05D001925 ORTHO05D005701 6.6e-68 262.3 326 50.0
Sc01g0003490 Simmondsia chinensis HOM05D001925 ORTHO05D005701 8.3e-63 245.4 425 38.1
C08p32440 Brassica napus HOM05D001925 ORTHO05D005701 3.5e-61 240.0 414 38.9
arahy.Tifrunner.gnm1.ann1.SID920 Arachis hypogaea HOM05D001925 ORTHO05D005701 7.8e-61 238.8 386 39.9
BolC8t50859H Brassica oleracea HOM05D001925 ORTHO05D005701 1.0e-60 238.4 414 38.9
PSO339G3045 Papaver somniferum HOM05D001925 ORTHO05D005701 2.0e-53 214.2 310 44.5
BcaC07g40027 Brassica carinata HOM05D001925 ORTHO05D005701 5.0e-52 209.5 402 39.8
CsaV3_6G000620 Cucumis sativus L. HOM05D001925 ORTHO05D005701 2.1e-50 204.1 419 34.6
Pp3c17_13600 Physcomitrium patens HOM05D001925 ORTHO05D005701 4.7e-50 203.0 319 37.6
arahy.Tifrunner.gnm1.ann1.IM3547 Arachis hypogaea HOM05D001925 ORTHO05D005701 1.2e-48 198.4 189 56.1
SMO147G0283 Selaginella moellendorffii HOM05D001925 ORTHO05D005701 2.6e-48 197.2 301 38.5
TPR.G26686 Trifolium pratense HOM05D001925 ORTHO05D005701 2.6e-48 197.2 242 47.5
AagrBONN_evm.TU.Sc2ySwM_368.2511 Anthoceros agrestis HOM05D001925 ORTHO05D005701 3.4e-48 196.8 305 39.0
arahy.Tifrunner.gnm1.ann1.FEJ64N Arachis hypogaea HOM05D001925 ORTHO05D005701 5.8e-48 196.1 198 54.0
arahy.Tifrunner.gnm1.ann1.D25PMP Arachis hypogaea HOM05D001925 ORTHO05D005701 9.2e-46 188.7 354 37.3
Mapoly0177s0008 Marchantia polymorpha HOM05D001925 ORTHO05D005701 8.9e-41 172.2 297 35.7
Dinv43826 Davidia involucrata HOM05D001925 ORTHO05D005701 2.4e-38 164.1 111 76.6
BraA09t40455Z Brassica rapa HOM05D001925 ORTHO05D005701 6.2e-34 149.4 180 51.1
TPR.G16202 Trifolium pratense HOM05D001925 ORTHO05D005701 9.9e-32 142.1 123 61.0
C06p24140 Brassica napus HOM05D001925 ORTHO05D005701 1.7e-31 141.4 113 63.7
FAN24G1219 Fragaria x ananassa HOM05D001925 ORTHO05D005701 6.0e-29 132.9 105 65.7
FvH4_2g10060 Fragaria vesca HOM05D001925 ORTHO05D005701 2.3e-28 131.0 193 42.5
BcaC08g44824 Brassica carinata HOM05D001925 ORTHO05D005701 4.0e-25 120.2 115 56.5
FvH4_2g10061 Fragaria vesca HOM05D001925 ORTHO05D005701 4.4e-24 116.7 97 62.9
FAN15G3430 Fragaria x ananassa HOM05D001925 ORTHO05D005701 9.9e-24 115.5 104 58.7
A09p50040 Brassica napus HOM05D001925 ORTHO05D005701 1.9e-22 111.3 88 68.2
Zm00001eb057980 Zea mays HOM05D001925 ORTHO05D005701 9.3e-22 109.0 212 35.4
arahy.Tifrunner.gnm1.ann1.ZHBQ27 Arachis hypogaea HOM05D002506 ORTHO05D002879 1.9e-19 101.3 89 62.9
PRCOL_00005952 Prasinoderma coloniale HOM05D001925 ORTHO05D005701 1.8e-17 94.7 319 26.6
C09p49930 Brassica napus HOM05D001925 ORTHO05D039571 3.9e-12 77.0 122 41.0
Potri.001G135975 Populus trichocarpa HOM05D001925 ORTHO05D005701 2.5e-11 74.3 266 25.9
MCO11G226 Micromonas commoda HOM05D001925 ORTHO05D005701 3.3e-11 73.9 221 30.8
CBR_g58810 Chara braunii HOM05D001925 ORTHO05D005701 2.1e-10 71.2 129 37.2
BcaC07g40074 Brassica carinata HOM05D001925 ORTHO05D005701 3.1e-09 67.4 59 61.0


User provided reference genes

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