Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu050282.1 Olea europaea HOM05D000384 ORTHO05D006260 1.0e-68 263.5 148 100.0
Oeu031225.1 Olea europaea HOM05D000384 ORTHO05D006260 6.7e-65 250.8 148 90.5
Oeu031229.1 Olea europaea HOM05D000384 ORTHO05D006260 6.7e-65 250.8 148 90.5
Dinv44537 Davidia involucrata HOM05D000384 ORTHO05D000468 1.8e-57 226.1 141 81.6
Migut.N00188 Erythranthe guttata HOM05D000384 ORTHO05D006260 3.0e-57 225.3 144 79.9
Glyma.06G316000 Glycine max HOM05D000384 ORTHO05D006260 1.2e-56 223.4 148 78.4
Glyma.13G124100 Glycine max HOM05D000384 ORTHO05D006260 1.2e-56 223.4 148 78.4
Phvul.008G161600 Phaseolus vulgaris HOM05D000384 ORTHO05D006260 1.2e-56 223.4 148 77.7
GSVIVG01017982001 Vitis vinifera HOM05D000384 ORTHO05D006260 2.0e-56 222.6 146 80.1
Glyma.05G087300 Glycine max HOM05D000384 ORTHO05D006260 4.4e-56 221.5 148 77.7
SGA_v2.0_scaffold522G52709 Striga asiatica HOM05D000384 ORTHO05D006260 4.4e-56 221.5 148 78.4
MSTRG.24739 Avicennia marina HOM05D000384 ORTHO05D006260 5.7e-56 221.1 148 77.0
VMungo0720G1921 Vigna mungo HOM05D000384 ORTHO05D006260 5.7e-56 221.1 146 77.4
Lalb_Chr19g0132471 Lupinus albus HOM05D000384 ORTHO05D006260 9.7e-56 220.3 145 77.9
Gohir.A10G210600 Gossypium hirsutum HOM05D000384 ORTHO05D006260 6.3e-55 217.6 145 76.6
TPR.G25531 Trifolium pratense HOM05D000384 ORTHO05D006260 6.3e-55 217.6 148 75.0
Gohir.D10G218900 Gossypium hirsutum HOM05D000384 ORTHO05D006260 8.2e-55 217.2 145 76.6
Gorai.011G245600 Gossypium raimondii HOM05D000384 ORTHO05D006260 8.2e-55 217.2 145 76.6
TAR636G3061 Trochodendron aralioides HOM05D000384 ORTHO05D006260 8.2e-55 217.2 147 75.5
COL.COLO4_10907 Corchorus olitorius HOM05D000384 ORTHO05D006260 1.1e-54 216.9 145 75.9
Duzib128G1753 Durio zibethinus HOM05D000384 ORTHO05D006260 1.4e-54 216.5 143 76.9
Psat0s3755g0120 Pisum sativum HOM05D000384 ORTHO05D006260 1.4e-54 216.5 148 74.3
arahy.Tifrunner.gnm1.ann1.JHWM2T Arachis hypogaea HOM05D000384 ORTHO05D006260 1.8e-54 216.1 146 76.7
arahy.Tifrunner.gnm1.ann1.U3DZXE Arachis hypogaea HOM05D000384 ORTHO05D006260 1.8e-54 216.1 146 76.7
Haze_00893 Corylus avellana HOM05D000384 ORTHO05D006260 1.8e-54 216.1 147 76.2
Hma1.2p1_0745F.1_g212050 Hydrangea macrophylla HOM05D000384 ORTHO05D006260 1.8e-54 216.1 143 78.3
CSS0025710 Camellia sinensis var. sinensis HOM05D000384 ORTHO05D006260 2.4e-54 215.7 146 76.7
Ca_14031_v3 Cicer arietinum L. HOM05D000384 ORTHO05D006260 2.4e-54 215.7 148 74.3
Thecc.10G059100 Theobroma cacao HOM05D000384 ORTHO05D006260 2.4e-54 215.7 143 76.9
Cfa015651 Carpinus fangiana HOM05D000384 ORTHO05D006260 3.1e-54 215.3 148 77.0
CSS0048526 Camellia sinensis var. sinensis HOM05D000384 ORTHO05D006260 4.1e-54 214.9 146 76.0
Manes.03G178300 Manihot esculenta HOM05D000384 ORTHO05D006260 5.3e-54 214.5 141 77.3
Medtr3g007250 Medicago truncatula HOM05D000384 ORTHO05D006260 5.3e-54 214.5 148 73.6
arahy.Tifrunner.gnm1.ann1.T2NEZJ Arachis hypogaea HOM05D000384 ORTHO05D006260 7.0e-54 214.2 146 76.0
TWI09G1519 Tripterygium wilfordii HOM05D000384 ORTHO05D006260 7.0e-54 214.2 147 74.1
Nitab4.5_0007368g0020 Nicotiana tabacum HOM05D000384 ORTHO05D006260 2.0e-53 212.6 140 77.1
CSS0003915 Camellia sinensis var. sinensis HOM05D000384 ORTHO05D006260 2.7e-53 212.2 146 76.0
CiPaw.02G097700 Carya illinoinensis HOM05D000384 ORTHO05D006260 3.5e-53 211.8 147 73.5
Lj3g0015206 Lotus japonicus HOM05D000384 ORTHO05D006260 3.5e-53 211.8 140 75.7
Nitab4.5_0007474g0030 Nicotiana tabacum HOM05D000384 ORTHO05D006260 3.5e-53 211.8 140 77.9
Actinidia40142 Actinidia chinensis HOM05D000384 ORTHO05D006260 4.5e-53 211.5 145 75.9
Potri.001G240200 Populus trichocarpa HOM05D000384 ORTHO05D006260 4.5e-53 211.5 145 74.5
Atru.chr4.720 Acer truncatum HOM05D000384 ORTHO05D006260 5.9e-53 211.1 147 74.8
arahy.Tifrunner.gnm1.ann1.K8JXLT Arachis hypogaea HOM05D000384 ORTHO05D006260 5.9e-53 211.1 142 76.8
QL06p002227 Quercus lobata HOM05D000384 ORTHO05D006260 1.0e-52 210.3 146 72.6
Hund25029 Selenicereus undatus HOM05D000384 ORTHO05D006260 1.0e-52 210.3 143 77.6
Duzib114G0643 Durio zibethinus HOM05D000384 ORTHO05D006260 1.3e-52 209.9 143 75.5
FAN07G0857 Fragaria x ananassa HOM05D000384 ORTHO05D006260 1.3e-52 209.9 147 74.1
Potri.008G153900 Populus trichocarpa HOM05D000384 ORTHO05D006260 1.3e-52 209.9 145 74.5
Sc19g0004110 Simmondsia chinensis HOM05D000384 ORTHO05D006260 1.3e-52 209.9 146 74.0
EL10Ac4g08427 Beta vulgaris HOM05D000384 ORTHO05D006260 1.7e-52 209.5 145 73.1
CANSAT64G0565 Cannabis sativa HOM05D000384 ORTHO05D006260 2.2e-52 209.1 146 74.7
Cc03_g03830 Coffea canephora HOM05D000384 ORTHO05D006260 2.2e-52 209.1 139 78.4
Sabra08G0117400 Salix brachista HOM05D000384 ORTHO05D006260 2.2e-52 209.1 144 73.6
Nn3g18529 Nelumbo nucifera HOM05D000384 ORTHO05D006260 3.8e-52 208.4 143 73.4
Prupe.1G014300 Prunus persica HOM05D000384 ORTHO05D006260 3.8e-52 208.4 147 74.1
CiPaw.01G166600 Carya illinoinensis HOM05D000384 ORTHO05D006260 5.0e-52 208.0 147 73.5
MD16G1194400 Malus domestica HOM05D000384 ORTHO05D006260 8.5e-52 207.2 145 74.5
Peaxi162Scf00579g00001 Petunia axillaris HOM05D000384 ORTHO05D006260 8.5e-52 207.2 140 75.7
Cpa.g.sc58.101 Carica papaya HOM05D000384 ORTHO05D006260 1.5e-51 206.5 139 75.5
PGSC0003DMG400016332 Solanum tuberosum HOM05D000384 ORTHO05D006260 1.5e-51 206.5 140 75.0
Atru.chr4.2459 Acer truncatum HOM05D000384 ORTHO05D006260 1.9e-51 206.1 147 71.4
MBI11_g07539_MAGBIO Magnolia biondii HOM05D000384 ORTHO05D006260 1.9e-51 206.1 143 72.0
RcHm_v2.0_Chr1g0362551 Rosa chinensis HOM05D000384 ORTHO05D006260 1.9e-51 206.1 140 75.7
RcHm_v2.0_Chr4g0387021 Rosa chinensis HOM05D000384 ORTHO05D006260 1.9e-51 206.1 140 75.7
FvH4_4g15650 Fragaria vesca HOM05D000384 ORTHO05D006260 2.5e-51 205.7 140 76.4
FAN12G1863 Fragaria x ananassa HOM05D000384 ORTHO05D006260 2.5e-51 205.7 140 76.4
FAN17G0123 Fragaria x ananassa HOM05D000384 ORTHO05D006260 2.5e-51 205.7 140 75.7
PSO210G4801 Papaver somniferum HOM05D000384 ORTHO05D006260 3.2e-51 205.3 141 73.0
SalBow3G1001 Salvia bowleyana HOM05D000384 ORTHO05D006260 3.2e-51 205.3 135 80.7
TWI53G0398 Tripterygium wilfordii HOM05D000384 ORTHO05D006260 3.2e-51 205.3 148 73.0
CAN.G1280.23 Capsicum annuum HOM05D000384 ORTHO05D006260 5.5e-51 204.5 138 76.8
AUR62019660 Chenopodium quinoa HOM05D000384 ORTHO05D006260 5.5e-51 204.5 146 71.9
FAN22G1586 Fragaria x ananassa HOM05D000384 ORTHO05D006260 7.2e-51 204.1 140 74.3
PSO832G3877 Papaver somniferum HOM05D000384 ORTHO05D006260 9.4e-51 203.8 141 72.3
unitig_699.g19994 Utricularia gibba HOM05D000384 ORTHO05D006260 9.4e-51 203.8 143 74.8
Rhsim04G0201900 Rhododendron simsii HOM05D000384 ORTHO05D006260 1.2e-50 203.4 145 73.1
Sabra16G0144900 Salix brachista HOM05D000384 ORTHO05D006260 1.2e-50 203.4 144 71.5
Zm00001eb114150 Zea mays HOM05D000384 ORTHO05D006260 1.2e-50 203.4 142 73.2
Ciclev10006154m.g Citrus clementina HOM05D000384 ORTHO05D006260 2.1e-50 202.6 146 71.2
MELO3C022017.2 Cucumis melo HOM05D000384 ORTHO05D006260 2.1e-50 202.6 146 72.6
Sc13g0004430 Simmondsia chinensis HOM05D000384 ORTHO05D006260 2.1e-50 202.6 142 70.4
ClCG05G005160 Citrullus lanatus HOM05D000384 ORTHO05D006260 3.6e-50 201.8 146 71.9
Eucgr.H03463 Eucalyptus grandis HOM05D000384 ORTHO05D006260 3.6e-50 201.8 135 74.8
Aqoxy1G01533 Aquilegia oxysepala HOM05D000384 ORTHO05D006260 4.7e-50 201.4 140 73.6
Aqoxy5G00465 Aquilegia oxysepala HOM05D000384 ORTHO05D006260 4.7e-50 201.4 140 73.6
CsaV3_5G038350 Cucumis sativus L. HOM05D000384 ORTHO05D006260 4.7e-50 201.4 146 71.9
DCAR_027219 Daucus carota HOM05D000384 ORTHO05D006260 6.1e-50 201.1 142 74.6
Lj3E734T1 Lonicera japonica HOM05D000384 ORTHO05D006260 6.1e-50 201.1 143 74.1
RcHm_v2.0_Chr4g0416141 Rosa chinensis HOM05D000384 ORTHO05D006260 6.1e-50 201.1 140 74.3
AUR62013951 Chenopodium quinoa HOM05D000384 ORTHO05D006260 8.0e-50 200.7 139 74.1
DCAR_024164 Daucus carota HOM05D000384 ORTHO05D006260 8.0e-50 200.7 142 74.6
CAN.G136.5 Capsicum annuum HOM05D000384 ORTHO05D006260 1.4e-49 199.9 147 73.5
Sopen06g018540 Solanum pennellii HOM05D000384 ORTHO05D006260 1.8e-49 199.5 140 74.3
Zm00001eb415970 Zea mays HOM05D000384 ORTHO05D006260 3.0e-49 198.7 142 69.7
ATR0083G069 Amborella trichopoda HOM05D000384 ORTHO05D006260 4.0e-49 198.4 148 75.0
THA.LOC104803028 Tarenaya hassleriana HOM05D000384 ORTHO05D006260 8.8e-49 197.2 147 68.7
PGR004G2612 Punica granatum HOM05D000384 ORTHO05D006260 1.2e-48 196.8 142 71.1
ECA247G4089 Erigeron canadensis HOM05D000384 ORTHO05D006260 4.4e-48 194.9 141 71.6
Os12g0485800 Oryza sativa ssp. japonica HOM05D000384 ORTHO05D006260 4.4e-48 194.9 140 71.4
HanXRQChr08g0229211 Helianthus annuus HOM05D000384 ORTHO05D006260 5.7e-48 194.5 145 71.0
Lsat_1_v5_gn_9_18461 Lactuca sativa HOM05D000384 ORTHO05D006260 9.8e-48 193.7 135 74.1
Os11g0568500 Oryza sativa ssp. japonica HOM05D000384 ORTHO05D006260 9.8e-48 193.7 143 69.9
Sed0018578 Sechium edule HOM05D000384 ORTHO05D006260 9.8e-48 193.7 143 70.6
THA.LOC104822267 Tarenaya hassleriana HOM05D000384 ORTHO05D006260 2.8e-47 192.2 147 67.3
CARHR098380 Cardamine hirsuta HOM05D000384 ORTHO05D006260 7.0e-46 187.6 151 67.5
Aa31LG8G9040 Aethionema arabicum HOM05D000384 ORTHO05D006260 1.6e-45 186.4 147 66.0
BcaC01g03444 Brassica carinata HOM05D000384 ORTHO05D006260 4.5e-45 184.9 140 66.4
C03p52530 Brassica napus HOM05D000384 ORTHO05D006260 7.7e-45 184.1 140 66.4
Thhalv10021707m.g Eutrema salsugineum HOM05D000384 ORTHO05D006260 7.7e-45 184.1 150 65.3
BolC3t17522H Brassica oleracea HOM05D000384 ORTHO05D006260 2.3e-44 182.6 140 65.7
BraA03t13424Z Brassica rapa HOM05D000384 ORTHO05D006260 2.9e-44 182.2 142 67.6
BcaC05g28063 Brassica carinata HOM05D000384 ORTHO05D006260 3.8e-44 181.8 139 67.6
A03p42770 Brassica napus HOM05D000384 ORTHO05D006260 3.8e-44 181.8 143 67.1
C05p40760 Brassica napus HOM05D000384 ORTHO05D006260 3.8e-44 181.8 139 67.6
BolC5t32821H Brassica oleracea HOM05D000384 ORTHO05D006260 3.8e-44 181.8 139 67.6
AT3G22480 Arabidopsis thaliana HOM05D000384 ORTHO05D006260 1.9e-43 179.5 150 64.7
BcaB06g26358 Brassica carinata HOM05D000384 ORTHO05D006260 1.9e-43 179.5 136 66.2
A05p26280 Brassica napus HOM05D000384 ORTHO05D006260 1.9e-43 179.5 139 65.5
BcaB04g19201 Brassica carinata HOM05D000384 ORTHO05D006260 4.2e-43 178.3 138 63.0
BraA05t21503Z Brassica rapa HOM05D000384 ORTHO05D006260 5.5e-43 177.9 134 67.2
Solyc06g053460.3 Solanum lycopersicum HOM05D000384 ORTHO05D006260 9.5e-43 177.2 125 75.2
Ah.04g163960 Amaranthus hybridus HOM05D000384 ORTHO05D006260 2.8e-42 175.6 142 69.0
SEGI_35673 Sequoiadendron giganteum HOM05D000384 ORTHO05D006260 2.8e-42 175.6 141 63.1
Sp3g20250 Schrenkiella parvula HOM05D000384 ORTHO05D006260 3.6e-42 175.3 150 69.3
TAR365G0396 Trochodendron aralioides HOM05D000384 ORTHO05D006260 4.7e-42 174.9 118 77.1
C05p40680 Brassica napus HOM05D000384 ORTHO05D006260 4.0e-41 171.8 147 63.9
BolC5t32807H Brassica oleracea HOM05D000384 ORTHO05D006260 4.0e-41 171.8 147 63.9
Carub.0003s2264 Capsella rubella HOM05D000384 ORTHO05D006260 1.2e-40 170.2 150 62.7
AL3G36790 Arabidopsis lyrata HOM05D000384 ORTHO05D006260 1.5e-40 169.9 150 62.7
HanXRQChr04g0103741 Helianthus annuus HOM05D000384 ORTHO05D006260 2.6e-40 169.1 117 74.4
Mapoly0049s0105 Marchantia polymorpha HOM05D000384 ORTHO05D006260 1.8e-38 162.9 145 60.7
AagrBONN_evm.TU.Sc2ySwM_344.1360 Anthoceros agrestis HOM05D000384 ORTHO05D006260 1.3e-36 156.8 138 55.8
SMO169G0080 Selaginella moellendorffii HOM05D000384 ORTHO05D006260 3.3e-35 152.1 147 55.8
CBR_g42063 Chara braunii HOM05D000384 ORTHO05D006260 5.2e-33 144.8 135 57.0
HPP92_018608 Vanilla planifolia HOM05D000384 ORTHO05D006260 1.2e-32 143.7 132 56.8
Pp3c23_10300 Physcomitrium patens HOM05D000384 ORTHO05D006260 2.0e-29 132.9 139 53.2
AagrBONN_evm.TU.Sc2ySwM_228.3583 Anthoceros agrestis HOM05D000384 ORTHO05D006260 2.5e-27 125.9 120 50.8
Hma1.2p1_0602F.1_g187390 Hydrangea macrophylla HOM05D000384 ORTHO05D006260 6.2e-26 121.3 109 64.2
Pp3c24_3120 Physcomitrium patens HOM05D000384 ORTHO05D006260 2.0e-24 116.3 140 47.1
BcaC05g28047 Brassica carinata HOM05D000384 ORTHO05D006260 4.9e-23 111.7 95 64.2
HPP92_018610 Vanilla planifolia HOM05D000384 ORTHO05D006260 1.1e-22 110.5 88 64.8
MCO05G108 Micromonas commoda HOM05D000384 ORTHO05D006260 1.7e-20 103.2 130 40.8
Cre07.g342250 Chlamydomonas reinhardtii HOM05D000384 ORTHO05D006260 3.1e-17 92.4 138 38.4
CDE09G0159 Ceratophyllum demersum HOM05D000384 ORTHO05D006260 1.6e-13 80.1 48 81.2
PRCOL_00004688 Prasinoderma coloniale HOM05D000384 ORTHO05D006260 6.0e-13 78.2 87 47.1


User provided reference genes

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