Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu050349.1 Olea europaea HOM05D004311 ORTHO05D005145 9.1e-165 584.3 527 100.0
Oeu007717.1 Olea europaea HOM05D004311 ORTHO05D005145 1.3e-62 245.0 500 42.2
Actinidia35905 Actinidia chinensis HOM05D004311 ORTHO05D005145 1.4e-19 102.1 170 41.2
MSTRG.20570 Avicennia marina HOM05D004311 ORTHO05D005145 1.4e-19 102.1 143 42.7
Rhsim09G0031800 Rhododendron simsii HOM05D004311 ORTHO05D005145 1.8e-19 101.7 148 43.2
Solyc09g098560.2 Solanum lycopersicum HOM05D004311 ORTHO05D005145 5.4e-16 90.1 149 36.9
Sopen09g036480 Solanum pennellii HOM05D004311 ORTHO05D005145 5.4e-16 90.1 149 36.9
vmacro00590 Vaccinium macrocarpon HOM05D004311 ORTHO05D005145 3.5e-15 87.4 154 41.6
Ciclev10019191m.g Citrus clementina HOM05D004311 ORTHO05D005145 6.0e-15 86.7 162 38.9
PGSC0003DMG400021611 Solanum tuberosum HOM05D004311 ORTHO05D005145 7.8e-15 86.3 148 36.5
CSS0021437 Camellia sinensis var. sinensis HOM05D004311 ORTHO05D005145 2.3e-14 84.7 150 38.7
Nitab4.5_0004962g0030 Nicotiana tabacum HOM05D004311 ORTHO05D005145 3.0e-14 84.3 136 36.0
Lj6A60T47 Lonicera japonica HOM05D004311 ORTHO05D005145 3.9e-14 84.0 185 36.8
GSVIVG01013563001 Vitis vinifera HOM05D004311 ORTHO05D005145 5.1e-14 83.6 144 35.4
MSTRG.21993 Avicennia marina HOM05D004311 ORTHO05D005145 3.3e-13 80.9 124 45.2
FAN17G0085 Fragaria x ananassa HOM05D004311 ORTHO05D005145 3.3e-13 80.9 144 37.5
PGR083G0820 Punica granatum HOM05D004311 ORTHO05D005145 4.3e-13 80.5 136 41.2
CAN.G710.65 Capsicum annuum HOM05D004311 ORTHO05D005145 5.6e-13 80.1 127 40.9
FvH4_4g11290 Fragaria vesca HOM05D004311 ORTHO05D005145 1.2e-12 79.0 142 35.9
FAN07G0445 Fragaria x ananassa HOM05D004311 ORTHO05D005145 1.2e-12 79.0 142 38.0
Dinv22688 Davidia involucrata HOM05D004311 ORTHO05D005145 2.1e-12 78.2 172 36.0
SalBow3G3821 Salvia bowleyana HOM05D004311 ORTHO05D005145 2.1e-12 78.2 115 41.7
Migut.G01038 Erythranthe guttata HOM05D004311 ORTHO05D005145 3.6e-12 77.4 88 46.6
Prupe.1G188800 Prunus persica HOM05D004311 ORTHO05D005145 8.1e-12 76.3 159 34.0
Cfa015780 Carpinus fangiana HOM05D004311 ORTHO05D005145 1.1e-11 75.9 146 37.7
Haze_00714 Corylus avellana HOM05D004311 ORTHO05D005145 1.1e-11 75.9 146 39.0
QL10p045440 Quercus lobata HOM05D004311 ORTHO05D005145 1.8e-11 75.1 145 37.9
Sc19g0002150 Simmondsia chinensis HOM05D004311 ORTHO05D005145 3.1e-11 74.3 121 36.4
Nitab4.5_0006710g0020 Nicotiana tabacum HOM05D004311 ORTHO05D005145 5.2e-11 73.6 154 31.2
CANSAT01G2758 Cannabis sativa HOM05D004311 ORTHO05D005145 6.8e-11 73.2 144 36.8
Nitab4.5_0001049g0080 Nicotiana tabacum HOM05D004311 ORTHO05D005145 6.8e-11 73.2 129 38.0
SGA_v2.0_scaffold12G06156 Striga asiatica HOM05D004311 ORTHO05D005145 6.8e-11 73.2 90 44.4
Atru.chr5.2612 Acer truncatum HOM05D004311 ORTHO05D005145 8.9e-11 72.8 165 33.3
RcHm_v2.0_Chr4g0407521 Rosa chinensis HOM05D004311 ORTHO05D005145 8.9e-11 72.8 148 37.8
Peaxi162Scf00319g00915 Petunia axillaris HOM05D004311 ORTHO05D005145 2.6e-10 71.2 113 38.1
Lsat_1_v5_gn_6_54900 Lactuca sativa HOM05D004311 ORTHO05D005145 3.4e-10 70.9 114 36.0
HanXRQChr07g0186701 Helianthus annuus HOM05D004311 ORTHO05D005145 5.8e-10 70.1 106 44.3
Thecc.04G184200 Theobroma cacao HOM05D004311 ORTHO05D005145 7.6e-10 69.7 163 34.4
CANSAT78G0609 Cannabis sativa HOM05D004311 ORTHO05D005145 9.9e-10 69.3 141 35.5
Migut.N03111 Erythranthe guttata HOM05D004311 ORTHO05D005145 1.3e-09 68.9 130 39.2
Hma1.2p1_0429F.1_g151120 Hydrangea macrophylla HOM05D004311 ORTHO05D005145 1.3e-09 68.9 70 51.4
Atru.chr3.1596 Acer truncatum HOM05D004311 ORTHO05D005145 2.9e-09 67.8 142 35.2
Cc03_g13030 Coffea canephora HOM05D004311 ORTHO05D005145 3.8e-09 67.4 94 42.6
TWI60G0507 Tripterygium wilfordii HOM05D004311 ORTHO05D005145 6.4e-09 66.6 135 36.3
Gohir.D10G132100 Gossypium hirsutum HOM05D004311 ORTHO05D005145 8.4e-09 66.2 138 34.8
Gorai.011G145800 Gossypium raimondii HOM05D004311 ORTHO05D005145 8.4e-09 66.2 138 35.5
Eucgr.A00251 Eucalyptus grandis HOM05D004311 ORTHO05D005145 1.1e-08 65.9 166 34.9
Gohir.A10G134400 Gossypium hirsutum HOM05D004311 ORTHO05D005145 1.1e-08 65.9 138 34.8
DCAR_028443 Daucus carota HOM05D004311 ORTHO05D005145 3.2e-08 64.3 115 35.7
CiPaw.01G102900 Carya illinoinensis HOM05D004311 ORTHO05D005145 1.2e-07 62.4 156 34.0
Manes.11G116001 Manihot esculenta HOM05D004311 ORTHO05D005145 1.6e-07 62.0 174 34.5
Hund12225 Selenicereus undatus HOM05D004311 ORTHO05D005145 1.6e-07 62.0 61 52.5
AUR62030033 Chenopodium quinoa HOM05D004311 ORTHO05D005145 2.1e-07 61.6 125 34.4
unitig_8.g3035 Utricularia gibba HOM05D004311 ORTHO05D005145 2.1e-07 61.6 96 39.6
AUR62002610 Chenopodium quinoa HOM05D004311 ORTHO05D005145 2.7e-07 61.2 123 35.8
Potri.007G124150 Populus trichocarpa HOM05D004311 ORTHO05D005145 2.7e-07 61.2 153 35.3
Duzib151G0942 Durio zibethinus HOM05D004311 ORTHO05D005145 1.0e-06 59.3 136 35.3
EL10Ac3g06308 Beta vulgaris HOM05D004311 ORTHO05D005145 1.3e-06 58.9 130 33.1
Ah.13g074370 Amaranthus hybridus HOM05D004311 ORTHO05D005145 2.3e-06 58.2 132 33.3
DCAR_005511 Daucus carota HOM05D004311 ORTHO05D005145 5.1e-06 57.0 47 59.6
CsaV3_4G003570 Cucumis sativus L. HOM05D004311 ORTHO05D005145 6.6e-06 56.6 138 31.9
THA.LOC104821356 Tarenaya hassleriana HOM05D004311 ORTHO05D005145 8.7e-06 56.2 126 28.6


User provided reference genes

Program Settings