Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu050378.1 Olea europaea HOM05D004795 ORTHO05D005518 1.4e-116 422.9 216 100.0
Oeu016627.1 Olea europaea HOM05D004795 ORTHO05D005518 9.4e-92 340.5 216 83.8
Nitab4.5_0000912g0060 Nicotiana tabacum HOM05D004795 ORTHO05D005518 3.6e-59 232.3 217 62.7
Oeu039734.1 Olea europaea HOM05D004795 ORTHO05D005518 4.7e-59 231.9 227 59.9
MSTRG.3555 Avicennia marina HOM05D004795 ORTHO05D005518 1.4e-55 220.3 230 58.3
Cc07_g08730 Coffea canephora HOM05D004795 ORTHO05D005518 2.4e-55 219.5 226 61.9
CAN.G625.30 Capsicum annuum HOM05D004795 ORTHO05D005518 2.7e-54 216.1 216 60.6
Sopen02g030830 Solanum pennellii HOM05D004795 ORTHO05D005518 1.3e-53 213.8 215 60.0
PGSC0003DMG402026390 Solanum tuberosum HOM05D004795 ORTHO05D005518 5.1e-53 211.8 215 59.1
QL02p051034 Quercus lobata HOM05D004795 ORTHO05D005518 2.9e-48 196.1 228 57.0
QL12p016552 Quercus lobata HOM05D004795 ORTHO05D005518 2.9e-48 196.1 228 57.0
SGA_v2.0_scaffold115G32104 Striga asiatica HOM05D004795 ORTHO05D005518 2.3e-45 186.4 205 57.1
Dinv33956 Davidia involucrata HOM05D001490 ORTHO05D001450 1.9e-44 183.3 207 54.6
Migut.L00330 Erythranthe guttata HOM05D004795 ORTHO05D005518 7.3e-44 181.4 235 51.9
Cfa007915 Carpinus fangiana HOM05D004795 ORTHO05D005518 6.2e-43 178.3 227 54.6
CiPaw.03G062800 Carya illinoinensis HOM05D004795 ORTHO05D005518 1.5e-41 173.7 231 53.2
Rhsim10G0068600 Rhododendron simsii HOM05D004795 ORTHO05D005518 4.4e-41 172.2 233 52.4
DCAR_025909 Daucus carota HOM05D004795 ORTHO05D005518 7.6e-41 171.4 204 54.9
Nitab4.5_0004416g0090 Nicotiana tabacum HOM05D004795 ORTHO05D005518 2.9e-40 169.5 158 64.6
Peaxi162Scf00394g00712 Petunia axillaris HOM05D004795 ORTHO05D005518 3.8e-40 169.1 175 59.4
Lsat_1_v5_gn_4_154580 Lactuca sativa HOM05D004795 ORTHO05D005518 5.4e-39 165.2 213 52.6
Haze_14167 Corylus avellana HOM05D004795 ORTHO05D005518 4.6e-38 162.2 228 52.2
CANSAT78G0274 Cannabis sativa HOM05D004795 ORTHO05D005518 3.0e-37 159.5 232 51.3
CiPaw.04G043000 Carya illinoinensis HOM05D004795 ORTHO05D005518 3.9e-37 159.1 230 50.0
MD17G1245500 Malus domestica HOM05D004795 ORTHO05D005518 1.4e-34 150.6 235 48.1
TAR629G1480 Trochodendron aralioides HOM05D004795 ORTHO05D005518 1.4e-34 150.6 228 45.6
MD09G1253700 Malus domestica HOM05D004795 ORTHO05D005518 1.8e-34 150.2 235 48.9
TWI53G1522 Tripterygium wilfordii HOM05D004795 ORTHO05D005518 3.1e-34 149.4 226 47.3
TWI77G0518 Tripterygium wilfordii HOM05D004795 ORTHO05D005518 9.0e-34 147.9 228 48.2
Manes.02G069600 Manihot esculenta HOM05D004795 ORTHO05D005518 1.2e-33 147.5 225 50.7
Eucgr.J01506 Eucalyptus grandis HOM05D004795 ORTHO05D005518 2.0e-33 146.7 193 51.8
Sabra04G0081300 Salix brachista HOM05D004795 ORTHO05D005518 2.0e-33 146.7 229 48.9
Prupe.3G143600 Prunus persica HOM05D004795 ORTHO05D005518 4.5e-33 145.6 234 49.1
Cpa.g.sc170.57 Carica papaya HOM05D004795 ORTHO05D005518 1.3e-32 144.1 243 46.5
Duzib138G0938 Durio zibethinus HOM05D004795 ORTHO05D005518 2.2e-32 143.3 226 47.3
PGR004G2449 Punica granatum HOM05D004795 ORTHO05D005518 6.4e-32 141.7 227 49.3
Hma1.2p1_1109F.1_g258120 Hydrangea macrophylla HOM05D004795 ORTHO05D005518 8.4e-32 141.4 212 46.7
Atru.chr1.1662 Acer truncatum HOM05D004795 ORTHO05D005518 3.2e-31 139.4 215 49.8
CsaV3_3G020240 Cucumis sativus L. HOM05D004795 ORTHO05D005518 3.2e-31 139.4 209 47.8
Sabra17G0096100 Salix brachista HOM05D004795 ORTHO05D005518 4.2e-31 139.0 249 44.2
COL.COLO4_09348 Corchorus olitorius HOM05D004795 ORTHO05D005518 9.3e-31 137.9 212 47.6
Potri.017G116100 Populus trichocarpa HOM05D004795 ORTHO05D005518 9.3e-31 137.9 249 44.6
ClCG05G012330 Citrullus lanatus HOM05D004795 ORTHO05D005518 3.5e-30 136.0 215 47.0
Thecc.04G132300 Theobroma cacao HOM05D004795 ORTHO05D005518 6.0e-30 135.2 219 45.7
Duzib211G0180 Durio zibethinus HOM05D004795 ORTHO05D005518 1.0e-29 134.4 211 46.0
Manes.01G111300 Manihot esculenta HOM05D004795 ORTHO05D005518 5.1e-29 132.1 208 47.1
Ciclev10012794m.g Citrus clementina HOM05D004795 ORTHO05D005518 6.7e-29 131.7 208 50.0
Duzib133G0847 Durio zibethinus HOM05D004795 ORTHO05D005518 8.7e-29 131.3 208 45.2
Ah.16g101690 Amaranthus hybridus HOM05D004795 ORTHO05D005518 1.1e-28 131.0 211 44.5
TAR622G0902 Trochodendron aralioides HOM05D004795 ORTHO05D005518 3.3e-28 129.4 228 43.9
Gohir.D11G325800 Gossypium hirsutum HOM05D004795 ORTHO05D005518 9.6e-28 127.9 209 43.5
Gohir.D11G325700 Gossypium hirsutum HOM05D004795 ORTHO05D005518 2.8e-27 126.3 193 45.6
TAR371G0696 Trochodendron aralioides HOM05D004795 ORTHO05D005518 1.4e-26 124.0 206 43.2
Sed0015257 Sechium edule HOM05D004795 ORTHO05D005518 1.8e-26 123.6 215 45.6
Gohir.D11G326300 Gossypium hirsutum HOM05D004795 ORTHO05D005518 6.9e-26 121.7 209 44.0
Glyma.13G045200 Glycine max HOM05D004795 ORTHO05D005518 9.0e-26 121.3 233 43.3
MELO3C023735.2 Cucumis melo HOM05D004795 ORTHO05D005518 1.5e-25 120.6 192 46.4
HanXRQChr11g0330661 Helianthus annuus HOM05D004795 ORTHO05D005518 1.5e-25 120.6 165 52.7
Nn3g17899 Nelumbo nucifera HOM05D004795 ORTHO05D005518 4.5e-25 119.0 209 43.1
PGR042G3836 Punica granatum HOM05D004795 ORTHO05D005518 1.3e-24 117.5 199 47.2
Phvul.008G007200 Phaseolus vulgaris HOM05D004795 ORTHO05D005518 2.2e-24 116.7 186 48.9
Glyma.08G366700 Glycine max HOM05D004795 ORTHO05D005518 6.4e-24 115.2 185 48.1
VMungo0464G1679 Vigna mungo HOM05D004795 ORTHO05D005518 8.4e-24 114.8 226 42.9
arahy.Tifrunner.gnm1.ann1.HZ9SBP Arachis hypogaea HOM05D001490 ORTHO05D005518 1.1e-23 114.4 238 41.6
VMungo1383G1737 Vigna mungo HOM05D004795 ORTHO05D005518 4.6e-22 109.0 190 45.3
Glyma.19G049900 Glycine max HOM05D004795 ORTHO05D005518 1.3e-21 107.5 223 39.9
Sc11g0008370 Simmondsia chinensis HOM05D004795 ORTHO05D005518 1.8e-21 107.1 179 46.9
Solyc02g086140.2 Solanum lycopersicum HOM05D004795 ORTHO05D005518 3.0e-21 106.3 127 53.5
RcHm_v2.0_Chr2g0148201 Rosa chinensis HOM05D004795 ORTHO05D005518 3.9e-21 105.9 223 41.3
BcaB06g27183 Brassica carinata HOM05D004795 ORTHO05D005518 5.1e-21 105.5 232 37.9
unitig_32.g11886 Utricularia gibba HOM05D004795 ORTHO05D005518 8.7e-21 104.8 169 45.6
SalBow7G1622 Salvia bowleyana HOM05D004795 ORTHO05D005518 1.5e-20 104.0 112 57.1
SalBow7G4115 Salvia bowleyana HOM05D004795 ORTHO05D005518 1.5e-20 104.0 112 57.1
Phvul.004G066100 Phaseolus vulgaris HOM05D004795 ORTHO05D005518 3.3e-20 102.8 212 41.0
A04p11270 Brassica napus HOM05D004795 ORTHO05D005518 4.3e-20 102.4 230 39.1
BraA04t16787Z Brassica rapa HOM05D004795 ORTHO05D005518 4.3e-20 102.4 230 39.1
BraA02t06447Z Brassica rapa HOM05D004795 ORTHO05D005518 5.6e-20 102.1 231 37.2
BcaC02g09641 Brassica carinata HOM05D004795 ORTHO05D005518 2.1e-19 100.1 230 38.7
BolC4t26077H Brassica oleracea HOM05D004795 ORTHO05D005518 2.1e-19 100.1 230 38.7
FAN02G3195 Fragaria x ananassa HOM05D004795 ORTHO05D005518 2.8e-19 99.8 215 42.3
AUR62043981 Chenopodium quinoa HOM05D004795 ORTHO05D005518 3.7e-19 99.4 263 37.3
FAN05G2248 Fragaria x ananassa HOM05D004795 ORTHO05D005518 3.7e-19 99.4 218 42.2
FAN14G2363 Fragaria x ananassa HOM05D004795 ORTHO05D005518 3.7e-19 99.4 221 41.2
FAN14G5069 Fragaria x ananassa HOM05D004795 ORTHO05D005518 3.7e-19 99.4 221 41.2
Glyma.18G295700 Glycine max HOM05D004795 ORTHO05D005518 4.8e-19 99.0 192 42.7
Lj1g0003158 Lotus japonicus HOM05D004795 ORTHO05D005518 4.8e-19 99.0 176 46.6
THA.LOC104805574 Tarenaya hassleriana HOM05D004795 ORTHO05D005518 4.8e-19 99.0 231 38.1
FvH4_6g36230 Fragaria vesca HOM05D004795 ORTHO05D005518 1.1e-18 97.8 223 40.8
Gohir.A11G163900 Gossypium hirsutum HOM05D004795 ORTHO05D005518 1.4e-18 97.4 166 46.4
Gorai.007G182000 Gossypium raimondii HOM05D004795 ORTHO05D005518 1.4e-18 97.4 165 45.5
Thhalv10027906m.g Eutrema salsugineum HOM05D004795 ORTHO05D005518 1.8e-18 97.1 233 38.2
THA.LOC104822635 Tarenaya hassleriana HOM05D004795 ORTHO05D005518 1.8e-18 97.1 232 38.8
Aa31LG9G17140 Aethionema arabicum HOM05D004795 ORTHO05D005518 2.4e-18 96.7 231 39.0
HanXRQChr11g0325401 Helianthus annuus HOM05D004795 ORTHO05D005518 3.1e-18 96.3 186 42.5
Gohir.D12G053200 Gossypium hirsutum HOM05D004795 ORTHO05D005518 4.0e-18 95.9 189 43.4
SalBow5G0757 Salvia bowleyana HOM05D004795 ORTHO05D005518 4.0e-18 95.9 85 64.7
BcaB05g24226 Brassica carinata HOM05D004795 ORTHO05D005518 5.3e-18 95.5 229 33.6
ECA232G0641 Erigeron canadensis HOM05D000072 ORTHO05D000026 6.9e-18 95.1 121 54.5
Gohir.A12G054400 Gossypium hirsutum HOM05D004795 ORTHO05D005518 9.0e-18 94.7 176 42.0
Ca_08078_v3 Cicer arietinum L. HOM05D004795 ORTHO05D005518 1.2e-17 94.4 189 40.7
Gorai.008G056400 Gossypium raimondii HOM05D004795 ORTHO05D005518 2.6e-17 93.2 188 41.0
Lalb_Chr10g0091311 Lupinus albus HOM05D004795 ORTHO05D005518 2.6e-17 93.2 188 40.4
Potri.004G098200 Populus trichocarpa HOM05D004795 ORTHO05D005518 2.6e-17 93.2 132 51.5
AUR62023290 Chenopodium quinoa HOM05D004795 ORTHO05D005518 3.4e-17 92.8 104 59.6
C04p44990 Brassica napus HOM05D004795 ORTHO05D005518 4.5e-17 92.4 234 37.6
FAN09G4185 Fragaria x ananassa HOM05D004795 ORTHO05D005518 5.8e-17 92.0 193 43.0
Carub.0005s1274 Capsella rubella HOM05D004795 ORTHO05D005518 7.6e-17 91.7 208 38.5
Lalb_Chr02g0158191 Lupinus albus HOM05D004795 ORTHO05D005518 1.0e-16 91.3 200 38.0
A07p33770 Brassica napus HOM05D004795 ORTHO05D005518 1.7e-16 90.5 224 33.5
Actinidia15890 Actinidia chinensis HOM05D004795 ORTHO05D005518 2.2e-16 90.1 172 40.1
AUR62009011 Chenopodium quinoa HOM05D004795 ORTHO05D005518 2.2e-16 90.1 109 56.0
unitig_748.g8746 Utricularia gibba HOM05D004795 ORTHO05D005518 2.2e-16 90.1 119 48.7
Sp7g03720 Schrenkiella parvula HOM05D004795 ORTHO05D005518 2.9e-16 89.7 227 36.1
BcaC03g14785 Brassica carinata HOM05D004795 ORTHO05D005518 3.8e-16 89.4 216 36.1
Aa31LG2G3430 Aethionema arabicum HOM05D004795 ORTHO05D005518 4.9e-16 89.0 230 35.7
BolC2t08386H Brassica oleracea HOM05D004795 ORTHO05D005518 8.4e-16 88.2 226 35.4
AT5G38300 Arabidopsis thaliana HOM05D004795 ORTHO05D005518 1.9e-15 87.0 222 36.0
CARHR214290 Cardamine hirsuta HOM05D004795 ORTHO05D005518 2.5e-15 86.7 210 37.6
Lj2g0010000 Lotus japonicus HOM05D004795 ORTHO05D005518 3.2e-15 86.3 223 38.6
Ah.06g188560 Amaranthus hybridus HOM05D004795 ORTHO05D005518 7.1e-15 85.1 157 39.5
C02p22330 Brassica napus HOM05D004795 ORTHO05D005518 9.3e-15 84.7 176 37.5
Carub.0002s1332 Capsella rubella HOM05D004795 ORTHO05D005518 9.3e-15 84.7 217 36.4
Sp5g21970 Schrenkiella parvula HOM05D004795 ORTHO05D005518 9.3e-15 84.7 239 34.7
AL2G25370 Arabidopsis lyrata HOM05D004795 ORTHO05D005518 1.2e-14 84.3 183 37.7
AL7G52500 Arabidopsis lyrata HOM05D004795 ORTHO05D005518 1.2e-14 84.3 249 32.1
Thhalv10019032m.g Eutrema salsugineum HOM05D004795 ORTHO05D005518 1.2e-14 84.3 249 34.1
Gorai.007G356700 Gossypium raimondii HOM05D004795 ORTHO05D005518 1.2e-14 84.3 167 40.1
AT1G67035 Arabidopsis thaliana HOM05D004795 ORTHO05D005518 2.1e-14 83.6 224 34.8
BraA07t31003Z Brassica rapa HOM05D004795 ORTHO05D005518 3.5e-14 82.8 229 34.9
Psat3g098240 Pisum sativum HOM05D004795 ORTHO05D005518 3.5e-14 82.8 178 39.3
TPR.G31528 Trifolium pratense HOM05D004795 ORTHO05D005518 7.9e-14 81.6 195 36.9
Gorai.001G202200 Gossypium raimondii HOM05D004795 ORTHO05D005518 1.0e-13 81.3 138 43.5
BolC6t39123H Brassica oleracea HOM05D004795 ORTHO05D005518 2.3e-13 80.1 226 33.2
Aqoxy3G00247 Aquilegia oxysepala HOM05D004795 ORTHO05D005518 5.1e-13 79.0 242 33.5
MBI09_g36997_MAGBIO Magnolia biondii HOM05D004795 ORTHO05D005518 1.5e-12 77.4 218 35.3
Medtr7g082230 Medicago truncatula HOM05D004795 ORTHO05D005518 1.9e-12 77.0 176 35.2
Gohir.D11G170200 Gossypium hirsutum HOM05D004795 ORTHO05D005518 4.3e-12 75.9 106 50.9
CAN.G358.61 Capsicum annuum HOM05D004795 ORTHO05D005518 1.3e-11 74.3 92 51.1
Medtr6g018780 Medicago truncatula HOM05D004795 ORTHO05D005518 2.8e-11 73.2 123 42.3
PSO541G1476 Papaver somniferum HOM05D004795 ORTHO05D005518 3.7e-11 72.8 154 37.0
BcaNung06250 Brassica carinata HOM05D004795 ORTHO05D005518 4.8e-11 72.4 203 33.5
C06p43160 Brassica napus HOM05D004795 ORTHO05D005518 4.8e-11 72.4 229 30.6
CARHR059450 Cardamine hirsuta HOM05D004795 ORTHO05D005518 2.4e-10 70.1 179 37.4
PSO532G0010 Papaver somniferum HOM05D004795 ORTHO05D005518 3.1e-10 69.7 154 35.1
TPR.G32442 Trifolium pratense HOM05D004795 ORTHO05D005518 9.0e-10 68.2 330 27.6
Psat1g081000 Pisum sativum HOM05D004795 ORTHO05D005518 2.0e-09 67.0 263 30.0
SalBow3G3444 Salvia bowleyana HOM05D004795 ORTHO05D005518 2.0e-09 67.0 51 70.6
PSO541G4271 Papaver somniferum HOM05D004795 ORTHO05D005518 1.0e-08 64.7 153 34.6
ATR0752G028 Amborella trichopoda HOM05D004795 ORTHO05D005518 6.5e-08 62.0 194 30.4
Gohir.D11G325975 Gossypium hirsutum HOM05D004795 ORTHO05D005518 2.5e-07 60.1 81 45.7
CAN.G1425.14 Capsicum annuum HOM05D004795 ORTHO05D005518 7.2e-07 58.5 61 52.5


User provided reference genes

Program Settings