Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu050433.3 Olea europaea HOM05D003681 ORTHO05D004703 0.0e+00 1459.9 789 100.0
Oeu058755.3 Olea europaea HOM05D003681 ORTHO05D004703 0.0e+00 1144.8 776 82.1
MSTRG.3111 Avicennia marina HOM05D003681 ORTHO05D004703 9.1e-302 1040.0 747 76.4
Dinv33384 Davidia involucrata HOM05D003681 ORTHO05D004703 2.2e-295 1018.8 755 73.5
Migut.H00059 Erythranthe guttata HOM05D003681 ORTHO05D004703 2.8e-290 1001.9 746 73.1
Actinidia18423 Actinidia chinensis HOM05D003681 ORTHO05D004703 4.0e-289 998.0 751 72.8
Dinv25694 Davidia involucrata HOM05D003681 ORTHO05D004703 1.2e-288 996.5 755 72.2
PGSC0003DMG400006971 Solanum tuberosum HOM05D003681 ORTHO05D004703 1.1e-286 989.9 745 71.3
Lj7A605G77 Lonicera japonica HOM05D003681 ORTHO05D004703 2.4e-286 988.8 753 72.9
CSS0025950 Camellia sinensis var. sinensis HOM05D003681 ORTHO05D004703 5.4e-286 987.6 752 72.5
Cc07_g00400 Coffea canephora HOM05D003681 ORTHO05D004703 2.7e-285 985.3 744 72.3
SalBow1G2960 Salvia bowleyana HOM05D003681 ORTHO05D004703 4.5e-285 984.6 743 73.4
SalBow1G7977 Salvia bowleyana HOM05D003681 ORTHO05D004703 4.5e-285 984.6 743 73.4
Sopen02g017120 Solanum pennellii HOM05D003681 ORTHO05D004703 5.9e-285 984.2 747 71.0
QL02p072923 Quercus lobata HOM05D003681 ORTHO05D004703 1.7e-284 982.6 758 70.1
CiPaw.04G033000 Carya illinoinensis HOM05D003681 ORTHO05D004703 2.9e-284 981.9 756 70.4
GSVIVG01001851001 Vitis vinifera HOM05D003681 ORTHO05D004703 7.3e-283 977.2 757 70.8
Actinidia16950 Actinidia chinensis HOM05D003681 ORTHO05D004703 1.8e-281 972.6 751 71.9
CAN.G473.58 Capsicum annuum HOM05D003681 ORTHO05D004703 2.0e-280 969.1 747 70.5
Thecc.04G027500 Theobroma cacao HOM05D003681 ORTHO05D004703 2.0e-280 969.1 747 69.5
SGA_v2.0_scaffold18G08242 Striga asiatica HOM05D003681 ORTHO05D004703 6.4e-279 964.1 763 70.9
Solyc02g067990.3 Solanum lycopersicum HOM05D003681 ORTHO05D004703 8.3e-279 963.8 730 70.7
PGSC0003DMG400020227 Solanum tuberosum HOM05D003681 ORTHO05D004703 3.2e-278 961.8 744 70.6
CAN.G1057.25 Capsicum annuum HOM05D003681 ORTHO05D004703 1.2e-277 959.9 747 69.7
Peaxi162Scf00420g00351 Petunia axillaris HOM05D003681 ORTHO05D004703 2.3e-276 955.7 744 69.5
Cpa.g.sc130.41 Carica papaya HOM05D003681 ORTHO05D004703 5.0e-276 954.5 756 68.5
MD09G1017400 Malus domestica HOM05D003681 ORTHO05D004703 7.3e-275 950.7 756 69.0
CANSAT64G2654 Cannabis sativa HOM05D003681 ORTHO05D004703 9.5e-275 950.3 761 68.1
CiPaw.03G050400 Carya illinoinensis HOM05D003681 ORTHO05D004703 2.8e-274 948.7 756 68.5
Nitab4.5_0000040g0490 Nicotiana tabacum HOM05D003681 ORTHO05D004703 3.6e-274 948.3 750 69.5
Atru.chr6.2486 Acer truncatum HOM05D003681 ORTHO05D004703 4.7e-274 948.0 756 68.3
Ciclev10014307m.g Citrus clementina HOM05D003681 ORTHO05D004703 1.1e-273 946.8 738 68.8
CSS0035050 Camellia sinensis var. sinensis HOM05D003681 ORTHO05D004703 1.8e-273 946.0 751 69.5
Sopen02g038450 Solanum pennellii HOM05D003681 ORTHO05D004703 1.8e-273 946.0 746 70.0
Solyc02g093810.3 Solanum lycopersicum HOM05D003681 ORTHO05D004703 3.1e-273 945.3 746 70.0
Nitab4.5_0008718g0020 Nicotiana tabacum HOM05D003681 ORTHO05D004703 6.8e-273 944.1 749 69.3
TWI12G0555 Tripterygium wilfordii HOM05D003681 ORTHO05D004703 6.8e-273 944.1 756 68.3
Gohir.D09G033600 Gossypium hirsutum HOM05D003681 ORTHO05D004703 3.4e-272 941.8 765 66.9
Gorai.006G038600 Gossypium raimondii HOM05D003681 ORTHO05D004703 3.4e-272 941.8 765 66.9
TAR374G1530 Trochodendron aralioides HOM05D003681 ORTHO05D004703 5.8e-272 941.0 758 68.3
Potri.001G337700 Populus trichocarpa HOM05D003681 ORTHO05D004703 7.5e-272 940.6 749 69.3
Cfa007279 Carpinus fangiana HOM05D003681 ORTHO05D004703 3.7e-271 938.3 749 68.2
Potri.001G337600 Populus trichocarpa HOM05D003681 ORTHO05D004703 4.9e-271 937.9 749 69.3
Manes.17G107300 Manihot esculenta HOM05D003681 ORTHO05D004703 1.4e-270 936.4 749 67.8
Prupe.3G299500 Prunus persica HOM05D003681 ORTHO05D004703 1.4e-270 936.4 756 68.4
Manes.15G156300 Manihot esculenta HOM05D003681 ORTHO05D004703 3.2e-270 935.3 748 67.9
Gohir.A11G065000 Gossypium hirsutum HOM05D003681 ORTHO05D004703 4.1e-270 934.9 747 67.3
MD17G1018200 Malus domestica HOM05D003681 ORTHO05D004703 4.6e-269 931.4 756 68.4
Nitab4.5_0001863g0130 Nicotiana tabacum HOM05D003681 ORTHO05D004703 4.6e-269 931.4 753 68.1
TAR622G1195 Trochodendron aralioides HOM05D003681 ORTHO05D004703 1.7e-268 929.5 758 67.5
VMungo0464G1197 Vigna mungo HOM05D003681 ORTHO05D004703 6.6e-268 927.5 747 68.3
Gohir.A09G033400 Gossypium hirsutum HOM05D003681 ORTHO05D004703 5.6e-267 924.5 765 65.8
Duzib187G0106 Durio zibethinus HOM05D003681 ORTHO05D004703 9.5e-267 923.7 750 67.1
Glyma.05G073400 Glycine max HOM05D003681 ORTHO05D004703 1.6e-266 922.9 749 67.8
Phvul.004G057300 Phaseolus vulgaris HOM05D003681 ORTHO05D004703 2.1e-266 922.5 752 67.7
TWI36G0744 Tripterygium wilfordii HOM05D003681 ORTHO05D004703 2.8e-266 922.2 756 66.7
Sabra16G0218500 Salix brachista HOM05D003681 ORTHO05D004703 8.1e-266 920.6 734 69.1
Glyma.19G077600 Glycine max HOM05D003681 ORTHO05D004703 1.1e-265 920.2 749 67.8
PGR142G3554 Punica granatum HOM05D003681 ORTHO05D004703 1.4e-265 919.8 757 66.4
vmacro05923 Vaccinium macrocarpon HOM05D003681 ORTHO05D004703 1.4e-265 919.8 749 68.4
SGA_v2.0_scaffold135G34941 Striga asiatica HOM05D003681 ORTHO05D004703 1.8e-265 919.5 765 67.7
Hma1.2p1_0279F.1_g112260 Hydrangea macrophylla HOM05D003681 ORTHO05D004703 3.1e-265 918.7 791 66.0
Haze_14813 Corylus avellana HOM05D003681 ORTHO05D004703 5.2e-265 917.9 767 66.4
TAR371G0788 Trochodendron aralioides HOM05D003681 ORTHO05D004703 2.6e-264 915.6 754 69.9
Gorai.007G074100 Gossypium raimondii HOM05D003681 ORTHO05D004703 9.9e-264 913.7 747 66.4
Gohir.D11G069300 Gossypium hirsutum HOM05D003681 ORTHO05D004703 1.3e-263 913.3 747 66.1
Peaxi162Scf00080g01724 Petunia axillaris HOM05D003681 ORTHO05D004703 4.9e-263 911.4 744 67.3
COL.COLO4_29274 Corchorus olitorius HOM05D003681 ORTHO05D004703 8.3e-263 910.6 754 65.8
CSS0007013 Camellia sinensis var. sinensis HOM05D003681 ORTHO05D004703 1.4e-262 909.8 720 69.3
Eucgr.I01693 Eucalyptus grandis HOM05D003681 ORTHO05D004703 1.9e-262 909.4 756 67.3
vmacro18313 Vaccinium macrocarpon HOM05D003681 ORTHO05D004703 2.3e-260 902.5 751 67.0
Gohir.D10G085200 Gossypium hirsutum HOM05D003681 ORTHO05D004703 8.6e-260 900.6 747 65.9
Aa31LG9G900 Aethionema arabicum HOM05D003681 ORTHO05D004703 4.3e-259 898.3 758 65.2
Gorai.011G093100 Gossypium raimondii HOM05D003681 ORTHO05D004703 7.3e-259 897.5 747 65.9
Lj2g0006828 Lotus japonicus HOM05D003681 ORTHO05D004703 7.3e-259 897.5 751 67.1
arahy.Tifrunner.gnm1.ann1.0QF2GW Arachis hypogaea HOM05D003681 ORTHO05D004703 2.1e-258 896.0 748 67.4
ClCG05G013220 Citrullus lanatus HOM05D003681 ORTHO05D004703 2.1e-258 896.0 748 66.4
CsaV3_3G027310 Cucumis sativus L. HOM05D003681 ORTHO05D004703 4.7e-258 894.8 751 66.6
BolC6t37131H Brassica oleracea HOM05D003681 ORTHO05D004703 8.1e-258 894.0 754 65.0
Sc03g0006880 Simmondsia chinensis HOM05D003681 ORTHO05D004703 1.8e-257 892.9 749 65.7
Carub.0007s3474 Capsella rubella HOM05D003681 ORTHO05D004703 2.4e-257 892.5 756 65.2
Sed0015235 Sechium edule HOM05D003681 ORTHO05D004703 2.4e-257 892.5 747 66.1
Thhalv10027657m.g Eutrema salsugineum HOM05D003681 ORTHO05D004703 1.5e-256 889.8 757 65.3
Lalb_Chr02g0157941 Lupinus albus HOM05D003681 ORTHO05D004703 1.5e-256 889.8 745 65.9
BcaC08g44481 Brassica carinata HOM05D003681 ORTHO05D004703 2.6e-256 889.0 754 64.5
Sp7g01150 Schrenkiella parvula HOM05D003681 ORTHO05D004703 4.4e-256 888.3 756 64.9
C06p19360 Brassica napus HOM05D003681 ORTHO05D004703 5.8e-256 887.9 754 64.3
BraA07t29742Z Brassica rapa HOM05D003681 ORTHO05D004703 7.6e-256 887.5 754 64.7
RcHm_v2.0_Chr2g0174171 Rosa chinensis HOM05D003681 ORTHO05D004703 7.6e-256 887.5 755 65.6
AT5G40740 Arabidopsis thaliana HOM05D003681 ORTHO05D004703 9.9e-256 887.1 755 64.9
CARHR213770 Cardamine hirsuta HOM05D003681 ORTHO05D004703 9.9e-256 887.1 757 65.4
BcaB02g07929 Brassica carinata HOM05D003681 ORTHO05D004703 1.7e-255 886.3 754 64.6
AL7G49000 Arabidopsis lyrata HOM05D003681 ORTHO05D004703 2.2e-255 885.9 755 64.8
Sed0021158 Sechium edule HOM05D003681 ORTHO05D004703 3.8e-255 885.2 749 65.7
A07p20510 Brassica napus HOM05D003681 ORTHO05D004703 1.4e-254 883.2 754 64.5
Nn4g22444 Nelumbo nucifera HOM05D003681 ORTHO05D004703 1.9e-254 882.9 760 65.8
BraA04t17035Z Brassica rapa HOM05D003681 ORTHO05D004703 3.2e-254 882.1 757 64.5
Rhsim10G0011100 Rhododendron simsii HOM05D003681 ORTHO05D004703 3.2e-254 882.1 757 66.6
C04p47540 Brassica napus HOM05D003681 ORTHO05D004703 7.1e-254 880.9 757 64.5
BolC4t26356H Brassica oleracea HOM05D003681 ORTHO05D004703 9.2e-254 880.6 757 64.6
A04p13760 Brassica napus HOM05D003681 ORTHO05D004703 1.6e-253 879.8 759 64.4
Hund06716 Selenicereus undatus HOM05D003681 ORTHO05D004703 2.1e-253 879.4 757 63.9
Aqoxy3G01435 Aquilegia oxysepala HOM05D003681 ORTHO05D004703 2.7e-253 879.0 758 64.6
Rhsim08G0046300 Rhododendron simsii HOM05D003681 ORTHO05D004703 2.7e-253 879.0 772 65.2
Actinidia36165 Actinidia chinensis HOM05D003681 ORTHO05D004703 3.5e-253 878.6 735 67.5
FAN14G5093 Fragaria x ananassa HOM05D003681 ORTHO05D004703 1.7e-252 876.3 758 65.3
HanXRQChr07g0199161 Helianthus annuus HOM05D003681 ORTHO05D004703 3.0e-252 875.5 746 65.0
EL10Ac4g08610 Beta vulgaris HOM05D003681 ORTHO05D004703 1.5e-251 873.2 751 63.6
THA.LOC104805345 Tarenaya hassleriana HOM05D003681 ORTHO05D004703 1.5e-251 873.2 759 64.3
FAN09G4630 Fragaria x ananassa HOM05D003681 ORTHO05D004703 8.1e-250 867.5 758 64.8
FvH4_6g52640 Fragaria vesca HOM05D003681 ORTHO05D004703 2.4e-249 865.9 755 64.9
BcaB06g27549 Brassica carinata HOM05D003681 ORTHO05D004703 7.6e-248 860.9 747 64.0
Sabra16G0218400 Salix brachista HOM05D003681 ORTHO05D004703 1.3e-247 860.1 734 65.5
ECA238G4183 Erigeron canadensis HOM05D003681 ORTHO05D004703 2.9e-247 859.0 722 65.7
FAN05G4404 Fragaria x ananassa HOM05D003681 ORTHO05D004703 1.1e-246 857.1 785 62.7
Lalb_Chr21g0317601 Lupinus albus HOM05D003681 ORTHO05D004703 2.1e-245 852.8 745 63.8
PSO017G2495 Papaver somniferum HOM05D003681 ORTHO05D004703 2.7e-245 852.4 766 63.3
FAN02G4174 Fragaria x ananassa HOM05D003681 ORTHO05D004703 1.3e-244 850.1 755 64.1
Psat1g082400 Pisum sativum HOM05D003681 ORTHO05D004703 1.7e-244 849.7 749 64.8
Medtr6g022730 Medicago truncatula HOM05D003681 ORTHO05D004703 5.1e-244 848.2 752 64.5
MBI11_g11079_MAGBIO Magnolia biondii HOM05D003681 ORTHO05D004703 1.4e-241 840.1 763 62.9
PSO478G5006 Papaver somniferum HOM05D003681 ORTHO05D004703 1.2e-240 837.0 755 63.0
AUR62036017 Chenopodium quinoa HOM05D003681 ORTHO05D004703 4.5e-240 835.1 734 62.9
AUR62035509 Chenopodium quinoa HOM05D003681 ORTHO05D004703 7.6e-232 807.7 733 61.9
Sc03g0007020 Simmondsia chinensis HOM05D003681 ORTHO05D004703 3.9e-228 795.4 747 60.8
Ca_04403_v3 Cicer arietinum L. HOM05D003681 ORTHO05D004703 1.1e-227 793.9 742 62.3
Lsat_1_v5_gn_2_93641 Lactuca sativa HOM05D003681 ORTHO05D004703 3.4e-224 782.3 756 60.7
Lj1g0019639 Lotus japonicus HOM05D003681 ORTHO05D004703 7.9e-221 771.2 761 58.5
TPR.G36528 Trifolium pratense HOM05D003681 ORTHO05D004703 1.3e-220 770.4 817 57.4
Os02g0329300 Oryza sativa ssp. japonica HOM05D003681 ORTHO05D004703 1.9e-206 723.4 753 57.4
Gohir.A10G160600 Gossypium hirsutum HOM05D003681 ORTHO05D004703 1.1e-203 714.1 567 69.0
unitig_21.g20482 Utricularia gibba HOM05D003681 ORTHO05D004703 2.4e-201 706.4 768 56.2
Zm00001eb235200 Zea mays HOM05D003681 ORTHO05D004703 6.1e-197 691.8 746 55.1
CDE07G0234 Ceratophyllum demersum HOM05D003681 ORTHO05D004703 6.7e-196 688.3 768 53.8
HPP92_006269 Vanilla planifolia HOM05D003681 ORTHO05D004703 8.2e-194 681.4 749 54.5
TAR374G1355 Trochodendron aralioides HOM05D003681 ORTHO05D004703 4.1e-193 679.1 457 78.3
ATR0824G011 Amborella trichopoda HOM05D003681 ORTHO05D004703 5.5e-190 668.7 744 55.1
unitig_744.g24365 Utricularia gibba HOM05D003681 ORTHO05D004703 2.3e-188 663.3 695 57.3
CDE04G2610 Ceratophyllum demersum HOM05D003681 ORTHO05D004703 3.6e-173 612.8 743 50.7
DCAR_011289 Daucus carota HOM05D003681 ORTHO05D004703 3.1e-164 583.2 586 59.0
QL07p006188 Quercus lobata HOM05D003681 ORTHO05D004703 2.1e-152 543.9 389 74.3
SHI03860 Sapria himalayana HOM05D003681 ORTHO05D004703 9.3e-129 465.3 454 58.8
Mapoly0032s0042 Marchantia polymorpha HOM05D003681 ORTHO05D004703 6.6e-127 459.1 756 46.2
QL09p045970 Quercus lobata HOM05D003681 ORTHO05D004703 2.7e-120 437.2 320 72.2
SMO367G0854 Selaginella moellendorffii HOM05D003681 ORTHO05D004703 4.3e-118 429.9 635 44.3
Pp3c3_25790 Physcomitrium patens HOM05D003681 ORTHO05D004703 4.2e-113 413.3 456 52.0
Pp3c13_14720 Physcomitrium patens HOM05D003681 ORTHO05D004703 3.3e-110 403.7 632 43.0
Pp3c13_14730 Physcomitrium patens HOM05D003681 ORTHO05D004703 3.3e-110 403.7 632 43.0
Pp3c4_18170 Physcomitrium patens HOM05D003681 ORTHO05D004703 1.6e-109 401.4 737 39.5
MELO3C014854.2 Cucumis melo HOM05D003681 ORTHO05D004703 3.9e-95 353.6 435 50.8
SGA_v2.0_scaffold135G34947 Striga asiatica HOM05D003681 ORTHO05D004703 1.1e-94 352.1 256 74.2
SEGI_13919 Sequoiadendron giganteum HOM05D003681 ORTHO05D004703 4.8e-93 346.7 347 57.1
Actinidia35791 Actinidia chinensis HOM05D003681 ORTHO05D004703 5.5e-89 333.2 329 62.0
CBR_g66670 Chara braunii HOM05D003681 ORTHO05D004703 1.2e-88 332.0 486 42.6
Nn3g16565 Nelumbo nucifera HOM05D003681 ORTHO05D004703 9.1e-76 289.3 200 77.5
RcHm_v2.0_Chr2g0109021 Rosa chinensis HOM05D002608 ORTHO05D004703 7.2e-73 279.6 271 57.9
MBI06_g35146_MAGBIO Magnolia biondii HOM05D003681 ORTHO05D004703 1.7e-61 241.9 348 48.0
AagrBONN_evm.TU.Sc2ySwM_228.437 Anthoceros agrestis HOM05D003681 ORTHO05D004703 6.3e-61 240.0 306 45.4
SMO367G0212 Selaginella moellendorffii HOM05D003681 ORTHO05D004703 2.6e-54 218.0 587 33.0
TAR629G3339 Trochodendron aralioides HOM05D003681 ORTHO05D030546 6.1e-48 196.8 653 28.6
RcHm_v2.0_Chr5g0047251 Rosa chinensis HOM05D002608 ORTHO05D021346 8.9e-47 193.0 438 36.1
SMO367G0417 Selaginella moellendorffii HOM05D003681 ORTHO05D004703 1.7e-42 178.7 586 31.4
Lsat_1_v5_gn_3_79520 Lactuca sativa HOM05D003681 ORTHO05D004703 1.9e-41 175.3 196 55.6
SMO275G0043 Selaginella moellendorffii HOM05D003681 ORTHO05D030546 3.9e-34 151.0 131 62.6
DCAR_011288 Daucus carota HOM05D003681 ORTHO05D004703 2.5e-33 148.3 155 55.5
RcHm_v2.0_Chr5g0045391 Rosa chinensis HOM05D003681 ORTHO05D004703 1.5e-30 139.0 96 70.8
RcHm_v2.0_Chr2g0096321 Rosa chinensis HOM05D003681 ORTHO05D004703 2.0e-30 138.7 96 70.8
vmacro18312 Vaccinium macrocarpon HOM05D004367 ORTHO05D004937 3.4e-30 137.9 155 48.4
BcaC05g26953 Brassica carinata HOM05D003681 ORTHO05D024003 4.4e-30 137.5 72 88.9
C05p28020 Brassica napus HOM05D003681 ORTHO05D024003 4.4e-30 137.5 72 88.9
RcHm_v2.0_Chr2g0166591 Rosa chinensis HOM05D003681 ORTHO05D004703 1.7e-29 135.6 76 90.8
Hma1.2p1_0026F.1_g016370 Hydrangea macrophylla HOM05D003681 ORTHO05D004703 8.3e-29 133.3 204 44.6
RcHm_v2.0_Chr6g0248701 Rosa chinensis HOM05D002608 ORTHO05D013040 8.3e-29 133.3 80 78.8
BolC5t31529H Brassica oleracea HOM05D003681 ORTHO05D024003 7.1e-28 130.2 72 87.5
SHI03859 Sapria himalayana HOM05D000105 ORTHO05D000023 1.9e-20 105.5 363 28.4
RcHm_v2.0_Chr6g0248711 Rosa chinensis HOM05D003681 ORTHO05D030546 1.6e-19 102.4 51 94.1
MBI02_g11376_MAGBIO Magnolia biondii HOM05D003681 ORTHO05D024003 3.0e-18 98.2 60 75.0
Lsat_1_v5_gn_2_93681 Lactuca sativa HOM05D006130 ORTHO05D007491 3.3e-17 94.7 50 92.0
Hma1.2p1_0006F.1_g004670 Hydrangea macrophylla HOM05D003681 ORTHO05D004703 9.6e-17 93.2 243 33.7
SEGI_03694 Sequoiadendron giganteum HOM05D003681 ORTHO05D024003 1.4e-15 89.4 60 66.7
SMO275G0001 Selaginella moellendorffii HOM05D003681 ORTHO05D004703 1.9e-12 79.0 84 54.8
ECA247G3396 Erigeron canadensis HOM05D003681 ORTHO05D004703 2.4e-12 78.6 58 63.8
SMO367G0834 Selaginella moellendorffii HOM05D003681 ORTHO05D030546 6.0e-11 73.9 85 49.4
SEGI_23209 Sequoiadendron giganteum HOM05D003681 ORTHO05D004703 6.0e-11 73.9 229 34.1
CAN.G713.20 Capsicum annuum HOM05D000718 ORTHO05D007431 5.8e-06 57.4 86 40.7


User provided reference genes

Program Settings