Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu050407.1 Olea europaea HOM05D012176 ORTHO05D014468 1.2e-138 496.5 252 100.0
Oeu055534.1 Olea europaea HOM05D012176 ORTHO05D014468 2.7e-74 282.7 185 77.8
SGA_v2.0_scaffold31G12844 Striga asiatica HOM05D012176 ORTHO05D014468 4.9e-31 139.0 241 35.7
Migut.J00709 Erythranthe guttata HOM05D012176 ORTHO05D002052 2.7e-29 133.3 284 32.4
MSTRG.5900 Avicennia marina HOM05D012176 ORTHO05D014468 1.5e-27 127.5 259 32.0
Nitab4.5_0000020g0110 Nicotiana tabacum HOM05D012176 ORTHO05D014468 1.8e-25 120.6 249 28.5
Nitab4.5_0002958g0020 Nicotiana tabacum HOM05D012176 ORTHO05D014468 1.2e-24 117.9 265 28.7
Rhsim03G0065900 Rhododendron simsii HOM05D008136 ORTHO05D002052 2.6e-24 116.7 243 29.6
Actinidia32046 Actinidia chinensis HOM05D000182 ORTHO05D000112 6.6e-20 102.1 196 33.2
MSTRG.19312 Avicennia marina HOM05D012176 ORTHO05D014468 1.5e-19 100.9 197 27.4
QL07p036916 Quercus lobata HOM05D008136 ORTHO05D002052 1.9e-19 100.5 251 29.1
Potri.006G204000 Populus trichocarpa HOM05D008136 ORTHO05D002052 2.5e-19 100.1 196 30.6
Manes.08G032700 Manihot esculenta HOM05D008136 ORTHO05D002052 7.3e-19 98.6 251 31.9
Oeu052622.2 Olea europaea HOM05D022101 ORTHO05D022209 1.6e-18 97.4 252 29.4
Eucgr.A02595 Eucalyptus grandis HOM05D008136 ORTHO05D002052 6.2e-18 95.5 243 27.6
Migut.B00865 Erythranthe guttata HOM05D012176 ORTHO05D014468 1.4e-17 94.4 186 32.3
Duzib106G1810 Durio zibethinus HOM05D008136 ORTHO05D002052 8.9e-17 91.7 256 26.6
PGSC0003DMG400016421 Solanum tuberosum HOM05D012176 ORTHO05D014468 1.5e-16 90.9 248 25.4
Cc06_g06470 Coffea canephora HOM05D022101 ORTHO05D022209 3.4e-16 89.7 247 29.1
Thecc.05G103000 Theobroma cacao HOM05D008136 ORTHO05D002052 4.4e-16 89.4 239 28.5
Sabra06G0157200 Salix brachista HOM05D008136 ORTHO05D002052 5.8e-16 89.0 161 33.5
Duzib093G0447 Durio zibethinus HOM05D008136 ORTHO05D002052 1.3e-15 87.8 246 27.2
BcaC06g32916 Brassica carinata HOM05D008136 ORTHO05D002052 3.7e-15 86.3 259 27.8
CARHR162230 Cardamine hirsuta HOM05D008136 ORTHO05D002052 6.4e-15 85.5 238 26.9
COL.COLO4_29586 Corchorus olitorius HOM05D008136 ORTHO05D002052 3.2e-14 83.2 232 27.6
Dinv31752 Davidia involucrata HOM05D002687 ORTHO05D022209 4.1e-14 82.8 202 28.2
TWI74G0144 Tripterygium wilfordii HOM05D008136 ORTHO05D002052 5.4e-14 82.4 193 27.5
AT3G52460 Arabidopsis thaliana HOM05D008136 ORTHO05D002052 9.2e-14 81.6 259 27.0
TAR633G0472 Trochodendron aralioides HOM05D002687 ORTHO05D002052 1.2e-13 81.3 231 29.9
Ciclev10029176m.g Citrus clementina HOM05D002687 ORTHO05D002052 4.6e-13 79.3 238 27.7
BcaB01g00366 Brassica carinata HOM05D008136 ORTHO05D002052 3.0e-12 76.6 259 27.0
Ciclev10013330m.g Citrus clementina HOM05D015120 ORTHO05D010666 3.0e-12 76.6 201 30.8
DCAR_003063 Daucus carota HOM05D008136 ORTHO05D014468 1.1e-11 74.7 263 24.3
Manes.11G165500 Manihot esculenta HOM05D002687 ORTHO05D002052 4.3e-11 72.8 230 27.4
BcaC06g33391 Brassica carinata HOM05D008136 ORTHO05D002052 7.3e-11 72.0 194 26.3
A03p48880 Brassica napus HOM05D008136 ORTHO05D002052 7.3e-11 72.0 262 24.8
C07p46980 Brassica napus HOM05D008136 ORTHO05D002052 7.3e-11 72.0 194 26.3
BolC7t45215H Brassica oleracea HOM05D008136 ORTHO05D002052 7.3e-11 72.0 194 26.3
BraA03t13990Z Brassica rapa HOM05D008136 ORTHO05D002052 1.2e-10 71.2 262 24.4
CiPaw.09G020400 Carya illinoinensis HOM05D008136 ORTHO05D002052 2.1e-10 70.5 258 27.1
CANSAT64G0025 Cannabis sativa HOM05D008136 ORTHO05D002052 2.8e-10 70.1 148 29.1
HanXRQChr13g0420231 Helianthus annuus HOM05D002687 ORTHO05D002052 8.1e-10 68.6 191 28.3
FAN14G1910 Fragaria x ananassa HOM05D010052 ORTHO05D010666 1.4e-09 67.8 167 28.1
Lsat_1_v5_gn_2_38441 Lactuca sativa HOM05D002687 ORTHO05D002052 1.4e-09 67.8 160 28.1
Sc21g0006860 Simmondsia chinensis HOM05D002687 ORTHO05D002052 2.3e-09 67.0 257 26.8
Sabra16G0125800 Salix brachista HOM05D002687 ORTHO05D002052 3.1e-09 66.6 234 26.5
TAR633G1301 Trochodendron aralioides HOM05D002687 ORTHO05D002052 3.1e-09 66.6 236 26.3
ECA238G0184 Erigeron canadensis HOM05D002687 ORTHO05D002052 4.0e-09 66.2 253 27.3
FAN05G5202 Fragaria x ananassa HOM05D009874 ORTHO05D010825 4.0e-09 66.2 154 30.5
COL.COLO4_32398 Corchorus olitorius HOM05D010991 ORTHO05D010825 6.8e-09 65.5 154 28.6
Glyma.10G080800 Glycine max HOM05D008136 ORTHO05D002052 6.8e-09 65.5 219 25.6
Lsat_1_v5_gn_3_114060 Lactuca sativa HOM05D002687 ORTHO05D002052 6.8e-09 65.5 231 25.1
Oeu009048.1 Olea europaea HOM05D002687 ORTHO05D002052 6.8e-09 65.5 254 27.6
Potri.001G218300 Populus trichocarpa HOM05D002687 ORTHO05D002052 8.9e-09 65.1 230 23.9
Thecc.09G275200 Theobroma cacao HOM05D002687 ORTHO05D002052 8.9e-09 65.1 158 32.3
FvH4_6g20210 Fragaria vesca HOM05D009874 ORTHO05D010825 1.2e-08 64.7 147 29.9
FAN14G2012 Fragaria x ananassa HOM05D009874 ORTHO05D010825 1.2e-08 64.7 147 29.9
RcHm_v2.0_Chr3g0475751 Rosa chinensis HOM05D009874 ORTHO05D010825 1.2e-08 64.7 149 30.2
Cpa.g.sc1142.1 Carica papaya HOM05D002687 ORTHO05D002052 1.5e-08 64.3 157 29.9
Haze_08138 Corylus avellana HOM05D009874 ORTHO05D010825 2.0e-08 63.9 149 26.8
FAN04G3011 Fragaria x ananassa HOM05D010052 ORTHO05D010666 2.0e-08 63.9 162 27.2
FAN05G0496 Fragaria x ananassa HOM05D009874 ORTHO05D010825 2.0e-08 63.9 147 29.9
Gohir.D09G097800 Gossypium hirsutum HOM05D002687 ORTHO05D002052 2.0e-08 63.9 159 28.9
Gorai.006G114600 Gossypium raimondii HOM05D002687 ORTHO05D002052 2.0e-08 63.9 159 28.9
Nn2g14283 Nelumbo nucifera HOM05D002687 ORTHO05D002052 2.0e-08 63.9 246 24.0
RcHm_v2.0_Chr7g0211331 Rosa chinensis HOM05D010052 ORTHO05D010666 2.0e-08 63.9 162 27.8
PSO339G2661 Papaver somniferum HOM05D002687 ORTHO05D002052 2.6e-08 63.5 241 25.3
Ca_09051_v3 Cicer arietinum L. HOM05D008136 ORTHO05D002052 3.4e-08 63.2 155 31.6
PSO384G1068 Papaver somniferum HOM05D002687 ORTHO05D002052 3.4e-08 63.2 240 25.0
Sopen01g003200 Solanum pennellii HOM05D022101 ORTHO05D022209 3.4e-08 63.2 197 24.9
Cpa.g.sc104.41 Carica papaya HOM05D015120 ORTHO05D010825 4.4e-08 62.8 162 29.0
Prupe.7G096300 Prunus persica HOM05D010052 ORTHO05D010666 4.4e-08 62.8 201 25.9
TAR633G0261 Trochodendron aralioides HOM05D002687 ORTHO05D002052 4.4e-08 62.8 234 24.4
Nitab4.5_0000893g0110 Nicotiana tabacum HOM05D002687 ORTHO05D002052 5.8e-08 62.4 157 26.1
Atru.chr8.1376 Acer truncatum HOM05D015120 ORTHO05D010666 7.6e-08 62.0 160 28.1
FAN18G3409 Fragaria x ananassa HOM05D010052 ORTHO05D010666 9.9e-08 61.6 165 26.1
Prupe.7G096800 Prunus persica HOM05D009874 ORTHO05D010825 9.9e-08 61.6 157 27.4
MD03G1153500 Malus domestica HOM05D002687 ORTHO05D002052 1.3e-07 61.2 233 26.6
Nitab4.5_0000158g0010 Nicotiana tabacum HOM05D002687 ORTHO05D002052 1.3e-07 61.2 157 25.5
Thecc.01G085100 Theobroma cacao HOM05D015120 ORTHO05D010666 1.3e-07 61.2 179 26.8
Duzib170G0577 Durio zibethinus HOM05D002687 ORTHO05D002052 2.2e-07 60.5 203 26.6
FvH4_5g22901 Fragaria vesca HOM05D010052 ORTHO05D010666 2.2e-07 60.5 162 25.9
FvH4_6g20177 Fragaria vesca HOM05D002687 ORTHO05D002052 2.2e-07 60.5 158 27.8
FAN14G3199 Fragaria x ananassa HOM05D029328 ORTHO05D002052 2.2e-07 60.5 158 27.8
Sopen11g027610 Solanum pennellii HOM05D002687 ORTHO05D002052 2.2e-07 60.5 234 26.1
CSS0030865 Camellia sinensis var. sinensis HOM05D002687 ORTHO05D002052 2.9e-07 60.1 245 24.1
CSS0032031 Camellia sinensis var. sinensis HOM05D002687 ORTHO05D002052 2.9e-07 60.1 245 24.1
MD12G1039000 Malus domestica HOM05D009874 ORTHO05D010825 2.9e-07 60.1 167 28.1
Prupe.7G096700 Prunus persica HOM05D010052 ORTHO05D010666 2.9e-07 60.1 165 26.7
VMungo0720G1813 Vigna mungo HOM05D013176 ORTHO05D010666 2.9e-07 60.1 158 22.8
QL01p011302 Quercus lobata HOM05D002687 ORTHO05D002052 3.7e-07 59.7 254 22.8
PGSC0003DMG400019632 Solanum tuberosum HOM05D002687 ORTHO05D002052 3.7e-07 59.7 234 24.8
MD00G1129000 Malus domestica HOM05D002687 ORTHO05D002052 6.4e-07 58.9 236 25.4
RcHm_v2.0_Chr3g0475711 Rosa chinensis HOM05D002687 ORTHO05D002052 6.4e-07 58.9 245 25.7
DCAR_010643 Daucus carota HOM05D002687 ORTHO05D002052 1.1e-06 58.2 236 24.2
Dinv31534 Davidia involucrata HOM05D002687 ORTHO05D002052 1.1e-06 58.2 161 29.8
Gohir.A07G112600 Gossypium hirsutum HOM05D002687 ORTHO05D002052 1.1e-06 58.2 158 27.2
Gohir.D07G116000 Gossypium hirsutum HOM05D002687 ORTHO05D002052 1.4e-06 57.8 156 26.3
A07p18100 Brassica napus HOM05D002687 ORTHO05D002052 1.9e-06 57.4 220 24.1
BraA07t29528Z Brassica rapa HOM05D002687 ORTHO05D002052 1.9e-06 57.4 220 24.1
Cfa012524 Carpinus fangiana HOM05D009874 ORTHO05D010825 1.9e-06 57.4 150 25.3
Gorai.001G124500 Gossypium raimondii HOM05D002687 ORTHO05D002052 2.4e-06 57.0 156 26.3
Medtr7g106130 Medicago truncatula HOM05D008136 ORTHO05D002052 2.4e-06 57.0 249 26.9
FAN13G1417 Fragaria x ananassa HOM05D010052 ORTHO05D010666 3.2e-06 56.6 153 24.8
Lj1g0025222 Lotus japonicus HOM05D008136 ORTHO05D002052 3.2e-06 56.6 257 24.1
Phvul.007G268400 Phaseolus vulgaris HOM05D008136 ORTHO05D002052 3.2e-06 56.6 256 25.0
QL07p036935 Quercus lobata HOM05D002687 ORTHO05D002052 3.2e-06 56.6 143 28.0
FvH4_3g40821 Fragaria vesca HOM05D010052 ORTHO05D010666 4.1e-06 56.2 162 29.0
FAN11G3829 Fragaria x ananassa HOM05D010052 ORTHO05D010666 4.1e-06 56.2 162 29.0
Medtr4g051652 Medicago truncatula HOM05D002687 ORTHO05D002052 4.1e-06 56.2 183 24.0
PGR142G0074 Punica granatum HOM05D008136 ORTHO05D002052 4.1e-06 56.2 170 25.3
Solyc11g068900.1 Solanum lycopersicum HOM05D002687 ORTHO05D002052 4.1e-06 56.2 234 25.6
TAR636G1837 Trochodendron aralioides HOM05D002687 ORTHO05D002052 4.1e-06 56.2 163 23.9
CAN.G1463.1 Capsicum annuum HOM05D002687 ORTHO05D002065 5.4e-06 55.8 142 26.1
Cpa.g.sc129.12 Carica papaya HOM05D015120 ORTHO05D010666 5.4e-06 55.8 156 25.6
Lj1C262G4 Lonicera japonica HOM05D002687 ORTHO05D002052 5.4e-06 55.8 147 27.2
BolC4t23929H Brassica oleracea HOM05D002687 ORTHO05D002052 7.1e-06 55.5 190 25.3
Cfa012525 Carpinus fangiana HOM05D009874 ORTHO05D010825 7.1e-06 55.5 162 25.9
A03p26690 Brassica napus HOM05D002687 ORTHO05D002052 9.2e-06 55.1 231 23.8
COL.COLO4_22662 Corchorus olitorius HOM05D002687 ORTHO05D002052 9.2e-06 55.1 202 25.2
HanXRQChr12g0382031 Helianthus annuus HOM05D002687 ORTHO05D002052 9.2e-06 55.1 231 25.5
Hma1.2p1_0097F.1_g048090 Hydrangea macrophylla HOM05D002687 ORTHO05D002052 9.2e-06 55.1 232 24.1
TAR636G0890 Trochodendron aralioides HOM05D002687 ORTHO05D002052 9.2e-06 55.1 141 24.8


User provided reference genes

Program Settings