Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu050454.1 Olea europaea HOM05D007617 ORTHO05D007195 6.0e-65 250.8 132 100.0
Oeu054643.1 Olea europaea HOM05D007617 ORTHO05D007195 1.3e-48 196.4 132 78.8
Oeu023836.1 Olea europaea HOM05D007617 ORTHO05D007195 1.5e-20 103.2 162 47.5
DCAR_011273 Daucus carota HOM05D007617 ORTHO05D007195 1.5e-15 86.7 143 46.2
PGSC0003DMG400012616 Solanum tuberosum HOM05D007617 ORTHO05D007195 9.7e-15 84.0 139 46.0
Hma1.2p1_0818F.1_g223400 Hydrangea macrophylla HOM05D007617 ORTHO05D007195 1.3e-14 83.6 140 45.7
Migut.K01418 Erythranthe guttata HOM05D007617 ORTHO05D007195 2.2e-14 82.8 137 47.4
Nitab4.5_0000040g0620 Nicotiana tabacum HOM05D007617 ORTHO05D007195 2.2e-14 82.8 146 43.8
vmacro18302 Vaccinium macrocarpon HOM05D007617 ORTHO05D007195 2.4e-13 79.3 135 43.0
SGA_v2.0_scaffold47G17524 Striga asiatica HOM05D007617 ORTHO05D007195 3.1e-13 79.0 132 47.0
Ciclev10017789m.g Citrus clementina HOM05D007617 ORTHO05D007195 7.0e-13 77.8 144 43.8
Nitab4.5_0004496g0030 Nicotiana tabacum HOM05D007617 ORTHO05D007195 9.1e-13 77.4 142 42.3
Sopen02g038090 Solanum pennellii HOM05D007617 ORTHO05D007195 9.1e-13 77.4 139 43.9
Sopen02g017030 Solanum pennellii HOM05D007617 ORTHO05D007195 1.0e-11 73.9 133 41.4
Solyc02g067910.1 Solanum lycopersicum HOM05D007617 ORTHO05D007195 1.3e-11 73.6 133 41.4
CAN.G1057.14 Capsicum annuum HOM05D007617 ORTHO05D007195 1.7e-11 73.2 134 41.8
MSTRG.15542 Avicennia marina HOM05D007617 ORTHO05D007195 2.2e-11 72.8 136 40.4
QL02p073546 Quercus lobata HOM05D007617 ORTHO05D007195 2.2e-11 72.8 137 40.1
FAN13G2538 Fragaria x ananassa HOM05D007617 ORTHO05D007195 3.8e-11 72.0 130 42.3
FAN18G3066 Fragaria x ananassa HOM05D007617 ORTHO05D007195 8.5e-11 70.9 131 41.2
FAN08G2040 Fragaria x ananassa HOM05D007617 ORTHO05D007195 1.1e-10 70.5 131 42.0
Nitab4.5_0014774g0010 Nicotiana tabacum HOM05D007617 ORTHO05D007195 1.9e-10 69.7 136 41.2
FvH4_5g06710 Fragaria vesca HOM05D007617 ORTHO05D007195 2.5e-10 69.3 131 41.2
CiPaw.03G047400 Carya illinoinensis HOM05D007617 ORTHO05D007195 5.5e-10 68.2 110 45.5
CiPaw.09G026700 Carya illinoinensis HOM05D007617 ORTHO05D007195 5.5e-10 68.2 110 45.5
Atru.chr6.2453 Acer truncatum HOM05D007617 ORTHO05D007195 7.2e-10 67.8 80 53.8
Psat6g179560 Pisum sativum HOM05D007617 ORTHO05D007195 2.1e-09 66.2 131 38.2
Lsat_1_v5_gn_2_91001 Lactuca sativa HOM05D007617 ORTHO05D007195 3.6e-09 65.5 136 41.2
Lsat_1_v5_gn_2_94241 Lactuca sativa HOM05D007617 ORTHO05D007195 4.7e-09 65.1 135 40.0
RcHm_v2.0_Chr7g0191931 Rosa chinensis HOM05D007617 ORTHO05D007195 4.7e-09 65.1 73 58.9
Cfa007314 Carpinus fangiana HOM05D000615 ORTHO05D007195 6.1e-09 64.7 138 39.1
PGR142G0897 Punica granatum HOM05D007617 ORTHO05D007195 6.1e-09 64.7 138 37.7
CANSAT64G0294 Cannabis sativa HOM05D007617 ORTHO05D007195 8.0e-09 64.3 90 48.9
Migut.K00629 Erythranthe guttata HOM05D007617 ORTHO05D007195 8.0e-09 64.3 68 57.4
Ciclev10022896m.g Citrus clementina HOM05D007617 ORTHO05D007195 1.4e-08 63.5 134 39.6
Lalb_Chr21g0317701 Lupinus albus HOM05D007617 ORTHO05D007195 1.4e-08 63.5 132 38.6
Cc07_g00130 Coffea canephora HOM05D007617 ORTHO05D007195 1.8e-08 63.2 157 38.9
Phvul.004G059700 Phaseolus vulgaris HOM05D007617 ORTHO05D007195 1.8e-08 63.2 66 59.1
A06p19360 Brassica napus HOM05D010525 ORTHO05D007195 3.0e-08 62.4 131 39.7
ClCG05G013140 Citrullus lanatus HOM05D007617 ORTHO05D007195 3.0e-08 62.4 125 42.4
ATR1145G009 Amborella trichopoda HOM05D007617 ORTHO05D007195 4.0e-08 62.0 135 34.8
Aqoxy5G03650 Aquilegia oxysepala HOM05D007617 ORTHO05D007195 4.0e-08 62.0 71 53.5
PGSC0003DMG400006919 Solanum tuberosum HOM05D007617 ORTHO05D007195 4.0e-08 62.0 132 38.6
Prupe.3G296000 Prunus persica HOM05D007617 ORTHO05D007195 5.2e-08 61.6 69 55.1
Sed0018064 Sechium edule HOM05D007617 ORTHO05D007195 5.2e-08 61.6 134 38.1
AL5G27740 Arabidopsis lyrata HOM05D010525 ORTHO05D007195 6.7e-08 61.2 140 40.0
BraA06t25018Z Brassica rapa HOM05D010525 ORTHO05D007195 6.7e-08 61.2 134 41.0
Potri.012G090700 Populus trichocarpa HOM05D007617 ORTHO05D007195 8.8e-08 60.8 66 56.1
Sp5g13710 Schrenkiella parvula HOM05D010525 ORTHO05D007195 8.8e-08 60.8 137 36.5
FAN04G0785 Fragaria x ananassa HOM05D007617 ORTHO05D007195 1.2e-07 60.5 133 39.8
MD06G1161600 Malus domestica HOM05D007617 ORTHO05D007195 1.2e-07 60.5 88 47.7
Medtr1g093790 Medicago truncatula HOM05D007617 ORTHO05D007195 1.2e-07 60.5 132 37.1
VMungo0464G0279 Vigna mungo HOM05D007617 ORTHO05D007195 1.2e-07 60.5 130 43.1
Dinv33408 Davidia involucrata HOM05D007617 ORTHO05D007195 2.0e-07 59.7 112 43.8
Lj2g0010313 Lotus japonicus HOM05D007617 ORTHO05D007195 2.0e-07 59.7 134 38.8
SGA_v2.0_scaffold30G12404 Striga asiatica HOM05D007617 ORTHO05D007195 2.0e-07 59.7 67 58.2
Carub.0008s2391 Capsella rubella HOM05D010525 ORTHO05D007195 2.6e-07 59.3 137 32.1
Glyma.05G114700 Glycine max HOM05D007617 ORTHO05D007195 2.6e-07 59.3 120 37.5
Lsat_1_v5_gn_3_30061 Lactuca sativa HOM05D007617 ORTHO05D007195 3.3e-07 58.9 100 46.0
TPR.G31739 Trifolium pratense HOM05D007617 ORTHO05D007195 3.3e-07 58.9 134 34.3
Aa31LG1G18820 Aethionema arabicum HOM05D010525 ORTHO05D007195 4.4e-07 58.5 138 37.7
Thhalv10010898m.g Eutrema salsugineum HOM05D010525 ORTHO05D007195 4.4e-07 58.5 138 34.8
BcaB01g00826 Brassica carinata HOM05D010525 ORTHO05D007195 5.7e-07 58.2 139 37.4
Lalb_Chr02g0158101 Lupinus albus HOM05D007617 ORTHO05D007195 5.7e-07 58.2 70 51.4
Hund06047 Selenicereus undatus HOM05D007617 ORTHO05D007195 9.7e-07 57.4 58 58.6
Manes.14G057300 Manihot esculenta HOM05D007617 ORTHO05D007195 1.3e-06 57.0 140 34.3
Rhsim08G0047600 Rhododendron simsii HOM05D007617 ORTHO05D007195 1.3e-06 57.0 134 36.6
MSTRG.549 Avicennia marina HOM05D007617 ORTHO05D007195 1.7e-06 56.6 69 50.7
CARHR276990 Cardamine hirsuta HOM05D010525 ORTHO05D007195 2.2e-06 56.2 68 54.4
TAR374G0075 Trochodendron aralioides HOM05D007617 ORTHO05D007195 2.2e-06 56.2 139 36.7
Glyma.19G053100 Glycine max HOM05D007617 ORTHO05D007195 2.8e-06 55.8 66 51.5
Haze_14778 Corylus avellana HOM05D007617 ORTHO05D007195 3.7e-06 55.5 116 36.2
Sp2g26280 Schrenkiella parvula HOM05D010525 ORTHO05D007195 3.7e-06 55.5 132 35.6
BcaC07g39315 Brassica carinata HOM05D010525 ORTHO05D007195 4.8e-06 55.1 136 36.8
C08p23300 Brassica napus HOM05D010525 ORTHO05D007195 4.8e-06 55.1 136 36.8
BolC8t49961H Brassica oleracea HOM05D010525 ORTHO05D007195 4.8e-06 55.1 136 36.8
Manes.06G112400 Manihot esculenta HOM05D007617 ORTHO05D007195 6.3e-06 54.7 72 45.8
Sc04g0009720 Simmondsia chinensis HOM05D007617 ORTHO05D007195 6.3e-06 54.7 69 55.1


User provided reference genes

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