Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu050268.1 Olea europaea HOM05D005489 ORTHO05D006629 8.5e-47 189.9 89 100.0
Oeu032962.1 Olea europaea HOM05D005489 ORTHO05D006629 2.2e-34 148.7 76 90.8
BcaB03g13640 Brassica carinata HOM05D005489 ORTHO05D006629 3.2e-30 134.8 88 71.6
BcaC05g27681 Brassica carinata HOM05D005489 ORTHO05D006629 3.2e-30 134.8 88 71.6
A05p23180 Brassica napus HOM05D005489 ORTHO05D006629 3.2e-30 134.8 88 71.6
C05p36630 Brassica napus HOM05D005489 ORTHO05D006629 3.2e-30 134.8 88 71.6
BraA05t21185Z Brassica rapa HOM05D005489 ORTHO05D006629 3.2e-30 134.8 88 71.6
CARHR034780 Cardamine hirsuta HOM05D005489 ORTHO05D006629 5.5e-30 134.0 88 69.3
Aqoxy5G02479 Aquilegia oxysepala HOM05D005489 ORTHO05D006629 7.2e-30 133.7 76 82.9
AL1G51120 Arabidopsis lyrata HOM05D005489 ORTHO05D006629 7.2e-30 133.7 88 70.5
AT1G36980 Arabidopsis thaliana HOM05D005489 ORTHO05D006629 7.2e-30 133.7 88 70.5
BcaC05g27682 Brassica carinata HOM05D005489 ORTHO05D006629 7.2e-30 133.7 76 80.3
C05p36640 Brassica napus HOM05D005489 ORTHO05D006629 7.2e-30 133.7 76 80.3
Carub.0001s3388 Capsella rubella HOM05D005489 ORTHO05D006629 7.2e-30 133.7 88 71.6
Thhalv10005115m.g Eutrema salsugineum HOM05D005489 ORTHO05D006629 9.4e-30 133.3 88 70.5
Sp1g31180 Schrenkiella parvula HOM05D005489 ORTHO05D006629 9.4e-30 133.3 88 70.5
Ciclev10002818m.g Citrus clementina HOM05D005489 ORTHO05D006629 1.2e-29 132.9 76 80.3
TAR197G0004 Trochodendron aralioides HOM05D005489 ORTHO05D006629 1.6e-29 132.5 76 80.3
Aa31LG6G9070 Aethionema arabicum HOM05D005489 ORTHO05D006629 2.1e-29 132.1 88 69.3
CANSAT25G2554 Cannabis sativa HOM05D005489 ORTHO05D006629 2.1e-29 132.1 79 78.5
COL.COLO4_32811 Corchorus olitorius HOM05D005489 ORTHO05D006629 2.7e-29 131.7 76 81.6
Nn1g08538 Nelumbo nucifera HOM05D005489 ORTHO05D006629 2.7e-29 131.7 76 78.9
Hma1.2p1_0221F.1_g093180 Hydrangea macrophylla HOM05D005489 ORTHO05D006629 3.6e-29 131.3 76 81.6
Lsat_1_v5_gn_4_135561 Lactuca sativa HOM05D005489 ORTHO05D006629 3.6e-29 131.3 76 80.3
MD15G1359200 Malus domestica HOM05D005489 ORTHO05D006629 4.7e-29 131.0 88 71.6
Nitab4.5_0000051g0120 Nicotiana tabacum HOM05D005489 ORTHO05D006629 6.1e-29 130.6 76 81.6
Nitab4.5_0002332g0020 Nicotiana tabacum HOM05D005489 ORTHO05D006629 6.1e-29 130.6 76 81.6
Prupe.1G506000 Prunus persica HOM05D005489 ORTHO05D006629 6.1e-29 130.6 88 70.5
THA.LOC104806808 Tarenaya hassleriana HOM05D005489 ORTHO05D006629 6.1e-29 130.6 88 70.5
ATR0121G008 Amborella trichopoda HOM05D005489 ORTHO05D006629 1.0e-28 129.8 76 77.6
MBI06_g01046_MAGBIO Magnolia biondii HOM05D005489 ORTHO05D006629 1.0e-28 129.8 76 78.9
PGR044G1289 Punica granatum HOM05D005489 ORTHO05D006629 1.0e-28 129.8 76 78.9
PGSC0003DMG400027793 Solanum tuberosum HOM05D005489 ORTHO05D006629 1.0e-28 129.8 76 78.9
GSVIVG01008943001 Vitis vinifera HOM05D005489 ORTHO05D006629 1.0e-28 129.8 76 77.6
Atru.chr13.1318 Acer truncatum HOM05D005489 ORTHO05D006629 1.4e-28 129.4 76 77.6
Atru.chr13.1362 Acer truncatum HOM05D005489 ORTHO05D006629 1.4e-28 129.4 76 77.6
Cfa015959 Carpinus fangiana HOM05D005489 ORTHO05D006629 1.4e-28 129.4 77 79.2
Nn5g27958 Nelumbo nucifera HOM05D005489 ORTHO05D006629 1.4e-28 129.4 76 78.9
Dinv27383 Davidia involucrata HOM05D005489 ORTHO05D006629 1.8e-28 129.0 76 78.9
Sc01g0001550 Simmondsia chinensis HOM05D005489 ORTHO05D006629 1.8e-28 129.0 76 77.6
Sopen11g008580 Solanum pennellii HOM05D005489 ORTHO05D006629 1.8e-28 129.0 76 77.6
SGA_v2.0_scaffold118G32436 Striga asiatica HOM05D005489 ORTHO05D006629 1.8e-28 129.0 76 78.9
THA.LOC104813132 Tarenaya hassleriana HOM05D005489 ORTHO05D006629 1.8e-28 129.0 88 70.5
Thecc.08G116800 Theobroma cacao HOM05D005489 ORTHO05D006629 1.8e-28 129.0 76 77.6
Gohir.A01G187700 Gossypium hirsutum HOM05D005489 ORTHO05D006629 2.3e-28 128.6 76 76.3
Gohir.A02G075000 Gossypium hirsutum HOM05D005489 ORTHO05D006629 2.3e-28 128.6 76 76.3
BolC5t32398H Brassica oleracea HOM05D005489 ORTHO05D006629 3.0e-28 128.3 94 67.0
Dinv26716 Davidia involucrata HOM05D005489 ORTHO05D006629 3.0e-28 128.3 76 77.6
Migut.C01190 Erythranthe guttata HOM05D005489 ORTHO05D006629 3.0e-28 128.3 76 77.6
Migut.N03320 Erythranthe guttata HOM05D005489 ORTHO05D006629 3.0e-28 128.3 76 78.9
Gohir.D02G082100 Gossypium hirsutum HOM05D005489 ORTHO05D006629 3.0e-28 128.3 76 76.3
Haze_00523 Corylus avellana HOM05D005489 ORTHO05D006629 4.0e-28 127.9 76 78.9
Manes.18G073000 Manihot esculenta HOM05D005489 ORTHO05D006629 4.0e-28 127.9 76 77.6
Rhsim06G0109100 Rhododendron simsii HOM05D005489 ORTHO05D006629 4.0e-28 127.9 76 78.9
RcHm_v2.0_Chr7g0240921 Rosa chinensis HOM05D005489 ORTHO05D006629 4.0e-28 127.9 76 77.6
Solyc11g013550.2 Solanum lycopersicum HOM05D005489 ORTHO05D006629 4.0e-28 127.9 76 76.3
SGA_v2.0_scaffold24G10504 Striga asiatica HOM05D005489 ORTHO05D006629 4.0e-28 127.9 76 77.6
PSO017G5790 Papaver somniferum HOM05D005489 ORTHO05D006629 5.2e-28 127.5 76 77.6
PSO170G3859 Papaver somniferum HOM05D005489 ORTHO05D006629 5.2e-28 127.5 76 77.6
SalBow1G3581 Salvia bowleyana HOM05D005489 ORTHO05D006629 5.2e-28 127.5 76 78.9
TAR628G1556 Trochodendron aralioides HOM05D005489 ORTHO05D006629 6.7e-28 127.1 76 76.3
DCAR_023128 Daucus carota HOM05D005489 ORTHO05D006629 8.8e-28 126.7 72 79.2
Duzib041G0073 Durio zibethinus HOM05D005489 ORTHO05D006629 8.8e-28 126.7 76 76.3
HanXRQChr11g0326271 Helianthus annuus HOM05D005489 ORTHO05D006629 8.8e-28 126.7 76 76.3
arahy.Tifrunner.gnm1.ann1.204R5H Arachis hypogaea HOM05D005489 ORTHO05D006629 1.2e-27 126.3 76 77.6
arahy.Tifrunner.gnm1.ann1.64ZY3M Arachis hypogaea HOM05D005489 ORTHO05D006629 1.2e-27 126.3 76 77.6
DCAR_014792 Daucus carota HOM05D005489 ORTHO05D006629 1.2e-27 126.3 76 76.3
Glyma.04G253700 Glycine max HOM05D005489 ORTHO05D006629 1.2e-27 126.3 76 77.6
Gohir.A06G041000 Gossypium hirsutum HOM05D005489 ORTHO05D006629 1.2e-27 126.3 76 76.3
Gohir.D06G041900 Gossypium hirsutum HOM05D005489 ORTHO05D006629 1.2e-27 126.3 76 76.3
Gorai.002G220400 Gossypium raimondii HOM05D005489 ORTHO05D006629 1.2e-27 126.3 76 75.0
Gorai.010G047100 Gossypium raimondii HOM05D005489 ORTHO05D006629 1.2e-27 126.3 76 76.3
CiPaw.05G228700 Carya illinoinensis HOM05D005489 ORTHO05D006629 1.5e-27 125.9 76 76.3
HanXRQChr09g0260151 Helianthus annuus HOM05D005489 ORTHO05D006629 1.5e-27 125.9 76 76.3
Lj1g0000272 Lotus japonicus HOM05D005489 ORTHO05D006629 1.5e-27 125.9 76 77.6
Hund16821 Selenicereus undatus HOM05D005489 ORTHO05D006629 1.5e-27 125.9 88 68.2
TWI56G0906 Tripterygium wilfordii HOM05D005489 ORTHO05D006629 1.5e-27 125.9 76 75.0
VMungo1127G1458 Vigna mungo HOM05D005489 ORTHO05D006629 1.5e-27 125.9 76 76.3
FvH4_5g38950 Fragaria vesca HOM05D005489 ORTHO05D006629 2.0e-27 125.6 76 77.6
FAN04G1587 Fragaria x ananassa HOM05D005489 ORTHO05D006629 2.0e-27 125.6 76 77.6
FAN08G2064 Fragaria x ananassa HOM05D005489 ORTHO05D006629 2.0e-27 125.6 76 77.6
FAN13G3020 Fragaria x ananassa HOM05D005489 ORTHO05D006629 2.0e-27 125.6 76 77.6
FAN18G3455 Fragaria x ananassa HOM05D005489 ORTHO05D006629 2.0e-27 125.6 76 77.6
CAN.G255.20 Capsicum annuum HOM05D005489 ORTHO05D006629 2.6e-27 125.2 76 75.0
ClCG03G009110 Citrullus lanatus HOM05D005489 ORTHO05D006629 2.6e-27 125.2 76 76.3
MELO3C022783.2 Cucumis melo HOM05D005489 ORTHO05D006629 2.6e-27 125.2 76 76.3
CsaV3_5G023520 Cucumis sativus L. HOM05D005489 ORTHO05D006629 2.6e-27 125.2 76 76.3
Oeu043793.1 Olea europaea HOM05D005489 ORTHO05D006629 2.6e-27 125.2 88 64.8
QL12p035283 Quercus lobata HOM05D005489 ORTHO05D006629 2.6e-27 125.2 76 76.3
Sed0015736 Sechium edule HOM05D005489 ORTHO05D006629 2.6e-27 125.2 76 76.3
TAR127G0005 Trochodendron aralioides HOM05D005489 ORTHO05D006629 2.6e-27 125.2 76 76.3
CDE06G1809 Ceratophyllum demersum HOM05D005489 ORTHO05D006629 3.3e-27 124.8 76 75.0
Ca_25761_v3 Cicer arietinum L. HOM05D005489 ORTHO05D006629 4.4e-27 124.4 76 76.3
Medtr3g073300 Medicago truncatula HOM05D005489 ORTHO05D006629 4.4e-27 124.4 76 76.3
Peaxi162Scf01011g00023 Petunia axillaris HOM05D005489 ORTHO05D006629 4.4e-27 124.4 76 78.9
Phvul.011G165300 Phaseolus vulgaris HOM05D005489 ORTHO05D006629 4.4e-27 124.4 76 75.0
Psat5g135600 Pisum sativum HOM05D005489 ORTHO05D006629 4.4e-27 124.4 76 76.3
TPR.G32948 Trifolium pratense HOM05D005489 ORTHO05D006629 4.4e-27 124.4 76 76.3
Glyma.06G108600 Glycine max HOM05D005489 ORTHO05D006629 7.5e-27 123.6 76 76.3
Lalb_Chr11g0065701 Lupinus albus HOM05D005489 ORTHO05D006629 7.5e-27 123.6 76 76.3
Lalb_Chr08g0241711 Lupinus albus HOM05D005489 ORTHO05D006629 9.7e-27 123.2 76 76.3
MSTRG.1486 Avicennia marina HOM05D005489 ORTHO05D006629 1.3e-26 122.9 76 72.4
TWI12G0464 Tripterygium wilfordii HOM05D005489 ORTHO05D006629 1.7e-26 122.5 76 72.4
EL10Ac1g00039 Beta vulgaris HOM05D005489 ORTHO05D006629 2.2e-26 122.1 76 75.0
Sabra02G0070300 Salix brachista HOM05D005489 ORTHO05D006629 3.7e-26 121.3 76 73.7
Nn2g15248 Nelumbo nucifera HOM05D005489 ORTHO05D006629 4.8e-26 120.9 83 68.7
Duzib093G1687 Durio zibethinus HOM05D005489 ORTHO05D006629 6.3e-26 120.6 76 73.7
Potri.005G171901 Populus trichocarpa HOM05D005489 ORTHO05D006629 6.3e-26 120.6 76 72.4
ECA232G0625 Erigeron canadensis HOM05D005489 ORTHO05D006629 1.1e-25 119.8 72 79.2
Potri.002G089300 Populus trichocarpa HOM05D005489 ORTHO05D006629 1.1e-25 119.8 76 72.4
Cc10_g10440 Coffea canephora HOM05D005489 ORTHO05D006629 1.8e-25 119.0 76 78.9
unitig_747.g21477 Utricularia gibba HOM05D003597 ORTHO05D004420 1.8e-25 119.0 81 69.1
Gohir.D01G181900 Gossypium hirsutum HOM05D005489 ORTHO05D006629 4.1e-25 117.9 76 72.4
HPP92_002297 Vanilla planifolia HOM05D005489 ORTHO05D006629 5.9e-24 114.0 72 70.8
Os09g0453000 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 1.0e-23 113.2 78 69.2
Zm00001eb100550 Zea mays HOM05D005489 ORTHO05D006629 1.7e-23 112.5 78 67.9
SEGI_34511 Sequoiadendron giganteum HOM05D005489 ORTHO05D006629 2.2e-23 112.1 69 75.4
HPP92_005944 Vanilla planifolia HOM05D005489 ORTHO05D006629 5.0e-23 110.9 72 69.4
Zm00001eb244520 Zea mays HOM05D005489 ORTHO05D006629 5.0e-23 110.9 71 67.6
AagrBONN_evm.TU.Sc2ySwM_344.2049 Anthoceros agrestis HOM05D005489 ORTHO05D006629 7.2e-22 107.1 88 58.0
Pp3c1_10200 Physcomitrium patens HOM05D005489 ORTHO05D006629 7.2e-22 107.1 93 54.8
Actinidia29431 Actinidia chinensis HOM05D005489 ORTHO05D006629 9.4e-22 106.7 84 58.3
Os02g0566900 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 9.4e-22 106.7 72 63.9
Pp3c2_28270 Physcomitrium patens HOM05D005489 ORTHO05D006629 1.2e-21 106.3 93 55.9
SMO116G0262 Selaginella moellendorffii HOM05D005489 ORTHO05D006629 2.0e-19 99.0 81 56.8
CBR_g30829 Chara braunii HOM05D005489 ORTHO05D006629 5.7e-19 97.4 60 70.0
Mapoly0004s0020 Marchantia polymorpha HOM05D005489 ORTHO05D006629 9.8e-19 96.7 91 53.8
Eucgr.F04378 Eucalyptus grandis HOM05D005489 ORTHO05D006629 9.1e-17 90.1 47 80.9
Cre01.g042950 Chlamydomonas reinhardtii HOM05D005489 ORTHO05D006629 2.0e-11 72.4 60 53.3
SalBow7G1125 Salvia bowleyana HOM05D002998 ORTHO05D006629 1.4e-09 66.2 35 77.1
SalBow7G4082 Salvia bowleyana HOM05D005489 ORTHO05D006629 1.4e-09 66.2 35 77.1
Sabra05G0129400 Salix brachista HOM05D005489 ORTHO05D006629 6.6e-07 57.4 76 44.7
PRCOL_00003843 Prasinoderma coloniale HOM05D005489 ORTHO05D006629 3.3e-06 55.1 51 52.9


User provided reference genes

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