Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu050427.1 Olea europaea HOM05D005231 ORTHO05D006387 1.7e-269 932.2 490 100.0
Cc07_g00560 Coffea canephora HOM05D005231 ORTHO05D006387 7.3e-233 810.4 480 87.9
Lj7A607T31 Lonicera japonica HOM05D005231 ORTHO05D006387 5.2e-231 804.3 481 85.9
Migut.K01445 Erythranthe guttata HOM05D005231 ORTHO05D006387 1.3e-229 799.7 483 85.5
MSTRG.3095 Avicennia marina HOM05D005231 ORTHO05D006387 1.4e-228 796.2 484 85.3
Hma1.2p1_0571F.1_g180760 Hydrangea macrophylla HOM05D005231 ORTHO05D006387 7.8e-227 790.4 477 85.7
Dinv25680 Davidia involucrata HOM05D005231 ORTHO05D006387 5.1e-226 787.7 481 86.1
Solyc11g068640.2 Solanum lycopersicum HOM05D005231 ORTHO05D006387 1.1e-223 780.0 480 83.3
Sopen11g027360 Solanum pennellii HOM05D005231 ORTHO05D006387 1.1e-223 780.0 480 83.3
CAN.G745.7 Capsicum annuum HOM05D005231 ORTHO05D006387 2.4e-223 778.9 479 85.0
Prupe.5G183000 Prunus persica HOM05D005231 ORTHO05D006387 3.1e-223 778.5 488 84.2
Haze_14831 Corylus avellana HOM05D005231 ORTHO05D006387 5.2e-223 777.7 483 84.5
Nitab4.5_0006008g0040 Nicotiana tabacum HOM05D005231 ORTHO05D006387 5.2e-223 777.7 479 83.7
QL02p072461 Quercus lobata HOM05D005231 ORTHO05D006387 6.8e-223 777.3 480 84.2
MD06G1184100 Malus domestica HOM05D005231 ORTHO05D006387 1.2e-222 776.5 487 84.4
unitig_21.g20479 Utricularia gibba HOM05D005231 ORTHO05D006387 2.6e-222 775.4 476 79.6
Actinidia30894 Actinidia chinensis HOM05D005231 ORTHO05D006387 3.4e-222 775.0 483 84.7
CANSAT64G0673 Cannabis sativa HOM05D005231 ORTHO05D006387 9.9e-222 773.5 488 83.8
Nitab4.5_0000731g0120 Nicotiana tabacum HOM05D005231 ORTHO05D006387 1.3e-221 773.1 480 82.9
CiPaw.03G052100 Carya illinoinensis HOM05D005231 ORTHO05D006387 2.9e-221 771.9 483 83.0
Glyma.19G086600 Glycine max HOM05D005231 ORTHO05D006387 2.9e-221 771.9 476 83.8
Ca_26723_v3 Cicer arietinum L. HOM05D005231 ORTHO05D006387 3.8e-221 771.5 476 79.4
GSVIVG01001825001 Vitis vinifera HOM05D005231 ORTHO05D006387 3.8e-221 771.5 468 86.3
Cfa007256 Carpinus fangiana HOM05D005231 ORTHO05D006387 4.9e-221 771.2 482 84.2
Rhsim08G0045200 Rhododendron simsii HOM05D005231 ORTHO05D006387 8.4e-221 770.4 478 85.4
Thecc.04G029800 Theobroma cacao HOM05D005231 ORTHO05D006387 8.4e-221 770.4 477 83.0
TAR371G0773 Trochodendron aralioides HOM05D005231 ORTHO05D006387 1.1e-220 770.0 488 83.2
Psat3g170000 Pisum sativum HOM05D005231 ORTHO05D006387 1.9e-220 769.2 466 83.7
DCAR_021762 Daucus carota HOM05D005231 ORTHO05D006387 3.2e-220 768.5 479 82.7
VMungo1215G0650 Vigna mungo HOM05D005231 ORTHO05D006387 3.2e-220 768.5 476 81.1
TPR.G38280 Trifolium pratense HOM05D005231 ORTHO05D006387 7.1e-220 767.3 466 83.0
Phvul.001G096100 Phaseolus vulgaris HOM05D005231 ORTHO05D006387 9.2e-220 766.9 476 79.6
CiPaw.04G034400 Carya illinoinensis HOM05D005231 ORTHO05D006387 1.2e-219 766.5 484 84.1
Lj1g0000655 Lotus japonicus HOM05D005231 ORTHO05D006387 1.6e-219 766.1 476 83.0
Atru.chr6.2511 Acer truncatum HOM05D005231 ORTHO05D006387 2.1e-219 765.8 480 82.1
Medtr7g031450 Medicago truncatula HOM05D005231 ORTHO05D006387 2.1e-219 765.8 466 83.9
Manes.17G106200 Manihot esculenta HOM05D005231 ORTHO05D006387 6.0e-219 764.2 477 80.3
Eucgr.I01665 Eucalyptus grandis HOM05D005231 ORTHO05D006387 7.8e-219 763.8 487 82.8
Lalb_Chr14g0363091 Lupinus albus HOM05D005231 ORTHO05D006387 1.0e-218 763.5 475 82.5
RcHm_v2.0_Chr7g0180111 Rosa chinensis HOM05D005231 ORTHO05D006387 1.7e-218 762.7 486 83.1
COL.COLO4_08767 Corchorus olitorius HOM05D005231 ORTHO05D006387 3.9e-218 761.5 479 82.9
Glyma.16G060500 Glycine max HOM05D005231 ORTHO05D006387 6.6e-218 760.8 465 84.5
Peaxi162Scf00224g00118 Petunia axillaris HOM05D005231 ORTHO05D006387 1.1e-217 760.0 525 75.6
Gorai.006G039900 Gossypium raimondii HOM05D005231 ORTHO05D006387 1.5e-217 759.6 482 81.7
Duzib264G1000 Durio zibethinus HOM05D005231 ORTHO05D006387 1.9e-217 759.2 481 82.1
arahy.Tifrunner.gnm1.ann1.L2Q6WP Arachis hypogaea HOM05D005231 ORTHO05D006387 2.5e-217 758.8 476 81.7
ECA238G4317 Erigeron canadensis HOM05D005231 ORTHO05D006387 2.5e-217 758.8 479 81.0
SalBow1G7136 Salvia bowleyana HOM05D005231 ORTHO05D006387 3.3e-217 758.4 476 78.6
arahy.Tifrunner.gnm1.ann1.M0JNNK Arachis hypogaea HOM05D005231 ORTHO05D006387 5.6e-217 757.7 476 81.5
Duzib147G1087 Durio zibethinus HOM05D005231 ORTHO05D006387 1.3e-216 756.5 479 83.1
ClCG05G007180 Citrullus lanatus HOM05D005231 ORTHO05D006387 2.8e-216 755.4 479 81.0
Gohir.D09G035000 Gossypium hirsutum HOM05D005231 ORTHO05D006387 2.8e-216 755.4 480 81.2
TWI36G1540 Tripterygium wilfordii HOM05D005231 ORTHO05D006387 3.6e-216 755.0 488 80.9
FvH4_5g15940 Fragaria vesca HOM05D005231 ORTHO05D006387 6.2e-216 754.2 486 82.5
FAN18G1846 Fragaria x ananassa HOM05D005231 ORTHO05D006387 6.2e-216 754.2 486 82.5
HanXRQChr14g0450911 Helianthus annuus HOM05D005231 ORTHO05D006387 6.2e-216 754.2 476 82.4
Gohir.A09G034100 Gossypium hirsutum HOM05D005231 ORTHO05D006387 2.4e-215 752.3 482 81.5
TWI12G0663 Tripterygium wilfordii HOM05D005231 ORTHO05D006387 2.4e-215 752.3 490 81.8
Ciclev10014086m.g Citrus clementina HOM05D005231 ORTHO05D006387 3.1e-215 751.9 479 82.5
FAN08G2159 Fragaria x ananassa HOM05D005231 ORTHO05D006387 4.0e-215 751.5 484 82.2
FAN04G1242 Fragaria x ananassa HOM05D005231 ORTHO05D006387 6.9e-215 750.7 486 81.9
CsaV3_3G015940 Cucumis sativus L. HOM05D005231 ORTHO05D006387 5.8e-214 747.7 480 79.6
Aqoxy5G03496 Aquilegia oxysepala HOM05D005231 ORTHO05D006387 1.3e-213 746.5 489 80.0
Lsat_1_v5_gn_2_93920 Lactuca sativa HOM05D005231 ORTHO05D006387 8.4e-213 743.8 481 81.7
Sed0020589 Sechium edule HOM05D005231 ORTHO05D006387 1.1e-212 743.4 480 81.5
PGR142G3743 Punica granatum HOM05D005231 ORTHO05D006387 5.4e-212 741.1 506 76.7
Sabra16G0215400 Salix brachista HOM05D005231 ORTHO05D006387 1.2e-211 740.0 483 79.3
Dinv33367 Davidia involucrata HOM05D005231 ORTHO05D006387 1.3e-210 736.5 437 88.6
Aa31LG5G10910 Aethionema arabicum HOM05D005231 ORTHO05D006387 5.1e-210 734.6 487 80.9
SGA_v2.0_scaffold47G17578 Striga asiatica HOM05D005231 ORTHO05D006387 5.1e-210 734.6 406 87.7
Potri.001G334300 Populus trichocarpa HOM05D005231 ORTHO05D006387 8.7e-210 733.8 483 80.5
CSS0002510 Camellia sinensis var. sinensis HOM05D005231 ORTHO05D006387 1.1e-209 733.4 464 85.8
Sc03g0006820 Simmondsia chinensis HOM05D005231 ORTHO05D006387 1.9e-209 732.6 490 78.8
PSO782G5010 Papaver somniferum HOM05D005231 ORTHO05D006387 2.5e-209 732.3 489 76.9
Nn4g22395 Nelumbo nucifera HOM05D005231 ORTHO05D006387 9.6e-209 730.3 406 85.7
Nn2g10551 Nelumbo nucifera HOM05D005231 ORTHO05D006387 1.3e-208 729.9 477 79.0
PSO063G5961 Papaver somniferum HOM05D005231 ORTHO05D006387 2.1e-208 729.2 489 78.9
Hund15390 Selenicereus undatus HOM05D005231 ORTHO05D006387 1.1e-207 726.9 483 77.8
Ah.01g004700 Amaranthus hybridus HOM05D005231 ORTHO05D006387 1.4e-207 726.5 473 81.4
Thhalv10019930m.g Eutrema salsugineum HOM05D005231 ORTHO05D006387 1.2e-206 723.4 491 80.0
Sp3g00280 Schrenkiella parvula HOM05D005231 ORTHO05D006387 7.6e-206 720.7 487 80.3
Carub.0003s0028 Capsella rubella HOM05D005231 ORTHO05D006387 9.9e-206 720.3 486 80.0
A02p30380 Brassica napus HOM05D005231 ORTHO05D006387 1.7e-205 719.5 486 79.4
EL10Ac6g14067 Beta vulgaris HOM05D005231 ORTHO05D006387 3.8e-205 718.4 488 76.6
C02p47900 Brassica napus HOM05D005231 ORTHO05D006387 3.8e-205 718.4 490 79.4
BolC2t10823H Brassica oleracea HOM05D005231 ORTHO05D006387 3.8e-205 718.4 490 79.4
AT3G01780 Arabidopsis thaliana HOM05D005231 ORTHO05D006387 8.4e-205 717.2 494 78.9
AL3G10350 Arabidopsis lyrata HOM05D005231 ORTHO05D006387 1.1e-204 716.8 494 78.9
MELO3C006791.2 Cucumis melo HOM05D005231 ORTHO05D006387 3.2e-204 715.3 495 77.0
BraA02t08053Z Brassica rapa HOM05D005231 ORTHO05D006387 9.3e-204 713.8 486 79.0
THA.LOC104822412 Tarenaya hassleriana HOM05D005231 ORTHO05D006387 9.3e-204 713.8 486 78.8
CARHR075150 Cardamine hirsuta HOM05D005231 ORTHO05D006387 1.3e-202 709.9 505 76.8
CDE07G1517 Ceratophyllum demersum HOM05D005231 ORTHO05D006387 3.0e-202 708.8 469 79.7
Os02g0793100 Oryza sativa ssp. japonica HOM05D005231 ORTHO05D006387 9.0e-199 697.2 463 75.6
ATR0693G284 Amborella trichopoda HOM05D005231 ORTHO05D006387 4.5e-198 694.9 475 76.8
Zm00001eb201030 Zea mays HOM05D005231 ORTHO05D006387 2.9e-197 692.2 474 74.1
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 2.5e-196 689.1 490 73.5
Os11g0175900 Oryza sativa ssp. japonica HOM05D005231 ORTHO05D006387 2.5e-196 689.1 473 74.2
BcaC03g16893 Brassica carinata HOM05D005231 ORTHO05D006387 2.1e-195 686.0 406 81.8
FAN13G1708 Fragaria x ananassa HOM05D005231 ORTHO05D006387 2.1e-195 686.0 510 74.1
AUR62038505 Chenopodium quinoa HOM05D005231 ORTHO05D006387 5.1e-194 681.4 395 82.3
SHI03892 Sapria himalayana HOM05D005231 ORTHO05D006387 1.3e-189 666.8 485 67.6
SEGI_09869 Sequoiadendron giganteum HOM05D005231 ORTHO05D006387 6.3e-184 647.9 477 70.4
vmacro18325 Vaccinium macrocarpon HOM05D005231 ORTHO05D006387 8.2e-184 647.5 603 62.4
AUR62014230 Chenopodium quinoa HOM05D005231 ORTHO05D006387 5.7e-177 624.8 369 80.8
SMO143G0109 Selaginella moellendorffii HOM05D005231 ORTHO05D006387 6.1e-147 525.0 466 54.9
Aqoxy5G03474 Aquilegia oxysepala HOM05D005231 ORTHO05D006387 4.4e-145 518.8 352 80.7
Pp3c14_16610 Physcomitrium patens HOM05D005231 ORTHO05D006387 2.0e-142 510.0 470 57.0
Pp3c2_2820 Physcomitrium patens HOM05D005231 ORTHO05D006387 2.3e-141 506.5 477 55.1
BcaB01g00417 Brassica carinata HOM05D005231 ORTHO05D006387 2.5e-140 503.1 295 81.0
Pp3c10_18980 Physcomitrium patens HOM05D005231 ORTHO05D006387 1.0e-138 497.7 470 56.8
Mapoly0078s0040 Marchantia polymorpha HOM05D005231 ORTHO05D006387 6.8e-138 495.0 464 56.0
AagrBONN_evm.TU.Sc2ySwM_344.3213 Anthoceros agrestis HOM05D005231 ORTHO05D006387 1.7e-136 490.3 462 53.7
Zm00001eb091580 Zea mays HOM05D005231 ORTHO05D006387 8.4e-112 408.3 273 74.7
Cpa.g.sc130.10 Carica papaya HOM05D005231 ORTHO05D006387 2.5e-108 396.7 467 54.6
CBR_g21747 Chara braunii HOM05D005231 ORTHO05D006387 6.0e-102 375.6 461 43.2
AUR62014240 Chenopodium quinoa HOM05D005231 ORTHO05D006387 9.6e-76 288.5 167 80.8
MD14G1190000 Malus domestica HOM05D005231 ORTHO05D006387 7.2e-71 272.3 163 79.1
Manes.15G157900 Manihot esculenta HOM05D005231 ORTHO05D006387 1.0e-64 251.9 154 78.6
Zm00001eb091570 Zea mays HOM05D005231 ORTHO05D006387 7.2e-55 219.2 155 68.4
MBI11_g15863_MAGBIO Magnolia biondii HOM05D005231 ORTHO05D006387 2.7e-46 190.7 113 75.2
HPP92_011387 Vanilla planifolia HOM05D005231 ORTHO05D006387 3.7e-43 180.3 112 73.2
BraA03t12406Z Brassica rapa HOM05D002210 ORTHO05D002304 9.8e-36 155.6 78 94.9
C03p39410 Brassica napus HOM05D005231 ORTHO05D006387 9.5e-15 85.9 94 73.4
MCO15G368 Micromonas commoda HOM05D005231 ORTHO05D006387 1.3e-08 65.5 344 25.3


User provided reference genes

Program Settings